Gmor006064.1
Basic Information
- Insect
- Glossina morsitans
- Gene Symbol
- ttk
- Assembly
- None
- Location
- scf7180000640488:31933-41319[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3e-19 4.1e-16 57.9 0.0 2 45 329 373 328 373 0.97 2 2 5 6.8e+03 -3.6 1.8 3 12 406 415 406 419 0.83
Sequence Information
- Coding Sequence
- ATGTCCGTACAACAATTTTGTTTACGTTGGAATAATCATCAGCCGAATTTTATAGCGGTCTGCTCGACTTTACTGACGAGTGGTACGTTAGTCGACGTTACTTTAGCGGCCGAAGGTAGGCAACTACAAGCCCACAAAATTGTTCTCTCAGCTTGCAGCTCCTATTTTCAGACACTTTTTACAACGAATCCATGCCAGCATCCCATTGTTATATTAAAGGATGTACAATATGATGATCTTAAAACTATGGTTGATTTTATGTACTATGGTGAAGTAAACGTTTCACAAGAGCAATTACCGCACATTTTAAAAACGGCGGAGATGCTTAAAATAAAAGGACTCGCCGAAATGCCCACCGATCCTGCTAATTTAACTAAGTCCGATAGTAAATCGTCAAACGATGCAACCGAATTGGTTGGTGGTGCTGGCATAGGTGGTGCTAGTGGAAGTAACGGTGCGACTGGTAATAATAGCGGAAATGGAAATAGTGGAAGTTCTGGAGAACGTGTCAATTCCGAAGATCAGCACAATCCATCTTTAGATGCGGCAACGACGGGGGGTTTAACGCTTTCACAAATGAGCCAGATGTCATTTGGGGGAAATGCTGGAAATAGTGGTCTTGGTGGTCTAGCTGCCCATCCTTTACATACGGCGAAATTACTTAAAGAAGCCTCTAACAATGATATGGAAACACATCCCCAAGATTCGGATAGTTTGGATGATGCACACGGTCATGTACATATGCAAATTAAACCTGAAGTTGACATCAGTGGCGTACAACAGTCAATACCATTAGATATATCTGGGGCTACAACGCCTTCAGAACATGATGCTCCTAACACGCAATCTGCTCATTCGGGACCTACGCCCACTCAATCGCCGGTAGGTAACGCGTCTGCGGGTAGTAGTTCCAATAACATGTCTACAAGTAATTCAAATAACAGTGCCAGTGTGAAACGTAAACGATCTGTTAATCCACAAGGCGATGAGAACTTCATACGCGCTTTGGAAGCAGTGCGTTCGGGTGGTATCGGTTTTTGTAAGGCTGCAAAACTGTATGGTGTCAATAATCGCACGCTATGGTTAGAATATAAGAAACGGGGCTATCCCGTATCTCGACCGAGTATAAAGTCACGTGTCGTCAAACAAGAACCGAATTTGTCGCCGTCACCTACACCGCCTGCTAACACTGCCGATGATACAAATGAAAATTATGAACATATGGCGGCAGCTGTCGCGGCTGCACAAACTGCCGCTCTTAATATGCAAATACCACCGACTTCTGATACGCCGACACCTTCGTTAATGTGCACACCTCACCATGCCGGCACAACGGCTAGTGCTGGCACTCATCCTACAATGATGAGTTTTCTCGACACACGACACATTGACTTTCCTCCCAGTCTGCACTCCATGTCAAGACAACGATACATTGATGCCACAGGCGCGAGTGGGGGTCCCGGTGCGGGCACTATCAATGTAAATCCTGCCGCTGCCATGAATTTACAGAGTATTAACTTCAATTCGATATAG
- Protein Sequence
- MSVQQFCLRWNNHQPNFIAVCSTLLTSGTLVDVTLAAEGRQLQAHKIVLSACSSYFQTLFTTNPCQHPIVILKDVQYDDLKTMVDFMYYGEVNVSQEQLPHILKTAEMLKIKGLAEMPTDPANLTKSDSKSSNDATELVGGAGIGGASGSNGATGNNSGNGNSGSSGERVNSEDQHNPSLDAATTGGLTLSQMSQMSFGGNAGNSGLGGLAAHPLHTAKLLKEASNNDMETHPQDSDSLDDAHGHVHMQIKPEVDISGVQQSIPLDISGATTPSEHDAPNTQSAHSGPTPTQSPVGNASAGSSSNNMSTSNSNNSASVKRKRSVNPQGDENFIRALEAVRSGGIGFCKAAKLYGVNNRTLWLEYKKRGYPVSRPSIKSRVVKQEPNLSPSPTPPANTADDTNENYEHMAAAVAAAQTAALNMQIPPTSDTPTPSLMCTPHHAGTTASAGTHPTMMSFLDTRHIDFPPSLHSMSRQRYIDATGASGGPGAGTINVNPAAAMNLQSINFNSI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00749045;
- 90% Identity
- iTF_00749045;
- 80% Identity
- iTF_00749045;