Gfus012272.1
Basic Information
- Insect
- Glossina fuscipes
- Gene Symbol
- nfxl1
- Assembly
- None
- Location
- Scaffold5:1263689-1280524[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 2 2e+04 -8.2 6.4 15 19 262 266 261 266 0.82 2 18 0.11 1.1e+03 -0.1 0.2 4 10 297 303 296 305 0.94 3 18 7.3e-08 0.00072 19.6 12.7 1 18 311 327 311 328 0.94 4 18 1.5 1.5e+04 -3.7 2.4 6 10 354 358 353 358 0.89 5 18 1.1e-06 0.01 15.9 17.5 1 19 364 383 364 383 0.97 6 18 0.48 4.7e+03 -2.1 2.3 6 10 408 412 407 412 0.90 7 18 4.1e-09 4.1e-05 23.6 12.4 1 19 418 436 418 436 0.99 8 18 1.7 1.7e+04 -3.9 0.8 6 10 461 465 460 467 0.54 9 18 3.8e-08 0.00038 20.5 12.3 1 18 471 488 471 489 0.96 10 18 0.74 7.3e+03 -2.7 0.4 1 5 498 502 498 507 0.73 11 18 2 2e+04 -5.0 2.3 5 10 512 517 512 517 0.91 12 18 8e-06 0.079 13.1 14.5 1 19 523 541 523 541 0.97 13 18 4.5e-10 4.4e-06 26.7 15.0 1 18 550 567 550 568 0.99 14 18 0.13 1.3e+03 -0.3 9.1 8 19 612 623 604 623 0.89 15 18 0.0065 64 3.8 6.6 1 12 635 645 635 645 0.96 16 18 0.0024 24 5.2 15.2 3 18 687 702 686 703 0.94 17 18 2 2e+04 -6.9 3.1 10 13 710 713 709 713 0.68 18 18 2e-06 0.02 15.0 11.7 1 16 754 768 754 774 0.86
Sequence Information
- Coding Sequence
- ATGGAGGAGATGGCGTCCTCTATGTTGTCCGCAGAAGCGGTTAACAACGTGTACAATATACCTACAGTTACGACTCAGGATGATGCATTGGCTTCGAATTCACGCTTACGTGGTAATAAACAATTTCCTATTGCCGGTAATAAGTCAAATGATAAGAACACTAGTCGAAAGTTTTATGAAGCACATGCTAAGAATTTAGAAGCTGCTAAAAAATTGGTGGATAAATACATTTCCTCATCTGAAGAGGAAGATGAATTGGATGAAACGAAAATCTTAATAGAGGATATGGAGGATATGGCGTCCTCTATGTTGTCCGCAGAAGCGGTTAACAACGTGCACAATATACCTACAGTTACGACTCAAGATGATGCATTGGCTTCGAATTCACGCTTATGTAAAGCTGCTAAAAAATTGGCGGATAAATACATTTCCCCATCTGAAGAGGAAGATGAATTGGATGAAACGAAAATCTTAAAAGCGCTATATAAGAATTATAGTGATCGTAAAGAAGACGAGCACTTATTAGCCAAGACTGCGAGTTTCTTAGAAAACATATTGCATTCCGGTTCAGCTACTTGCCTTATATGTATAGCTAGTGTAAAGAGGACGGACGCGATATGGTCGTGTAAACATTGTTATTGtttttttCACTTAAATTGTATACGTCGTTGGGCTAATGATAGCATGGCTCAGCGTAAAGCACAGGAACGCAACATTCAGGGCTGTTACAATCGCTTGGGTGAATATGTATCTCCCAAAAAAGAGAAAGCTTTACATTGGTGCTGCCCACAATGTAGGCGAGAATTTCAACCAAACGAAAAGCCTGCAACATACGAGTGCTTTTGCGGTAGAGAAACTGATCCCTTACCACAGCCATGGTTATTACCCCATTCTTGTGGCGAAATATGCGGTAAACTTTTACAGCCTAATTGCAGTCATAAATGCAATATACTCTGCCATTCAGGACCATGTCCACCGTGCGCTCAATATGCAATAACATCCTGCAAATGCGGAAAATCTCAGCCAAAGTCGATGCGCTGCTTAGAAAAAGATTGGGAATGTCAAGAAAAGTGCAATTCATTGTTGCCCTGCGGCCGACACAAGTGCCGTCAACCTTGCCATAAACCACAGCAGTGTCCACCTTGTAGTCAAAAAAGTATTCAAGCTTGTGAATGTGGAGCAGAATCGATGAGACGGCAATGCTGCGAACGGAAGTGGCAATGTCAACAGGTGTGTAGCAAATTGTATGCGTGCGGTATACACCTGTGTAAGAAAGTTTGTCATTCTGGGGACTGTGGTGAATGTCCACTCAGTTTGCCGCGTTCTTGTCCTTGTGGCAAAATTAAAAAAGTTGGACCTTGCACAGAAATTATTGATACTTGCGGAGACACTTGCCAAAAAATTCTTGCTTGCGGTCAACACACTTGCACCCAAAGGTGTCACACGGGCAATTGTAATTTGTGTCTAGTTATTACTAAGAAAAAATGTCGATGTGGTTTACATGAAAAGGAGCTGCCGTGTTCAAAGGAATTTACTTGTGAAACCAAATGCAAACAAAGCAGAGATTGCGGCATACATTCTTGCAACCGCAAGTGTTGCGATCGTAATTGTCCACCCTGTACTAAATTGTGCGGCCAACCATTATCCTGCGGTAAACATAAATGCCAATCGGTCTGTCATAGAGGTCCTTGTTATCCCTGTGGACAACAATCTCAAGTCAATTGCCGTTGGGGAAAGACGCGTAAAAGTGTACCGTGCGGAAGGGAACGTACCGTACGCATAGCATGCTTAGAGCATTGCAAAATACCTTCGAAATGTCATCACGTAAATCAGCACCGTTGCCATAAAAATGAGTGTCCATCTTGTTCGCAAATTTGTGGGTTACCAAATAATACTACAGGTTGTGGTCATATCTGCAAGGCCAAATGCCATAGCTATGTGAAGGTATCGAGTAAATCAAACTCGGAGACTGGCCATATTTGGGAGGCCAGCAAAAGGGCTCAACAAGGTTGTATGTCCTGCGAAAACGGTTGTAATATATCGCGACCTAATGGTTGCATCCATAATTGTCCTCGACCGTGTCATTTGCCACCTTGTAATCCCTGCAATGTAGCCATTAAAACAAAATGTCATTGTGGTCTGATGCAAATTATTTATAAATGCTGTGATTATTATAACAATCAAGGCGCTGTAACTGATATCGCTGAGCGGCAGGAACGTTTAAAAAGTTGCGGTAATCGCTGCTTAAAAAATTATTCTTGTGGCCATCGGTGCGCGGCACAATGCCACGCAGGGCCTTGCCCGGAAACTAATAATTGTCGCAAAAGATTACGCATTTACTGTGAGTGCAAACGTTTAAAACAAGAGATTTCTTGCGATAAACATCGCTCAGGGCTCACTAAATTGAAGTGTGATGCGAATTGTCTGGAAATCATCAAGAAGTCTGAAATGTCTCGTCATATGGCAGAGGAATCATTGCGTAAGCAAGAAGAAGAACGTAATCGATTAGAAGTGGAGCAATTTGAGAAACGATTTAATAAACGCAAACATAAAGAACGCAAATCAGTTGAACTAAAAGAAAAACGAGAGATCAACTGGAAATTGCTGTTCATGTACGCGGGCATCTTTTCAGCGATACTCTTGGCCGTGGGTCTGGCATTTTACGAAGATCATTAA
- Protein Sequence
- MEEMASSMLSAEAVNNVYNIPTVTTQDDALASNSRLRGNKQFPIAGNKSNDKNTSRKFYEAHAKNLEAAKKLVDKYISSSEEEDELDETKILIEDMEDMASSMLSAEAVNNVHNIPTVTTQDDALASNSRLCKAAKKLADKYISPSEEEDELDETKILKALYKNYSDRKEDEHLLAKTASFLENILHSGSATCLICIASVKRTDAIWSCKHCYCFFHLNCIRRWANDSMAQRKAQERNIQGCYNRLGEYVSPKKEKALHWCCPQCRREFQPNEKPATYECFCGRETDPLPQPWLLPHSCGEICGKLLQPNCSHKCNILCHSGPCPPCAQYAITSCKCGKSQPKSMRCLEKDWECQEKCNSLLPCGRHKCRQPCHKPQQCPPCSQKSIQACECGAESMRRQCCERKWQCQQVCSKLYACGIHLCKKVCHSGDCGECPLSLPRSCPCGKIKKVGPCTEIIDTCGDTCQKILACGQHTCTQRCHTGNCNLCLVITKKKCRCGLHEKELPCSKEFTCETKCKQSRDCGIHSCNRKCCDRNCPPCTKLCGQPLSCGKHKCQSVCHRGPCYPCGQQSQVNCRWGKTRKSVPCGRERTVRIACLEHCKIPSKCHHVNQHRCHKNECPSCSQICGLPNNTTGCGHICKAKCHSYVKVSSKSNSETGHIWEASKRAQQGCMSCENGCNISRPNGCIHNCPRPCHLPPCNPCNVAIKTKCHCGLMQIIYKCCDYYNNQGAVTDIAERQERLKSCGNRCLKNYSCGHRCAAQCHAGPCPETNNCRKRLRIYCECKRLKQEISCDKHRSGLTKLKCDANCLEIIKKSEMSRHMAEESLRKQEEERNRLEVEQFEKRFNKRKHKERKSVELKEKREINWKLLFMYAGIFSAILLAVGLAFYEDH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -