Basic Information

Insect: Glossina fuscipes
Gene Symbol: -
Assembly: None
Location: Scaffold211:300951-304331[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 4.1 3.3e+02 2.2 1.5 2 23 117 139 116 139 0.90

2 7 1.3e-07 1e-05 25.8 0.6 1 23 539 562 539 562 0.98

3 7 1.5e-06 0.00012 22.5 0.6 1 23 567 589 567 589 0.99

4 7 0.00017 0.014 15.9 1.6 1 23 595 618 595 618 0.89

5 7 0.00052 0.042 14.4 1.7 1 23 624 646 624 646 0.99

6 7 3.9e-05 0.0031 18.0 3.6 3 23 654 674 653 674 0.97

7 7 0.00059 0.047 14.3 0.7 1 23 680 703 680 703 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	4.1	3.3e+02	2.2	1.5	2	23	117	139	116	139	0.90
2	7	1.3e-07	1e-05	25.8	0.6	1	23	539	562	539	562	0.98
3	7	1.5e-06	0.00012	22.5	0.6	1	23	567	589	567	589	0.99
4	7	0.00017	0.014	15.9	1.6	1	23	595	618	595	618	0.89
5	7	0.00052	0.042	14.4	1.7	1	23	624	646	624	646	0.99
6	7	3.9e-05	0.0031	18.0	3.6	3	23	654	674	653	674	0.97
7	7	0.00059	0.047	14.3	0.7	1	23	680	703	680	703	0.97

Sequence Information

Coding Sequence: ATGACGGACATAAGCGCAGACATCGCTAATGAACAAAATCGCCGCCTCAAGGCGGAATTGGAAGCCATGAAGAAAGAACTTGACGAATATCGAAAGCCTGCAGTGTTGGATGAAGCTGACGGCGGAGCGCGAAAAAACGATGTCGTAGAGAAGCTGAGTTTCCGCGACAAAGTCGTCCAGATGAGCTTCGGCGAAATTCATTCAAACGGGATGACAATATACAATAAAGAGGAGAACAAATTCGAAGAATGCGGTTACCAACATGGTACACCTCAAAAGAAAATAGAGGCAGAAATGATAATTTGTGGCAATATTCTAGTGGATTTTAAAAGTAATAAATTCCTGTTAAAGTGCATACTGTGTGaaaaaaaaTCTCGCTTGTATAGAGATTTTGTAAAACATATTAAAAATAAACATAAACATGAAACTTCACCGCTACCGCAACAAAAAGAAGAAGTTAAGTTAGAATGCGAGCAACAGCAGCAACAAGATGAAGATGAGCTGAGTACTAAAGGTGATGTGAGTGTGAACATGAATGCGGATATGGATAAACATCCATTAGCGGAAATTGAAATAAAACCGCCAGAGTCTGAATTGGCACAAGAGGAGGACAGCATTGACTTTATTCCGATCGGAATTCCGATGGGCATGCCAGAGGATTCGGAAGATGATATTAAAGACGAAGTTGAAGATGAGCaagaatttatgccagaagatgaagaatttataccagacgagatggaatttgatacagacgatAACGACAACGATGATGAAGAACAAAATGAGGATGAGAGTTCGGATAATTTAGACGTGCCTGCTTATACAGAGAAAtttatccctacattttttagaaaaaaacgttttttaaatgatttCATTGATTTATATAAAACACAGCAGTGTTTATGGAACATTAATGATCCTTTATTCGAAAATGAAGAAGCACGCCAACAGGCTAAGAAAGCCATCGTAAAGGGTATGCAAAAGTTTAATGTCTATATGAAAGATAAAAACTTACATAAGGCTTTGGATAAATTGCACAGATTGTGCGCTGGTATCAAACAAAATTTCGATGATCCAAATCCGAAGAAAATTCCCAGTGTAGCCAAGGAATATTATAAGAGATGTGAATTCCTTAACGAACTTATCGAAAGAAAGAAAATCTCCAAAACTGATCAAATGATGAAAAAGGCTTTAAACTTCCAACATTACGACTTGGCCACCGTCAATTTTATTGATTGCTATGCGAATTATCCCATTTTCTACGATGGACGGCACGAATACCACAACAGTCTAGAGGAACGCCAAAGATCCTTAGAGGAACTGGCCAGCAATTTATCCTCACAATACGATATTTCTTTAAATGACGACGAACTTCTCAAGGCAATTGATCAATTTCAAGCTTGGTTTTACAGAATGGGCAAACGTTTTAAAAGTaaaaaaaCAAAACCTTCAAAGGCGGATGAAATATATTTTCAAAAGTGTAAAATATTTATGCCAGATGAACCAGCCAAAAAAGGCATAAACTGTGGCTATTGTGACAAGATATACTTATGTGTAAATACCTTAAGAGTTCACCATTATAAGGATCACCAAGTTGGTGAACTGCCTTTCAAATGCGAACAGTGTGGGCGTACCTTTGACCAGAATTCCTCATTAACTGTGCATATCCAAAGAGCCCATGTTGGAAAAGTATATCAATGCGAATATTGCGAACGACGTTTTGCAGTTAAATCGGATCTCAACGTTCACAAGCGCATTCATACAGCCGAAAAACCGCATGTCTGCGAACATTGCGGCAAATCGTTTAGACTCCGTAGCCAGTTAGGATATCATGTAACTGCCATTCATACGAAAATACGAGCATTTAAATGCACTATGTGCCCGAAGGATTTTTTGAAAAAACGCGACTTGACCGATCATGTCAAAACACATTTCAACATACGCGATAAAATCTGCGAGACCTGTGGCAAAGGTTTTTCCAATTGTCATTCGTTGATCAGACATCGACAAATACATTCGGAAATCCGAAAGTTTGCCTGTAAATTATGTGATGCTAAATTTAAGCAATTTGTCGGCCTTAACGGTCACATGAAACGTACACATAACATAGTAAAGAAGAGTAGTGGGAGTAATTAA
Protein Sequence: MTDISADIANEQNRRLKAELEAMKKELDEYRKPAVLDEADGGARKNDVVEKLSFRDKVVQMSFGEIHSNGMTIYNKEENKFEECGYQHGTPQKKIEAEMIICGNILVDFKSNKFLLKCILCEKKSRLYRDFVKHIKNKHKHETSPLPQQKEEVKLECEQQQQQDEDELSTKGDVSVNMNADMDKHPLAEIEIKPPESELAQEEDSIDFIPIGIPMGMPEDSEDDIKDEVEDEQEFMPEDEEFIPDEMEFDTDDNDNDDEEQNEDESSDNLDVPAYTEKFIPTFFRKKRFLNDFIDLYKTQQCLWNINDPLFENEEARQQAKKAIVKGMQKFNVYMKDKNLHKALDKLHRLCAGIKQNFDDPNPKKIPSVAKEYYKRCEFLNELIERKKISKTDQMMKKALNFQHYDLATVNFIDCYANYPIFYDGRHEYHNSLEERQRSLEELASNLSSQYDISLNDDELLKAIDQFQAWFYRMGKRFKSKKTKPSKADEIYFQKCKIFMPDEPAKKGINCGYCDKIYLCVNTLRVHHYKDHQVGELPFKCEQCGRTFDQNSSLTVHIQRAHVGKVYQCEYCERRFAVKSDLNVHKRIHTAEKPHVCEHCGKSFRLRSQLGYHVTAIHTKIRAFKCTMCPKDFLKKRDLTDHVKTHFNIRDKICETCGKGFSNCHSLIRHRQIHSEIRKFACKLCDAKFKQFVGLNGHMKRTHNIVKKSSGSN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00747725;
90% Identity: iTF_00750748;
80% Identity: -