Basic Information

Insect: Glossina fuscipes
Gene Symbol: RREB1
Assembly: None
Location: Scaffold85:47816-62709[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.0054 0.43 11.3 0.6 1 21 247 267 247 269 0.96

2 12 0.00031 0.025 15.2 0.2 1 23 279 301 279 301 0.98

3 12 2.2e-05 0.0017 18.8 7.5 1 23 307 329 307 329 0.98

4 12 0.05 4 8.2 0.8 2 19 558 575 558 575 0.98

5 12 0.0082 0.66 10.7 0.1 1 23 723 745 723 745 0.97

6 12 1.8e-05 0.0014 19.1 1.2 1 23 755 777 755 777 0.99

7 12 0.00077 0.062 13.9 2.0 1 23 783 806 783 806 0.97

8 12 0.0027 0.22 12.2 2.0 1 23 1159 1182 1159 1182 0.95

9 12 8e-05 0.0064 17.0 0.3 2 23 1505 1526 1504 1526 0.97

10 12 0.13 11 6.9 6.3 1 23 1532 1555 1532 1555 0.97

11 12 0.078 6.3 7.6 1.1 3 23 1734 1754 1733 1754 0.91

12 12 0.0012 0.099 13.3 4.8 1 23 1760 1782 1760 1782 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.0054	0.43	11.3	0.6	1	21	247	267	247	269	0.96
2	12	0.00031	0.025	15.2	0.2	1	23	279	301	279	301	0.98
3	12	2.2e-05	0.0017	18.8	7.5	1	23	307	329	307	329	0.98
4	12	0.05	4	8.2	0.8	2	19	558	575	558	575	0.98
5	12	0.0082	0.66	10.7	0.1	1	23	723	745	723	745	0.97
6	12	1.8e-05	0.0014	19.1	1.2	1	23	755	777	755	777	0.99
7	12	0.00077	0.062	13.9	2.0	1	23	783	806	783	806	0.97
8	12	0.0027	0.22	12.2	2.0	1	23	1159	1182	1159	1182	0.95
9	12	8e-05	0.0064	17.0	0.3	2	23	1505	1526	1504	1526	0.97
10	12	0.13	11	6.9	6.3	1	23	1532	1555	1532	1555	0.97
11	12	0.078	6.3	7.6	1.1	3	23	1734	1754	1733	1754	0.91
12	12	0.0012	0.099	13.3	4.8	1	23	1760	1782	1760	1782	0.99

Sequence Information

Coding Sequence: ATGCTGGCCAACCAACTTCCAACTACTGCGGCAGCAACAACCACGAGCACAAATGCCAGTTTAATCGCTAATAGCGGTAGCAACGTAACCGCTAACGATGATAATGCAAACATTAAAATGGAGCGACGTGACTCTTCAACGTCCGAGTCGTCTTTGGAGCATTTGGATTTGGGAAGAACACCaaaaaaaCGTAATACGGGCACATCGACACCCGTTATAACAAACGAAAGGAACATAGCGACCGATACGATGACAGTCGGTGTGTGTGCACAAATTCCAATGGGCCGCAACTTGCAGCAGCGTTTGCATGAGTCCGATGATGCTAATGATTACGATGACGACGAGTCGGCCGATGAGAAACACTTACGGTCATCTCAATTGCAGCCTCAACAGCAACAACAGCAACCACAACAGTCGCAGCGTCAATTTCATTACAAACGTCGTTCGAGTAGCCGTAATCTATTAGATAAACGTACAAGCGTGCAACTGGAGTTCAATAACGACAATCCAAGCTCGTTGCGGAAGAAATTTCGTTTCAACCGTAGCTCCTCGGACAATGTAACATGTTCTAATGAGTCTGGTTTTGTGGAAGGCAGTAGCAGTCAACTAATAAATAATTCAAACTCAGTTAATAACAGTAAGTCGAATACCTCATCGGCTTCTTCCACTCCCCCTCATAATGGACAAAATGGAATTTCTAGTCCTGAGTTAGGCGGTGGGGAGCGCGAGGATATGAAATATGTTTGTCCCATTTGTGAAGTAGTATCAGCCACACCACATGAGTTTACTAATCACATTCGCTGCCACAATTATGCTTCAGGTGATACCGAGAATTTCACTTGTCGTATTTGCTCAAAGGTACTCTCATCTGCCTCTTCATTGGATCGTCATGTACTCGTGCATACGGGAGAGAGGCCTTTTAATTGTAAATATTGCCATCTCACCTTTACAACGAACGGTAATATGCATCGTCATATGCGTACTCATAAGCAACATCAGCATACTcaccatcgacgcaactcaaatggtagcaagcacaacaacactaataataacaatacaagcagtagcagtaacaataacaataataataataataataataataataataataataatTCTATTAATTCCCATATATCAGCAGCTCCAAACATTGCTAGTACTACGATAAATACTACTAATGTGTCTTCATCTCCCTCATCCGCCCCGTATCATCTGTTAAGCAATGGACAACTAACTGAAGGCTTCAAATTATCATCGGCAACCCTTAACAACAACAGTGTGAATGGAAATTTTTTAAACGGTATCGCAGCTGCAGAAAGTTACGAGAGCGATGGCGGTTGTTCATCAGATATATCCACCGCACATAGTCAGAGCTCTAATCACAATAATAACAGCAACAATAATAACGATATAAAAATTGATAACAACAACTACAAACGGAAACTGGAGGACAGTCAACTTCATATGGAAAATGTAAATGACGAACTAAAGCGTCGAATTAAAAGCATTATTAATAACAATGATTTAACCGCCGTGCCTGTCGCAACATCTAGAATATCTCACGATTCCGCCGTATTGGTGTGTCCAGTTTGTAATGAAAATGATTTTTCCAATGTTTTAGCTTTGGATAATCATATGGATCTTAAACATTCTGAGATACCAGCTAAGTGCAAAAATTGCGAAGTCATATTTCGCACACATTATCAACTTAACATTCATCCTTGCTCGGCGGAACGAAAAATACAATCGGATATCATAAATCAAATTTCTGAACCGGAAAACATGATCAATTCAGATAAAGTAGCCAATGACAATTCCACTGTGATTGCTGCGGACAACGTGGATGACTTAACAGAGAAAGATGAGCAGTTTAAACAAAAGGAATTTTTCCGGCAACTCTATTTGAAAAATGCTATGGGGAACGTATCGCCTTCACAAGTTCAGCACGCAACAAATGAAAATTTAGAGGATGACATTAAAGATTTAGCTGACATACAATCGATTTTAAATATGACATCATCGTCAAGCACTTCGAATTTTCTTAAAAATTTCGAACAAACTGTTAATACTCCATCTTCTCAGTGCAGTTACGACAAGGACGAGGAAGAAGCTCAAGATGCTTTTACGGCAGAGTTCAGAAAGATGAAATTGCGCGGCGAATTTCCCTGTAAACTCTGCACAGCAGTGTTCCCCAATTTAAGAGCTCTGAAAGGCCATAATCGCATTCATCTCACTGAAGCCGGCCCAACGGGCCCATTTCGTTGCAATATGTGTCCATATTCCATTTGCGATAAAGCAGCTTTAGTTCGGCACATGCGTACACATAATGGAGATCGACCCTATGAGTGCGCCGTATGTAATTACGCATTCACGACAAAAGCAAACTGCGAGCGGCATCTACGCAATCGCCATGCAAAAACTACACGTGAAGAGGTCAAACGTGCCATTATTTATCATCCGTCGGAAGATTCTTCTTGCGATGATCCAACTAAAAAATTGTACATGTTTTCTTCGCCTGAGTTTGACGATGATAGTGAGGTGTTTGCCTACCATCAGCATCAACCAAAAGACCGTTCCACTCCTGTCTCTCATTTAAAAGAAATACTCACTGCCAGTGAAATTCCTTCATCGAAACCAGTAAAAATTCAAGTAAAAAGTTTAGAACAATTACTGGACAAGTCCTCGTCTACTTCATCTGGCTATCACGATAATTATGATCTTAACAGCCGAAATGTGGAAACGGCAGCACCTATTGACATGACTATGGATGTATTGGACTTAAGCAAAAAGCAAACGAATATAATAGAGAAGGAAAGTGAAAACTTCAATCATCCCGAGCTATCTATTGCCGCTACACCTTCATCCGACGAACCAAAAAATTTATCTATAACCAATGGCTCAATTAACGTAGAGGACCCAAAATTAGAATTGTCTGCGTTAGAGAAGCAGCAACAACAATTGTATTTAGCTCAACAACAAATACTTTCTGATCCTACTCAGTATCTTCAGCAACTATATCGCAATCTTATATTTCCACAGTTAAATCCGTTCTTCTTACCGAATTCATTCTTACCCAATACGAATTTGAGCGATCTTCAAAAATTTGCTCCCTTTTTAAGTCGCATGTTCGGAGCAACAGGCATTCCTCCTCCAGTAATACCCACTAACAATGAAATGGAAAAGACTTCGCTTGCTGGACCATCGAATCCTGCAACACCTGCAACAATTTTGCCACAAGTTAGCCCATTAATATCTGACAAATCAAGTCCAATGTCAGTTAATTCGCTTTCATCGCCGAAGTCTATGCTGTCACCAAATGCGGCTTCCCTTTCTATGCCTAGACATCCACCGCCTCCGCCATCCCACTTGCCACCAGCGATGCTCTCAAATGGCCCAGTTAAGATGGTACTTAAAAATGGCGTATTTATGCCAAAACAAAAACAAAGGCGTTATCGTACAGAGCGGCCATTTGCTTGTGAGCATTGTTCGGCTCGGTTCACTTTACGTTCAAATATGGAACGTCACGTGAAACAACAGCACCCCCAGTTTTATGCTCAACGTCAACGCAGCGGTCACCATGTAATGCGTGGTCGGGCTGCGAATAACACTACGAGCATTAATAATATTACAAATCTTCAAGCAGCCTTCGCCCAAGCCCACCATGATTCGAATTCCGGCATAAGTTCACCCATTTCAGATCAAGTCAAGTACGCCATCTTAGCGCAACAGCTCAAAGCTCGTAAGGATACCGATTTATTACACCAAGCCCTGGCTCATGGTTCCAGCAGTGTAGCCAATAGTCAAATACTCTCTGCTAGTCTTAATAGTAATCACTCACCACTAAATTTTTCGCACATGAATGGTAATGGTACACCCAACGGTTCTATGGAAGACGATGAACCCAAGTTAATAATTGACGAAGATGAAGATGAGGAGGACGATGTAGAGGAAATTCTTGATGAGAACGAAAATGAAAACGACGATGACCTAATGCCAACAGAGGATGAAAGCTGTGTTAAAACTGTTTTACAGCAATCGGTGGTATCAATAAATAATGCTAAGTCTAAGCAAGAGGGATCTAAGGACGCAGCTAAAAAAGTAGCCGAATCAATACTTGAACAGGCGATCAAAGCAGGTCAAACTAATGCATCATTGATCAAACCTGACCCACCCATGGTACCTTCGGCTAATACAATGAATTCCATGATCGCACAAGCGCCTGCTGTAGGTAAATTTCTAAAAGAAGTTGCCAGCTCTCCGTTCAAAGATGAATCTCAAGATCTAGTACCAGTTTCCAAATTAGTTGATAATGCGACTTCTAACTCGATGTCCTTTAATAGTTACTTTCGTCCTAGCGATCTGGCAAATCATATGGAGCAAAGCGACGAAGAAGGCTTAGTCGCTTCTGGTAGTGCCAGTGAAAGCAACAATTCTGGTGCCGAAGATGTTGTAACGACAGTGCAGCCTAAAAAGAAATCTGCTTACAGTTTGGCCCCGAATCGTGTATCATGTCCTTATTGTCAGCGAATGTTTCCTTGGTCGAGCTCCCTTAGACGACATATTCTCACACATACCGGTCAAAAACCGTTCAAGTGCTCACACTGTCCACTTCTTTTCACAACCAAAAGCAATTGTGATCGCCACTTGTTACGTAAGCACGGCAACATTGAGTCTGCGACTTCGGTATATGTACCTACCGAGGATGTTACTGAGCCCATACCATTACCAAAGTCAGTCGAAGAAATTGAAAAAATGCAACGTCAACGTGAAGAAGAAGACCGCAAACGAAAAGCTGATGAGGCTCGGGAGCAGGAGCGCGAACGCATTGAAAAAGAGCAGCGTGATAAACATAAACAAGAACAGGAACAGCAGCAAGCTTTTTTCAAACAACTGGCTGCCGCCCAATTTCAACAGTATACTACAAAAACTGAATCCAGCCAATTTTCAACATCGGAGCTGCCGTTTAAGTGTCACCTCTGTGAGAGTTCATTTGCCGAGCGTACACAATGTCTAGAACACATAAAATGCATGCATGCTCAAGACTTTGCTTTATTGTTAGCCAAAGGTGCGATTGATAGTGATGTCGAAGCAGCCCAACACCTAAACTCTGCCGAAGATGAAGAACGTGTACGCATCAATGAAGAGAGCAGCAAAGGCGGCAAATACCCAGATTATAGTAATCGGAAGGTTATTTGCGCCTTTTGCATGAGACGTTTCTGGTCTACCGAAGACCTACGTCGTCACATGCGTACGCATTCAGGTGAAAGACCGTTCCAATGTGAAATTTGCTTAAGAAAGTTTACATTGAAACATAGTATGCTGCGTCACATGAAAAAACATAATGGCCTGCATACCAGCGGTAATCAATCGGGCGGTGACTTATCAGCTAACGGCAATAGTGGTTCAGATTATTCTGATGACGAACAAACGCCAGTAGCCGCGGCACTAACAACTACTCAACAGTCAACACAACCAAATATCAGTGCCTTGTTCATGGGCTCAAAAATTCAGGAGTTACTTAATAAAGCTAATGAATGGCGAACGAGTGGCTTAAATACATTGGGAGACCATAAGGAAAATATTGCAGAAGAGAGTAATAATGGTCAACAATCTGATTTAATAGGCAATTTACTTGGCATTAGTGATCAGGGCATACTTAATAAGTTGATGTCATCGCCCGATGAGGCAGCCAAACTATTAGGAGTTGAAAAATGA
Protein Sequence: MLANQLPTTAAATTTSTNASLIANSGSNVTANDDNANIKMERRDSSTSESSLEHLDLGRTPKKRNTGTSTPVITNERNIATDTMTVGVCAQIPMGRNLQQRLHESDDANDYDDDESADEKHLRSSQLQPQQQQQQPQQSQRQFHYKRRSSSRNLLDKRTSVQLEFNNDNPSSLRKKFRFNRSSSDNVTCSNESGFVEGSSSQLINNSNSVNNSKSNTSSASSTPPHNGQNGISSPELGGGEREDMKYVCPICEVVSATPHEFTNHIRCHNYASGDTENFTCRICSKVLSSASSLDRHVLVHTGERPFNCKYCHLTFTTNGNMHRHMRTHKQHQHTHHRRNSNGSKHNNTNNNNTSSSSNNNNNNNNNNNNNNNNSINSHISAAPNIASTTINTTNVSSSPSSAPYHLLSNGQLTEGFKLSSATLNNNSVNGNFLNGIAAAESYESDGGCSSDISTAHSQSSNHNNNSNNNNDIKIDNNNYKRKLEDSQLHMENVNDELKRRIKSIINNNDLTAVPVATSRISHDSAVLVCPVCNENDFSNVLALDNHMDLKHSEIPAKCKNCEVIFRTHYQLNIHPCSAERKIQSDIINQISEPENMINSDKVANDNSTVIAADNVDDLTEKDEQFKQKEFFRQLYLKNAMGNVSPSQVQHATNENLEDDIKDLADIQSILNMTSSSSTSNFLKNFEQTVNTPSSQCSYDKDEEEAQDAFTAEFRKMKLRGEFPCKLCTAVFPNLRALKGHNRIHLTEAGPTGPFRCNMCPYSICDKAALVRHMRTHNGDRPYECAVCNYAFTTKANCERHLRNRHAKTTREEVKRAIIYHPSEDSSCDDPTKKLYMFSSPEFDDDSEVFAYHQHQPKDRSTPVSHLKEILTASEIPSSKPVKIQVKSLEQLLDKSSSTSSGYHDNYDLNSRNVETAAPIDMTMDVLDLSKKQTNIIEKESENFNHPELSIAATPSSDEPKNLSITNGSINVEDPKLELSALEKQQQQLYLAQQQILSDPTQYLQQLYRNLIFPQLNPFFLPNSFLPNTNLSDLQKFAPFLSRMFGATGIPPPVIPTNNEMEKTSLAGPSNPATPATILPQVSPLISDKSSPMSVNSLSSPKSMLSPNAASLSMPRHPPPPPSHLPPAMLSNGPVKMVLKNGVFMPKQKQRRYRTERPFACEHCSARFTLRSNMERHVKQQHPQFYAQRQRSGHHVMRGRAANNTTSINNITNLQAAFAQAHHDSNSGISSPISDQVKYAILAQQLKARKDTDLLHQALAHGSSSVANSQILSASLNSNHSPLNFSHMNGNGTPNGSMEDDEPKLIIDEDEDEEDDVEEILDENENENDDDLMPTEDESCVKTVLQQSVVSINNAKSKQEGSKDAAKKVAESILEQAIKAGQTNASLIKPDPPMVPSANTMNSMIAQAPAVGKFLKEVASSPFKDESQDLVPVSKLVDNATSNSMSFNSYFRPSDLANHMEQSDEEGLVASGSASESNNSGAEDVVTTVQPKKKSAYSLAPNRVSCPYCQRMFPWSSSLRRHILTHTGQKPFKCSHCPLLFTTKSNCDRHLLRKHGNIESATSVYVPTEDVTEPIPLPKSVEEIEKMQRQREEEDRKRKADEAREQERERIEKEQRDKHKQEQEQQQAFFKQLAAAQFQQYTTKTESSQFSTSELPFKCHLCESSFAERTQCLEHIKCMHAQDFALLLAKGAIDSDVEAAQHLNSAEDEERVRINEESSKGGKYPDYSNRKVICAFCMRRFWSTEDLRRHMRTHSGERPFQCEICLRKFTLKHSMLRHMKKHNGLHTSGNQSGGDLSANGNSGSDYSDDEQTPVAAALTTTQQSTQPNISALFMGSKIQELLNKANEWRTSGLNTLGDHKENIAEESNNGQQSDLIGNLLGISDQGILNKLMSSPDEAAKLLGVEK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00749186;
90% Identity: iTF_00750707;
80% Identity: -