Basic Information

Gene Symbol
srp
Assembly
None
Location
Scaffold94:594190-626177[-]

Transcription Factor Domain

TF Family
zf-GATA
Domain
zf-GATA domain
PFAM
PF00320
TF Group
Zinc-Coordinating Group
Description
This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1e-18 5e-15 54.9 3.8 1 36 1047 1081 1047 1081 0.97

Sequence Information

Coding Sequence
atgaaatgttccactaaaaataatgcaaatattaaaacgaataaaagtgtagcgaataaagataaaaataaattgaaaGGTGTTACGGCAAAATCATTATTAACTAATGCGGCCAATATGAAAATCACTAAAGCTATAGCAAATTCAAAGCAAAATCGAAAAAATTTACATAAAGCATTAATAAATGGAGCCGAGTTGTTTACGgcaaatgaagcaaatgaagcTTCAATAAAAAGaacagcagcagcaacaataacaacaacaacagcaacagAGTGCTTTAATAAAAGCATTTGCAAGCGTAAGGAATTATATGAGAAGGATATTGAAGGGCAAAAGATTTCTTTTCATAATGAGCAAAGTCCATATCCAACGAAAATGCTTATAAGCAACGAATCTGAACCAATGACAATAGCGGGTTGTTTATTAAGTCGAAAAGAGATAGAATATAGACAAGAGCAAAGATCACCAATACCAATGCAAACGACAAATTCACCGCAATCGTCGTTGTCTTCTACTACAACAGCGGCAGCAGTaacaacaacaacaacaacaacaacaacaataacaGGTCTACTCAACGAGCAAATCGGTTCGGGGAGAGTACACCACTTTCATAATCACCACAATCACCATCAAaaccacaaccaacaacaacaacaacaacaacaacatcaacaacaacagcaacaacaCCAGGCATCAGAGTCGAGGTTCGCAGCAAATTTGAATTTATCGTTATTAGCTGGCAAGTCAGCAACGCTCCTATCAGTTGTCAACGAAACATCAAATCAGACAGTGTTACGTAGTACGACAATAACAAATACCACCGCCGAAGAAGATTCACAGCATATGAAAAACTTTCAATTAAATAAAAATGAAAAAGATACAGTGACGAATATTCATTTCGATACCGCAAAGTctacagttgcaattgatgctgctgctactgctgctgctgctgctgcgtctgctgttgataaacttcaagataattgtaacggtgacgtatgcgaagccgCTACCGCCGTGATAATTAATCGTCATCATACGCAAACAACTGATAAGGTTAATAAGTGTAATATCGAGAGCAATAATAGTCAAATAAATCGTAATGATAACAATAATTTGTCTGCAAAATCCGTGATAAATgcaacaacaacaacagcaacgacatcagcagcgacgacaaTTAGTGAAAATTATCAAGAAAAATTAGAAAACTGTGAAGAATTTGAGAAAACTTTAAACAATGAATTacaacaacaacaccaacaacaacCGGTAAATTATCGTGGTGTAAATAATACCGTAATTATAACAAattataatcataacgcgcaacaacagcatcatcataatcatcatcatcatcagcatcatcagcatcatcagcaacaacaacattccgataattcgtTTAGTGTACAAACAGTGGAATACGATTCACAAACGTCCAATATACTCAGTTCAACAAGTGATCCAAATCTTAATTTAGCGGTAATTGGAATTCCAACTCCGCAATCGGCTAATCAAAGCGCGCAACAATCCGTCACAAGTTCAGAACAATTACAAGAACATGCCCATCATTACTCGCATCAACCGTCCGTCGCCGATCAATGGTTGAATGTTTATAATAATTGTGCCTATGATTTATCATTAAATCATACTCAGTCGGTTAACGATCTTACAAGTCAATTATTGACATCGACTTTAACTCAGCTACAGCAGCACTCCCACcatcatcatcatcatcatcatACACATCCGCAAAATTTAGCATATTATCCGGCGCATTTAATTAATCCTGGCGCTGCGATTACTGCGGCTACGACATTAGCAAACGCTTCTTCTTATACGCTGCACGACGATACAATGCGTTCGAATACAACCCTTTATTCTACCTCTTATGCACCCACGGGTCATGAGCATTTGCATCAGCATACGCAATTAGTGGGCACGACACCCAATACACCGCACACTCCGACCAATATCGATGAAGTTATCCAGGATACACTGAAAGGTGAATGCTTAGACGATCATCACACTGCTGTCAGTTATTTAACAAATTTAAATTCAGTGGTCGATGCTCAAACATTAAAGGATACATATCATAGTGCAAATTTAGGCCATGAATTAAGTACGCTTACCGTAGTTGCTCCGGCTCATTTACAGTCGTCTTCCAATCACCTGCAAACCATACATCATTTACATCAAAATAATTCGGTTAGTTCGGGCGGTAATAGTCCATCACCCTCGTCAGCCTTATCGCAAACGGGCGATGTAGCAACTTTGCAAAGTTTTACCCAACTAACGAACGCTAATGCCAGCAGTCACCGCGATATTTACGGTTTATTAACCACCGATCAGAATTCAATGTCTTATTTTACATCGCCACCCAGTCCAGTACTGTCGCAAGGTTCAGCTTACGGTGGTTCGCTGGTAACAGCAGCAGCGAACAGTTTGCAATATAGTTTGCAATCAAGTGCAATAAATGGCGCTAGTTCGACATCACCTCATCAACATCATTCAACACCTACTTCATGCTCTCAGGCAGCGTCGAATGCTCAAAGCGTTAATAATTCGTTGGTGAAAAGGTCTGATGATTATGGTTCACCGAAAAGTAACAGTAGCAGTGTTGGCAGTGCCAGTGGCGGCGGAGGTGGAGGAGGTGCGTTACCTGCTTTCCAAAGAATAGCTTCCTCAACATACGGTGGCGCTGGTGGGGTAACTAATGGCGCCGAACGTTACACCTCATTGAGTAATTATAGAAGTCATAATGACACTTGGCCAAGTACGTACGAGACAATTAGCTATGCTCCCGCTTCGGTTGTTACCAGTCAAAGTCTAAATGGAGCTTTAAATGCCGTAAATACTAACGTCATCCGTTCTACAGTGAATGCACGCTCAGTTGCTACCTCTGAAAATAATTCTTTAGTAGCGACACCATTTCCAGCCGCTGCCTCTTTGTCAGcaaTGGCCGCTGAATCAGGCGGGGATTTCTATAAGACCTATCCGTTTACTACATCCGTTACAAATCGGACCAACACAACAAACAACTCAAATAACACTAACGAGGAACATGTTAGTCGTGCAACATCGCGACGATTGAGTGCTTCGAGACGTGCGGGCCTGGCCTGTTCAAATTGCTTAACGACGCAAACTTCATTGTGGCGTCGCAACGTTAACGGTGAACCCGTTTGCAATGCTTGCGGTCTTTACTATAAATTGCATAGCGTTAAGCGACCATTAACTATGAAGAAGGACACGATACAGACTCGTAAACGTAAACCCAAAGGCAGTAAATCGGAGAAAATATCTAAAAAACAAGCAGCAGCAAATGCGGCCGCTGCTGCCTCTGCCGTTATTTCGGATACTGCTTTGAATGGTGGTAATTCCAATACTAATACACTGAACGGTCTAAACGGAGATCAAGATATAACACAACATCACCAGCAGCAGACGCAATTAAATACATCGATATCATCATTAACACATTCAGCGGCTACATCACCCAATACAAACGGTTTGCCATCACCACCATTGTCAGCGACAAACATAAATCATAACAACAGCAATGACTTAACGGCCGCAATTATGTCGCCAACATCACCGTTACTGCAGGCAGCAACTAACTCAATAGACGTTGCAATAACAACGCAACGGGAGTTACATAagcaacagcaacctcagcaacaatcacaaagacaacagcaacaacaaatacaaaactatcaacaaatgtcaccgacaacaGCATCACTGCATCAAAATCTCAGTTCACCAAATACCATTATGTTtaataataacaacaacaataataataataacaataataataataattgtaataatcaatCTTCACCCAACACCAGCGCACATTTCAGTAATAATCATAGTGCAAGTAATCCAAATGATGCAGCATTTAACCATGACTCTGAGGAGAATGATAATGAAAATATGAAATTTATGCAAAAATATTTACAAACTCCTcatcatcaacaacagcaacagcagcagcatcaatcttcaacggatattgtgatgagcagtgcacaacgtcctcatacaacaatgataaatgcaagtcattcacccactaccataacgaaatcgccgacagtaacgacaaccttacaaatgcaatatttgcaacaacagcaacagcaacaacataacaatcatcatcagcaacagcaacagcaatcaccatcccaaactggtcaccatcaagtgaacaataatagcaacaacaataataataataatagcagcaacatacatttgttggtctccaatcaaagtcctttgcagaaaaattcaccgtccgtttcgccaccgaattatccgccatacgctgaattgatgtccccagatgctgaagcagcgggaattaaaattgaacaattgcatcacaatcatcatcttcatcagcatcagcaccagcatcagcatcagcaacaacaacaacaacagcaacagcatttattgcagcatcatgtgcaaataagtcgcagtccctccatagatgatgaatatgaatatcaacgtcagcaatttgtaatacatcagcaacaattacaacagcaacagcagcaacagcaacattttctgcaattacAAGGATTTGTGCCGCAGCATTTATACGATTTCGGACGAAAATTTGAAAGGGAAACAGTGGTGAAAATGGAATAA
Protein Sequence
MKCSTKNNANIKTNKSVANKDKNKLKGVTAKSLLTNAANMKITKAIANSKQNRKNLHKALINGAELFTANEANEASIKRTAAATITTTTATECFNKSICKRKELYEKDIEGQKISFHNEQSPYPTKMLISNESEPMTIAGCLLSRKEIEYRQEQRSPIPMQTTNSPQSSLSSTTTAAAVTTTTTTTTTITGLLNEQIGSGRVHHFHNHHNHHQNHNQQQQQQQQHQQQQQQHQASESRFAANLNLSLLAGKSATLLSVVNETSNQTVLRSTTITNTTAEEDSQHMKNFQLNKNEKDTVTNIHFDTAKSTVAIDAAATAAAAAASAVDKLQDNCNGDVCEAATAVIINRHHTQTTDKVNKCNIESNNSQINRNDNNNLSAKSVINATTTTATTSAATTISENYQEKLENCEEFEKTLNNELQQQHQQQPVNYRGVNNTVIITNYNHNAQQQHHHNHHHHQHHQHHQQQQHSDNSFSVQTVEYDSQTSNILSSTSDPNLNLAVIGIPTPQSANQSAQQSVTSSEQLQEHAHHYSHQPSVADQWLNVYNNCAYDLSLNHTQSVNDLTSQLLTSTLTQLQQHSHHHHHHHHTHPQNLAYYPAHLINPGAAITAATTLANASSYTLHDDTMRSNTTLYSTSYAPTGHEHLHQHTQLVGTTPNTPHTPTNIDEVIQDTLKGECLDDHHTAVSYLTNLNSVVDAQTLKDTYHSANLGHELSTLTVVAPAHLQSSSNHLQTIHHLHQNNSVSSGGNSPSPSSALSQTGDVATLQSFTQLTNANASSHRDIYGLLTTDQNSMSYFTSPPSPVLSQGSAYGGSLVTAAANSLQYSLQSSAINGASSTSPHQHHSTPTSCSQAASNAQSVNNSLVKRSDDYGSPKSNSSSVGSASGGGGGGGALPAFQRIASSTYGGAGGVTNGAERYTSLSNYRSHNDTWPSTYETISYAPASVVTSQSLNGALNAVNTNVIRSTVNARSVATSENNSLVATPFPAAASLSAMAAESGGDFYKTYPFTTSVTNRTNTTNNSNNTNEEHVSRATSRRLSASRRAGLACSNCLTTQTSLWRRNVNGEPVCNACGLYYKLHSVKRPLTMKKDTIQTRKRKPKGSKSEKISKKQAAANAAAAASAVISDTALNGGNSNTNTLNGLNGDQDITQHHQQQTQLNTSISSLTHSAATSPNTNGLPSPPLSATNINHNNSNDLTAAIMSPTSPLLQAATNSIDVAITTQRELHKQQQPQQQSQRQQQQQIQNYQQMSPTTASLHQNLSSPNTIMFNNNNNNNNNNNNNNNCNNQSSPNTSAHFSNNHSASNPNDAAFNHDSEENDNENMKFMQKYLQTPHHQQQQQQQHQSSTDIVMSSAQRPHTTMINASHSPTTITKSPTVTTTLQMQYLQQQQQQQHNNHHQQQQQQSPSQTGHHQVNNNSNNNNNNNSSNIHLLVSNQSPLQKNSPSVSPPNYPPYAELMSPDAEAAGIKIEQLHHNHHLHQHQHQHQHQQQQQQQQQHLLQHHVQISRSPSIDDEYEYQRQQFVIHQQQLQQQQQQQQHFLQLQGFVPQHLYDFGRKFERETVVKME

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-