Gfus010755.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Glossina fuscipes
Gene Symbol
Zbtb41
Assembly
None
Location
Scaffold72:427958-431363[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 8 9e-06 0.00072 20.0 3.4 1 23 213 236 213 236 0.96
2 8 0.017 1.3 9.7 0.6 2 23 244 264 243 264 0.96
3 8 8.6e-08 7e-06 26.4 1.2 1 23 270 292 270 292 0.96
4 8 0.00024 0.019 15.5 2.0 1 23 298 320 298 320 0.96
5 8 1.7e-05 0.0014 19.1 1.3 1 23 327 349 327 349 0.96
6 8 5.7e-08 4.6e-06 26.9 0.8 1 23 355 377 355 377 0.98
7 8 6e-07 4.8e-05 23.7 2.7 1 23 383 405 383 405 0.99
8 8 0.027 2.1 9.1 0.2 1 23 411 433 411 433 0.96

Sequence Information

Coding Sequence
ATGACTACCACCGTAGCAATGCaaaaaatgtgtcgtttatgtatgtctgaaacggctgaaaataaaaaagtgtactcaaaaatgtACTCAATTTATAAAGCGCCGTCAGGTGAAAAAGATGTTTCGATAGTAGAATTAATAAAACAAACCTTGCCACGGCTCCGTATATCTGATAAAGATTTACTGCCAAAATCGATTTGTGAAAATTGTGTCCTGAAACTAATGGATTTTTATAAATTCCAAGAGCTTTGTTTAAAAGTTGAACAAAAATATAAAAAATTCCTGGTtcaagaagatcaagaagatcCTTTAGCTAAATCTGATTTACCTATCGACATGAAAGAAGTCGATGAGATTGTCATAAATATGGATGACAATTTAAGAGATGAAGATTTTGATGGCATGAGCAGTATTAGTGATATTAAAGATGAGGATATAAAAACTTGCAGCGAATTTAGTGATGATTTCGTTTGGAGCGATTCGATTGATAGCTTGAGCAATGACAGCGATTGTATCGATGATAAAAAGGATAAGAATAAAAGTCAATACAAATTAAGAACTGCGAATAAGACGAATAGAAAGATCATTGACATGAAGCCAATAGATGCTAATCAAGGAACTAATAAAGCGCAACAGTTTGCATGTGAATTTTGCAACAAATTTTATAAAACAAAAGATACTCTACAGAAACATAGACGTGTCTTCCATATTGGTAAAGATAAACGGGTTACGTGCAATATTTGCAAGAAAGAATTGAAACCTTACAGTTTTAAGGAACATATGCTACTTCACAGCGATATAAAACCTTACTTATGTTCTGAATGCGGGAAATCATTTAGTTCCTCAAGCACTTTACGGCAACATTTACTACGTCATAAAGATGAAAAACAATACCAATGTCCCGATTGCCCTCGCAAATTCTCTTGCCGAAGTGATTTGTTTTCTCATAGCGAAGTACATCAAGCAAAACCAAAATCCCACGTATGCGATGTTTGCGGGCGGGGCTTTACTATGCCGTATATGTTAAAGAAACATAAAATGTATCATAACAATGACAGACCGTTCACTTGCGAATATTGTGGCAAAAGTTTCTATACGGCTGCAAAATTACGCCGCCATGCTCGCATTCATACGGGTGAAAAGCCCTATCGTTGTAAATACTGTGATAAACAATATCGTCAATCGAATGAACTGATCAAGCATTATCGCGTGCATTTAGGTGAAAATGTCTATCAATGCGAATTGTGTCCTTTAAGATTACCAACTGTAAAAACTTTGCGTGAACATTTTGCCAGTCATAAAAGTGACGATTCCGAAACAACGGAACGTAATCTCGCTGCTCTAAAAGCGTTGGAAATGAAAGGAATTTTCGCAAAATGA
Protein Sequence
MTTTVAMQKMCRLCMSETAENKKVYSKMYSIYKAPSGEKDVSIVELIKQTLPRLRISDKDLLPKSICENCVLKLMDFYKFQELCLKVEQKYKKFLVQEDQEDPLAKSDLPIDMKEVDEIVINMDDNLRDEDFDGMSSISDIKDEDIKTCSEFSDDFVWSDSIDSLSNDSDCIDDKKDKNKSQYKLRTANKTNRKIIDMKPIDANQGTNKAQQFACEFCNKFYKTKDTLQKHRRVFHIGKDKRVTCNICKKELKPYSFKEHMLLHSDIKPYLCSECGKSFSSSSTLRQHLLRHKDEKQYQCPDCPRKFSCRSDLFSHSEVHQAKPKSHVCDVCGRGFTMPYMLKKHKMYHNNDRPFTCEYCGKSFYTAAKLRRHARIHTGEKPYRCKYCDKQYRQSNELIKHYRVHLGENVYQCELCPLRLPTVKTLREHFASHKSDDSETTERNLAALKALEMKGIFAK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00747667;
90% Identity
iTF_00746902;
80% Identity
-