Basic Information

Insect: Glossina fuscipes
Gene Symbol: -
Assembly: None
Location: Scaffold89:507282-512278[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.00021 0.017 15.7 0.5 1 23 197 219 197 219 0.95

2 15 0.12 9.8 7.0 1.8 3 23 227 247 225 247 0.95

3 15 0.00022 0.017 15.7 0.2 1 23 404 426 404 426 0.97

4 15 0.025 2 9.2 3.3 1 23 432 454 432 454 0.98

5 15 0.00012 0.0095 16.5 3.0 1 23 494 516 494 516 0.97

6 15 0.0076 0.61 10.8 0.3 1 23 536 558 536 558 0.94

7 15 0.042 3.4 8.5 0.8 1 23 564 587 564 587 0.96

8 15 0.093 7.5 7.4 0.3 5 19 598 612 595 613 0.91

9 15 0.00025 0.02 15.5 6.6 1 23 622 644 622 644 0.97

10 15 0.059 4.8 8.0 1.8 2 23 650 671 649 671 0.97

11 15 5e-05 0.0041 17.6 0.2 1 23 680 702 680 702 0.98

12 15 0.0047 0.38 11.4 0.2 3 23 710 730 708 730 0.97

13 15 2.6e-05 0.0021 18.6 0.5 1 23 736 758 736 759 0.96

14 15 0.31 25 5.7 0.2 1 23 769 791 769 791 0.96

15 15 0.0035 0.28 11.8 0.1 1 20 1339 1358 1339 1361 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.00021	0.017	15.7	0.5	1	23	197	219	197	219	0.95
2	15	0.12	9.8	7.0	1.8	3	23	227	247	225	247	0.95
3	15	0.00022	0.017	15.7	0.2	1	23	404	426	404	426	0.97
4	15	0.025	2	9.2	3.3	1	23	432	454	432	454	0.98
5	15	0.00012	0.0095	16.5	3.0	1	23	494	516	494	516	0.97
6	15	0.0076	0.61	10.8	0.3	1	23	536	558	536	558	0.94
7	15	0.042	3.4	8.5	0.8	1	23	564	587	564	587	0.96
8	15	0.093	7.5	7.4	0.3	5	19	598	612	595	613	0.91
9	15	0.00025	0.02	15.5	6.6	1	23	622	644	622	644	0.97
10	15	0.059	4.8	8.0	1.8	2	23	650	671	649	671	0.97
11	15	5e-05	0.0041	17.6	0.2	1	23	680	702	680	702	0.98
12	15	0.0047	0.38	11.4	0.2	3	23	710	730	708	730	0.97
13	15	2.6e-05	0.0021	18.6	0.5	1	23	736	758	736	759	0.96
14	15	0.31	25	5.7	0.2	1	23	769	791	769	791	0.96
15	15	0.0035	0.28	11.8	0.1	1	20	1339	1358	1339	1361	0.93

Sequence Information

Coding Sequence: ATGGATAATCATATAAGATGGCTGCAAAGTGCAAACGATTCAAGAATGGAGGACGATATGAAAACTGCCGGTCATTTATTAGTAGAGTCGCAGCCTCAGCCGGAATTGTTGGCGAACGGTGGTTCGAATTCAGACTATATGGCTACCGAAGATGAATGCGACTCAACGAGTATCGATCAAATCGCCGCTGAGAATTTAATTTTCATGGCCCGCGATGGACAAATGGTTACTGAAATTATTACTACACAAGGTATAGATTCTAATGGAGCCGTAGTAGTGGCAGCTAGTGATGGTACACAAATCGATTGCGAAGCAGTTATGGCACAAGCCGGCTTACTGCAACAACATGAAGATTTGTCTGATTCAGGTGGTGGTGTATATGTTGATGGCACTAATGTACAACAATACAGAGAGAATACACCGCAAATGGTCACCGAGGAGGTAATAACGGATGATTGGGTGCAACATCAGGGCGAGGAAAGAGTTGAAATACCTGCCGACCAAATTATTGGTTCCAACTCGCAAGTCTTATTAGACATTGAGGTGCCTTTACCCACGGTTCAAGATGAATACACCGCTTTGCGACCGTACCCGTGTGATTTTTGCAGTCGTCGTTTCCGCAAGAAGGCCAGCCTAATGAATCACATTGTGGCCCATCAAAATGATCGACCCCATCTTTGCAAGTTATGTGGATCTCGGTTTCTAAGACGACAAGACTTGATTAATCATTTAAAGGCCCACGCTGAGGAGCCTTCTGAACCACAGTTAGATGACAGTGATTATATGCAGTTTGTTGCCGATACTGTACCAAACCAATCAAATTCCAGTGAAAATTATTACGAACAAGAATGGAATATGTCGGCTGACACAGTTAGTACTCCTACAAAATGTAGTCAACGATTACAGTCTGCTAAACAGAATATAAACACCTGTTCTCCAACCTCTTCTAAAGCTGCAGATATACAATGCAGAGGTCGCATTAGTCGTCTTAAACCAAAAGGGGAAATATCAACATTTGAAATTATAGACGTACAAAGTGCTCGCACATCGGAGGCTTCCCAACTAGCTTACGAATCTATAATGGATTCAGTTCAAAGTCATAGCCTGTCACCTTTAACGGGTGCCATTAAGGCAACCTCGGATAACGTAACTGCACAAGATTCAGATAAGCAAGTTCAACGATTTCCAATTATCGACAGTGGTAAACCATTTGTCTGTCAGCAATGCGGGCTTTCATTCGCTCGCGAAAAAGCTTTGCTTTCGCATGGAAAGTCGCATTCTCGTGAGTCGCCTCATGAATGCTCGCAATGTAATGAAATGTTCTTAGATCACATTAGCCTGCAGGAGCATCAAAAAACTCATAATTTCGAGGAGAGCAATTCTGAATATGACCCTAACGAAGGCGGAGAGGACGATGAAGATGAAGACTTAGAGGAAACGCAAACAGAAACAGAGTCCGAGCAACAACTATACGGCGACTTTTATTGCAGCAAATGTGGCATGTCATTTCATAGACTGGATCTGTTAAAGAGACATGCCAAATTACACAACAAAACACAAACAGAAGAAAGCGGAATTGGTGGCGATGAGGACATTAGATATCGCCATTGTTGCAATACTTGCGGCGAATCATTTGCAGAGGCTTTGGACTTGTTAGCCCACGCTGAAATTCATGCCCGATATCCTCCATTTAAATGCATTCTTTGCGGTGAATCATTTTTCGAAGAAACATCTATTAAACGTCATTTACAAACCCAACACGTCGGTGAAATGACCGAAAATTCTTGCATACTTTGTGGGAAGGTGTGCCGTGACCGTAAAGCTCTCATCAAGCATGCCTGGGATCATTCCCGTGAAAAATGTCACTCATGCTCGAAATGTGGCAAGAATTTCCATAATAAGGCCCGTCTCAAACGTCATATGTCCTCTCATCGTGATAAATCAGTTCAGTGCGACGTTTGCCATGAAGATTTTCCAGACGGTCGCACGCTCTCGAACCATCGTCATTCGCATAGTGCTACTTCTGCCGGAAAACTTTTTCCTTGCCTGGAATGCGGTAAAACGTTCGGTTCACGCAGCTCTCAGCAGATTCATGTACGTATACATACTGGTGAGAGGCCTTATGGTTGTCGTTTTTGTTGGAAAGCTTTTGCGGATGGCGGTACATTGCGTAAACATGAACGCATACATACCGGAGAGAAACCTTACGTTTGCTCGGTCTGCCCTCGTGCCTTTAATCAACGTGTTGTACTGCGCGAACATATACGTTCTCACCATTCAGGCTTAGATTCTACACGGGGAACTTACCATTGCACAGTTTGCTCGGCAGATTTGCAGTCATCAGCTGATTTAATCCAGCACCTTATACAACATAGCGACACAAACACGGCTTTGCAAAGACAACCAGTGCCCGGGCCGCGCAAATATAAAAGGCGTCGTAAGTTAAAACCTCATGAAATAGCTCGTATGCGTCGGGAAGGCAACCAAATTGACCTTGGAAACACCAGCGATATCGATTTATCAGACTTTGACATGGACACGGTCGATGACTTACTGGGCATCACAGAAACTACAGCCTCCCCAAACAATGACAACAACGCTGCCACAACAATGATAATGAAAAAGAGTAACGCTAACAGATCTCAAGGTAGACGCACGAAGAGAAAATCGACCAAAGAAACTAACAATAATAAAAGCAAAGTGATTAAAAATGAAGTAGATTTAGATTTGGATGTAGAAATAGTTGATTGGGGATCGAAAAAATCAACGTTTAGTAGCGCTCACGGATCAGTGAAGACGCAAAACCATGTTGACGCGTTATTGAATAATCTTGAGAATACTTTAGATAACATAGACCATCTGGTAGTGGACAATAACACTCCTTCAACGCCATGTACGACAAAGCGTGCAAAATTAAAAACGAATACGGCTACGTCAAGAACTCAAGAGCTTCAATTAAATAAATCGACAATAAGAGAACCTGCGATGACATCTGGTAAAGGACGTAAAATGAGGTCTAGAAAATCAGCCCATAGACCGCAAATGATACGCACTGAGAAAAGGAAATCGCTCACTGTGGATGGAAATAAAAAGAAGACAATGTCCACCGTTACGCATCTTGCTCAATCCTCGACAAATCAGGATAATTTACGCAAAAAGTCAAGTATGGTTGATGATTATGAGATTATTACGCCACAATTGCAGCCACCAAATCAAATCAGTTCAAGTCCTTTACACATAAAACAAGAGCAATCTGATCTCCATGGTCAAAGAAATGATAGTCAACTGCATCATCACCAGCAGCATTCAAATGATTTGTATGACGCGCATTTGCTTTTAGAAGCTTCTGGACTGCGCAATGATTTAGACGAGATACTGCATTCGCCACTAAAATCTGAAAAGGGCTGCCATAGGCCGCGTTTTACTAGTGAATCGTCTTCGCAATTTATGGCCGAGCAATCAGAAGAAGAACAACATTTTATCAAAATAGAACCTACTTCGCCTGATTTGACAGAAATTGTGAATGGTGTTAGCTCGGGGACAGCTGGAGTAGAGTTAGATTCCAGTCCTGAATTGCAAAGGAAGGTTACCATGCAACAGCGTCGATCCACGCGAGGCTTAAAAACAGTAAAGCCTTTGAATAGCAGTCACCTACAATTAGAATTTACTTCGAATGTGGCGGAACATCCGACTACGCCGTCTAGAAGCACCAACAGTAGTAGCATTATTAGTAATCATTTGAATCGGGGTATTTGTAGTCCAACTACCAATACAAGCGATTTAACACCTAAAAGAATACGCACAGTTCTATCAAATTCCACGTCGACTTTAAACAGAACACCGACTTTTCTTGATTACGGTGTGGGAGATAGCTTTACTCAAACTGAATCTACAGCCACTTCAAATGCCAGTAATTCGTTTTCGTCGATATCGGCGGTAGTATCAGCGGCGGATGCCACTGCGGCAGCCGCTGCCCAGCAAAATCCTTCCTCTACACGAAAACCTCAACGTTATTTTGAATGTGAGATGTGTTCTGCCACCTTCTCCGATAGAGCTCAACTACTTGATCATGTACCCGTACATATTTAG
Protein Sequence: MDNHIRWLQSANDSRMEDDMKTAGHLLVESQPQPELLANGGSNSDYMATEDECDSTSIDQIAAENLIFMARDGQMVTEIITTQGIDSNGAVVVAASDGTQIDCEAVMAQAGLLQQHEDLSDSGGGVYVDGTNVQQYRENTPQMVTEEVITDDWVQHQGEERVEIPADQIIGSNSQVLLDIEVPLPTVQDEYTALRPYPCDFCSRRFRKKASLMNHIVAHQNDRPHLCKLCGSRFLRRQDLINHLKAHAEEPSEPQLDDSDYMQFVADTVPNQSNSSENYYEQEWNMSADTVSTPTKCSQRLQSAKQNINTCSPTSSKAADIQCRGRISRLKPKGEISTFEIIDVQSARTSEASQLAYESIMDSVQSHSLSPLTGAIKATSDNVTAQDSDKQVQRFPIIDSGKPFVCQQCGLSFAREKALLSHGKSHSRESPHECSQCNEMFLDHISLQEHQKTHNFEESNSEYDPNEGGEDDEDEDLEETQTETESEQQLYGDFYCSKCGMSFHRLDLLKRHAKLHNKTQTEESGIGGDEDIRYRHCCNTCGESFAEALDLLAHAEIHARYPPFKCILCGESFFEETSIKRHLQTQHVGEMTENSCILCGKVCRDRKALIKHAWDHSREKCHSCSKCGKNFHNKARLKRHMSSHRDKSVQCDVCHEDFPDGRTLSNHRHSHSATSAGKLFPCLECGKTFGSRSSQQIHVRIHTGERPYGCRFCWKAFADGGTLRKHERIHTGEKPYVCSVCPRAFNQRVVLREHIRSHHSGLDSTRGTYHCTVCSADLQSSADLIQHLIQHSDTNTALQRQPVPGPRKYKRRRKLKPHEIARMRREGNQIDLGNTSDIDLSDFDMDTVDDLLGITETTASPNNDNNAATTMIMKKSNANRSQGRRTKRKSTKETNNNKSKVIKNEVDLDLDVEIVDWGSKKSTFSSAHGSVKTQNHVDALLNNLENTLDNIDHLVVDNNTPSTPCTTKRAKLKTNTATSRTQELQLNKSTIREPAMTSGKGRKMRSRKSAHRPQMIRTEKRKSLTVDGNKKKTMSTVTHLAQSSTNQDNLRKKSSMVDDYEIITPQLQPPNQISSSPLHIKQEQSDLHGQRNDSQLHHHQQHSNDLYDAHLLLEASGLRNDLDEILHSPLKSEKGCHRPRFTSESSSQFMAEQSEEEQHFIKIEPTSPDLTEIVNGVSSGTAGVELDSSPELQRKVTMQQRRSTRGLKTVKPLNSSHLQLEFTSNVAEHPTTPSRSTNSSSIISNHLNRGICSPTTNTSDLTPKRIRTVLSNSTSTLNRTPTFLDYGVGDSFTQTESTATSNASNSFSSISAVVSAADATAAAAAQQNPSSTRKPQRYFECEMCSATFSDRAQLLDHVPVHI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00746908;
90% Identity: iTF_00750674;
80% Identity: -