Basic Information

Insect: Glossina fuscipes
Gene Symbol: grau_6
Assembly: None
Location: Scaffold356:291919-294439[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.36 29 5.5 4.8 2 23 255 277 254 277 0.96

2 10 0.032 2.6 8.8 1.2 6 23 286 303 286 303 0.99

3 10 0.0011 0.088 13.4 1.2 1 23 309 332 309 332 0.95

4 10 2.9e-05 0.0024 18.4 1.7 1 23 340 363 340 363 0.95

5 10 0.17 14 6.5 1.0 2 23 384 406 383 406 0.94

6 10 0.0052 0.42 11.3 0.1 6 23 415 432 415 432 0.99

7 10 0.00059 0.047 14.3 0.8 1 23 438 461 438 461 0.96

8 10 0.0083 0.67 10.7 0.4 1 23 469 492 469 492 0.91

9 10 0.061 5 7.9 0.8 2 21 498 517 497 518 0.95

10 10 0.66 53 4.7 1.2 3 23 522 542 520 542 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.36	29	5.5	4.8	2	23	255	277	254	277	0.96
2	10	0.032	2.6	8.8	1.2	6	23	286	303	286	303	0.99
3	10	0.0011	0.088	13.4	1.2	1	23	309	332	309	332	0.95
4	10	2.9e-05	0.0024	18.4	1.7	1	23	340	363	340	363	0.95
5	10	0.17	14	6.5	1.0	2	23	384	406	383	406	0.94
6	10	0.0052	0.42	11.3	0.1	6	23	415	432	415	432	0.99
7	10	0.00059	0.047	14.3	0.8	1	23	438	461	438	461	0.96
8	10	0.0083	0.67	10.7	0.4	1	23	469	492	469	492	0.91
9	10	0.061	5	7.9	0.8	2	21	498	517	497	518	0.95
10	10	0.66	53	4.7	1.2	3	23	522	542	520	542	0.95

Sequence Information

Coding Sequence: ATGATTTGTCGATTGTGTTTAAAAGAAGTTGATAAATACATCGCAGGCAATATACTGGATGTGTCGTATGTAATTGGAAAATATTTCTGGTTTGAGCTTCAACAAAACGACCCAATATCAGCAGCAATTTGTGATAATTGTTGGGGTAAAGTTTCTGATTTTCATGAGTTCTACAAAAGTATTGAAAAAGTTCATGGCAGGCTAAGCGAAAATGTTATAGTTAAAATTGAAAGCCCTGGTAAAGAACACGCTATAGAAAGTGTAATGATTCAATCATTTCCATTGTCAAGTAAAAAAGAATCTGATGATTATTACACCAAAGTTAATGACGAAGTTCCTTTTGATATGTTGATTGAGAGCATTGATGACAGTATTCGTAATCAAAGAATTGAAGATTCACGTGATATATTAGGAACCGAAAGTTTTGGTGCAAACGATTTAGAGGATGCTGATGGTGCCGCTACTTGCAAAGATGAAAAATATTGTAGCAATAGTGATAACTCATCTAATGTTGAAGATATCATGAAAGATGGAAAAGATAATAAGCTAACGAAAAAGAAGAAATTTACTAAATCCGTGAGAACAACTGCAACTAAGATTTCTTTGACCAGGTTGCGACaaaataatacggatggtaaaataaaatcagagaaaactcaaaaacgcaatttaaaaaaagcaaagaaatCACCGGAACAATCGAAAGCAGATAGTGACCAAAGTATAGCAATCGACGAAGAGATAGCAAAGTTTATGTCATTACATTGCGATTTGTGCAATTTCGCGGCTACGAATTTTTACTCCCTTCATAGCCATATGCACACAGAGCATAAAATCAAAGGTTACGTGAGATGTTGTAATAAGAAATTTTCCAAACGTTTCTTATTGCTGGATCACGTACGCCAACATTCAAATCCTGAGTGTTTCAAATGTGAACAATGTAATCGTGTGTATGCTGATCGCAATTCTATGCGCATTCATTTCCTCAGTAAACATAAAAAAGACGAAGATAAAATGTTTACTTGCTCTCAGTGCCCCAAAAAATTCTTTAGAAGATATTCCCTAAGACAGCATGAATTAGTTGGTCATAGTGATCACAAGAACGCATGTTTAGCCGTTGATGAAGAGATAGCAAAGTTTATGTCGCTGCATTGTGAACTATGCAAAACAGAAGCAAACAATTTTACAAGTCTTAAAGGTCATATGCGTGCTGAGCATAAAATCAAAGGTTATGTAAAATGTTGTAATAAAAAATTTCGTGAACGTGGTTTACTTGTTGAGCACATACGCGTACACTTCAATCCCGCCTGTTACAAATGTGAAGAATGCAGTCTTGTTTTTCCCGATCGACAATCTATGCGTAATCATTTCCTTATGAAACATCCAAAAGTCGAAGACAAGCCTTTTGCTTGTTCGCAGTGTTCCAACAAATTTGTTACAGTATATTTATTACAGCGACATAAAGCGCTCGCCCACAGTGATCAATCGAAAACTTGTAGCAGTTGTTGTAAGAGGTTTGACAGTGCAGCTCAGCTGTCTGCTCATATCAGAGAGCAGTGTTTGTGCGATACATGCGCGGAAGTTGTATGTGGGACTGTTGCCCTTCAACGCCACCTTCTAAAACATAAAAAGAGCTTTACTGAAGGAAAGGAAACTGAAATTCCTGATATTTCTAACAAGACATCACCTAGTCAACAAGGCAAATCAATTCGTAAATCCTGCGTTCTCAATTCTTTAAGTACAAGTGAATGCAATACGCCATCTGTGCACGAAAAGTTTCCATTACAATGTCAATATGCCGTTGCATCACAAGAAAATTGA
Protein Sequence: MICRLCLKEVDKYIAGNILDVSYVIGKYFWFELQQNDPISAAICDNCWGKVSDFHEFYKSIEKVHGRLSENVIVKIESPGKEHAIESVMIQSFPLSSKKESDDYYTKVNDEVPFDMLIESIDDSIRNQRIEDSRDILGTESFGANDLEDADGAATCKDEKYCSNSDNSSNVEDIMKDGKDNKLTKKKKFTKSVRTTATKISLTRLRQNNTDGKIKSEKTQKRNLKKAKKSPEQSKADSDQSIAIDEEIAKFMSLHCDLCNFAATNFYSLHSHMHTEHKIKGYVRCCNKKFSKRFLLLDHVRQHSNPECFKCEQCNRVYADRNSMRIHFLSKHKKDEDKMFTCSQCPKKFFRRYSLRQHELVGHSDHKNACLAVDEEIAKFMSLHCELCKTEANNFTSLKGHMRAEHKIKGYVKCCNKKFRERGLLVEHIRVHFNPACYKCEECSLVFPDRQSMRNHFLMKHPKVEDKPFACSQCSNKFVTVYLLQRHKALAHSDQSKTCSSCCKRFDSAAQLSAHIREQCLCDTCAEVVCGTVALQRHLLKHKKSFTEGKETEIPDISNKTSPSQQGKSIRKSCVLNSLSTSECNTPSVHEKFPLQCQYAVASQEN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00747040; iTF_00750048;
90% Identity: -
80% Identity: -