Gmor010069.1
Basic Information
- Insect
- Glossina morsitans
- Gene Symbol
- -
- Assembly
- None
- Location
- scf7180000647319:16006-39199[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 2.2e-11 3.1e-08 32.7 0.0 1 38 272 310 272 315 0.89 2 4 6.8e-14 9.3e-11 40.8 0.1 2 39 327 364 326 367 0.94 3 4 5.6e-17 7.6e-14 50.6 0.0 1 45 381 426 381 426 0.97 4 4 7.7e-20 1.1e-16 59.8 0.0 1 45 433 478 433 478 0.97
Sequence Information
- Coding Sequence
- ATGACTAGTTTAGGCATGGGCATGAATGGCGGCATTTTAGGAGTACCGATGGGCTTTTTGGACTTCGCTCCTGAACCCCCAGCACCTTCAGCCACTCCTGTCACTGTTACTGAACACGTAGATCTGTCTTGTAACCCTAGTACAGATACAAGAGATCTATCGAACCCCTCAGAACCGTTAGATATCGATAATCATTTAGCTCAGCATATGATACAGCGGCTCGATCAATCACCCATGCATACCAtacatcatcagaccggtgatgaatccaattcgaatcttgtgcagcatatcaaaagcgaggtaatagaagccaagcaacaacaggtgcaacaacagcaacaacagcagcagcaacaagctgccgctgccgctcatcatcaggcccagcaacagcatttacatgctcaacagctggcagccgcccaagggcaagctcatcaacaacaacagcaagttcatcagcagcaacaacagcaacagcaggctcatcagcaacatcaacagcaggctgcagctcatcagcatcatcaacagcaacagcaacagACCCACCAAGAAATTACAGGAGCCACGGTGATGGAAATTGATCCGAGCCAAATTAAACATGAACCCGGCATGATAATAACACCGGAAATTGTGAATATGATGACTACTGGGCATATGGACATGTACAATTCCGACACGAGCGATGATTCAATGATGATTGCTAATGGTTCACCCCACGATCAAAATGAACCCCATTACACGAATTTAGATCAACAACAGCATGGTGGCGAACTCAAAGGTCAGTTTAATGGTCCCAAAACTTGGACACAAGATGATATGAATTCAGCTTTAGATGCTCTAAAGAATCAAAATATGAGTCTGACGAAGGCCTCCGTTACATACGGCATCCCCTCAACTACACTGTGGCAGCGTGCTCATCGTATGGGCATTGAAACGCCTAAAAAGGAGGGTGGTACAAAATCATGGAATGAAGATTCATTGAATAATGCCTTGGACGCGTTGCGTTCCGGACAAATATCGGCTAATAAAGCGTCTAAGGCCTACGGTATACCTTCCTCGACCTTATATAAAATTGCTCGACGTGAAGGCATACGCTTAGCGGCACCATTCAATGCAGCACCCACCACTTGGACTCAAGATGATTTGGATCGCGCCCTGGCGGCTATACGGGCCGGTCATACATCGGTACAGAAGGCAAGTGCTGAGTTTGGTATACCAACAGGCACTTTATACGGCCGCTGTAAACGTGAAGGTATAGAGCTATCAAGGTCAAATCCTACGCCTTGGTCCGAGGATGCTATGAATGAAGCCTTAAATTCAGTACGCGTGGGTCAAATGTCCATTAATCAAGCCGCTATAAATTATAATTTACCCTATAGTTCTCTGTATGGCCGATTTAAGCGAGGTAAATACGATGTCTCCAATGCCAGTGGCACATCACTGAATAACACCTCGGGCAATACATCAGCCAGCATTGAAATTATTGAACATAGTCAAGAGAATTCGCAACAGTTCCAGTATAGTCCATCGCCGCACCAATCGGGTCACGGTAGTAGTACACCGCAGCAGCAAACAGGCCAAACACCACAGCATATTCAACAGCATGTGGTGCATATACAGCAGCAACATCACCCTTCTCAACAGCAACATGGCCAGCACATTCAACAAGATGTTGTGGTTACATCAAGCAGTCAGCAACAGCAAGTGCATCAACATGGCGGCAGTTCAACAGCGGCCGGACAACAGCAGCAACAGCAAATCCAACAGATCTATCATCATCATAGCACACCCGAAAGGAGTTGA
- Protein Sequence
- MTSLGMGMNGGILGVPMGFLDFAPEPPAPSATPVTVTEHVDLSCNPSTDTRDLSNPSEPLDIDNHLAQHMIQRLDQSPMHTIHHQTGDESNSNLVQHIKSEVIEAKQQQVQQQQQQQQQQAAAAAHHQAQQQHLHAQQLAAAQGQAHQQQQQVHQQQQQQQQAHQQHQQQAAAHQHHQQQQQQTHQEITGATVMEIDPSQIKHEPGMIITPEIVNMMTTGHMDMYNSDTSDDSMMIANGSPHDQNEPHYTNLDQQQHGGELKGQFNGPKTWTQDDMNSALDALKNQNMSLTKASVTYGIPSTTLWQRAHRMGIETPKKEGGTKSWNEDSLNNALDALRSGQISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTTWTQDDLDRALAAIRAGHTSVQKASAEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMNEALNSVRVGQMSINQAAINYNLPYSSLYGRFKRGKYDVSNASGTSLNNTSGNTSASIEIIEHSQENSQQFQYSPSPHQSGHGSSTPQQQTGQTPQHIQQHVVHIQQQHHPSQQQHGQHIQQDVVVTSSSQQQQVHQHGGSSTAAGQQQQQQIQQIYHHHSTPERS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -