Basic Information

Gene Symbol
Csrnp2
Assembly
None
Location
Scaffold293:205572-210264[+]

Transcription Factor Domain

TF Family
CSRNP_N
Domain
CSRNP_N domain
PFAM
PF16019
TF Group
Unclassified Structure
Description
This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.1e-22 7.4e-19 68.7 0.1 1 61 37 97 37 101 0.89
2 2 1.2e-36 8.2e-33 114.3 7.9 108 216 97 205 90 207 0.94

Sequence Information

Coding Sequence
ATGGATTTGACTAAAGATGAAAACACTTCTCGCGAAGCATCTACTTTCGGCAATGAAAATTCTGCTTTGCCAATGAATTTGAATGATTCAAAAACTCCACCGGCAAAGAAATCAAAACGTTCGATTCATTTCGATAAAGTTCAAATCTTTTATTTTCCGCGTCAGCAGGGCTTTATTTCCGTGCCTGCAGCGGGTGGTTGTACACTGGGCATGGCACTTAATCACGTGGCGTTTAAAGTCATGTCTGTAGAAGAACATCTTGGCAAATTGAGCACACAAAAGAATCAATTGAATAAGAATAGTCCAGAGCCAATACCAGCCCACAAAAGGTTTATCTTGTTAAAAGCTGCCGGCATACATAAGATAGATGCTGTAGAAAAATTTGATTGCCATCAGATACGCAAATCACGTAAAGAGTGGGGTTGTGCTTGCCGTGGTTTCTGCGAACCGAAAACTTGTTCGTGTTCACAAGCGGATATAATGTGTCAGACCGGATATGGAGGGCTTTCCTGTGGTTGCTACCGTTCGGTTTGCGGCAACATGGTTGGTCGCGCAGAATACAGTTATGATCGACAACTTGCTTATACCCGACATAAGTTAATGCGTCTTaaacaaaaagatgaaaaactgaaCACAGCGGAGATAATTCTCCTTTCGGTGGGAAAATTGGAACTTGCATTTGTGTTACTAGTCAATCCAGGAAATGCTACGAAATCAGGAGGAGTACCGCCGACTTCGATGCAATCAGCCCGAAAACGATTTGCGGATGAGAATGCCTTAAGTAGAGGTTTGGTATCCGTTGTCAAAGCAATATATTTTCACACGAATTACTTCGAAGGTTTACGTTTGCATTTCTTACAAATTAAAAGCCATTATCTTACTAAGTCTTGGCTTGTTGATATCACAAGTGATTTAAAATATTATCTTTATACGAGTTTGCAGTTAAATATACCCACAAGCCCTAAATGGGTGCCGAACGTGGAATGA
Protein Sequence
MDLTKDENTSREASTFGNENSALPMNLNDSKTPPAKKSKRSIHFDKVQIFYFPRQQGFISVPAAGGCTLGMALNHVAFKVMSVEEHLGKLSTQKNQLNKNSPEPIPAHKRFILLKAAGIHKIDAVEKFDCHQIRKSRKEWGCACRGFCEPKTCSCSQADIMCQTGYGGLSCGCYRSVCGNMVGRAEYSYDRQLAYTRHKLMRLKQKDEKLNTAEIILLSVGKLELAFVLLVNPGNATKSGGVPPTSMQSARKRFADENALSRGLVSVVKAIYFHTNYFEGLRLHFLQIKSHYLTKSWLVDITSDLKYYLYTSLQLNIPTSPKWVPNVE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00750461;
90% Identity
iTF_00750461;
80% Identity
-