Basic Information

Insect: Glossina brevipalpis
Gene Symbol: stc
Assembly: GCA_000671755.1
Location: Scaffold81:559491-565030[+]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 2 1.4e+04 -4.4 1.6 15 19 588 592 587 592 0.81

2 14 0.084 6e+02 0.3 0.4 4 10 621 627 620 627 0.95

3 14 1.7e-06 0.012 15.3 15.3 3 19 634 650 633 650 0.92

4 14 5.5e-07 0.004 16.8 16.0 3 19 688 704 686 704 0.91

5 14 1.5 1.1e+04 -3.7 0.6 7 11 708 712 708 712 0.87

6 14 1.5e-07 0.0011 18.6 18.6 1 19 744 762 744 762 0.98

7 14 0.00019 1.4 8.7 17.7 4 18 810 824 803 825 0.86

8 14 0.036 2.6e+02 1.5 11.5 1 11 865 875 865 886 0.94

9 14 5.7e-10 4.1e-06 26.4 15.5 1 18 892 909 892 910 0.97

10 14 2 1.4e+04 -4.1 0.9 6 10 939 943 939 944 0.81

11 14 2 1.4e+04 -8.0 11.0 10 18 957 966 946 967 0.78

12 14 6.1e-07 0.0044 16.7 13.0 1 16 1003 1018 1003 1028 0.89

13 14 1e-06 0.0072 16.0 13.7 1 18 1035 1053 1035 1054 0.90

14 14 0.46 3.3e+03 -2.1 0.4 8 12 1070 1074 1063 1074 0.75

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	2	1.4e+04	-4.4	1.6	15	19	588	592	587	592	0.81
2	14	0.084	6e+02	0.3	0.4	4	10	621	627	620	627	0.95
3	14	1.7e-06	0.012	15.3	15.3	3	19	634	650	633	650	0.92
4	14	5.5e-07	0.004	16.8	16.0	3	19	688	704	686	704	0.91
5	14	1.5	1.1e+04	-3.7	0.6	7	11	708	712	708	712	0.87
6	14	1.5e-07	0.0011	18.6	18.6	1	19	744	762	744	762	0.98
7	14	0.00019	1.4	8.7	17.7	4	18	810	824	803	825	0.86
8	14	0.036	2.6e+02	1.5	11.5	1	11	865	875	865	886	0.94
9	14	5.7e-10	4.1e-06	26.4	15.5	1	18	892	909	892	910	0.97
10	14	2	1.4e+04	-4.1	0.9	6	10	939	943	939	944	0.81
11	14	2	1.4e+04	-8.0	11.0	10	18	957	966	946	967	0.78
12	14	6.1e-07	0.0044	16.7	13.0	1	16	1003	1018	1003	1028	0.89
13	14	1e-06	0.0072	16.0	13.7	1	18	1035	1053	1035	1054	0.90
14	14	0.46	3.3e+03	-2.1	0.4	8	12	1070	1074	1063	1074	0.75

Sequence Information

Coding Sequence: ATGTCGGCCGCTGATTCAAAAACTCAGCAACCAATGCATCAGCCATCGTTGTCACAGTTGTGGCCAGATTTTGGGGCATCTTCCGTTAATGACGTGACAACAGGCCAAGCTTTCAACAGGAATGATGGCGTCGTTGACGGTCCATTGGGGGATAATGGCCCTGGTACTTTGGGGCTTTCCTCTTTCGGCAAGAGCAATAACAAAAGCAACAATTACGTAAATTTTAATCAGTTCATCATGCAACATAATTTATTGGGAGCTAATGGGGGCGGTAAGGATGAAATAGTAAACAGCGAACCAGCTTACTCAAACTTAAGCAGTGCTTTTAACGCCGGTGATGATTTACTCGGTATCAACAAACTTTCGTACAACAACAACACCAATGCTGTTGAAGCAAATTCGTTTTATCAACAAAATTATTATTCTCCTGGAAATCCACTAGGTTTCACTTATAGCCAAAATGCTGGAAATAGCATTTTTAGTGATGGTTTGACTTCTAATAATATTTTTATGGGGGGAACAGCACAAAATTTATATAATAGAGGCAACAACAACAACAACGGCAGCGTCAACAATGGTAACAGTTACGAACAATTATATACGCCTTTCAATAGTAATACCACATACTATGCAAACCCATTTGCTACTGGATTCGATTTTACAGCAACAAAATTACAAGTGAACGCACCCGAGTTTGTGCCACGTTTCGACAAACTTTCGTTGACCGAAAATCAAGCGATATGGAATAACAAAGAAACTGAATTATATAAAGAGGAGAAAACTAATTTGATGGCTGATTTCAACAACTCTCAATGTAGTCCAAAACAGCCGCAACAAATTCAAGAATATTTCTCAGGGCAAGAAGAACAGACAAAGAGAGAAGAAGAGGCATTAACTGTAAAAGGGCAGGAGAATTTCACGAAAAATGAGCCTCATTTTCAAACATCTaaaaaagataaaatagaaaaaCAAGGAGATGACGGAGGGGGCAGTAATAATTATAATCACAACATTCAAAAGAAGTCATATAACCGTTTAGaaaaaaaTATGGAAAGATTTTCCCGTCCTTTCTTGGATAACAAACCTAATGATTCATCGTCCAATTCTAATTCATCATCGCCATTGACAGGAACGGTGCAAAAGACTACCAATACTTTCAATAAATTAATGAACGATGGTACTGAAGATAAAGTCAACCAACCAGAAATAGCTCAAGAGAAGTCGAGACGTTTCCAGAACAGTCGTAATCGAGGTAATTGTGGAAGCAGTATGCAGGACTATCAGGACCGTGAAGATCGTTTTGAACGTTATATAGAGAGAGGAGAACGTTCCGAGAGAGGCTATAACAGTCATGGCCATCACCGTATTAACCGTGATCGTGACTATCATCAACGTTACGACAACTATCGTAGTAACAAAAGGCGCGACGATTGGAACCGAAATCGTGATCGTGTCAATGGTTTTCGAGTGGAAGAAAAGTACTCGACTGATAACATCAAAGACAGTCCATTGCATTCGCCTGAGAAGAAATTACAGCACATTAATAATTCACCGAAGAAATTTTATCCAGAAAATGAGAAGTTATCGCAACGTGAGAAATTAATACGAGACATTGAAACGAGACGCTTAGAATGTTTGGTATGCGTTGAACAGATCAAGGGCTATCAAGGCGTTTGGTCTTGTCATAATTGCTATCATATTTTGCACTTGCAGTGCATTGTTAAGTGGGCATCATCTTCGAAGTCGGATGATGGCTGGCGTTGTCCGGCCTGTCAGAATGTTGTGAAAGAAGTGCCGCGTGATTATTATTGTTTTTGTGGCAAAATTAAGAACCCATTGCAAAATAGACAAGATTTGGCTCATTCGTGTGGCGAAGTCTGCAGTCGTGTTGAAAATTGCACACATGCCTGTACGTTGTTATGTCATCCTGGACCGTGTCCCCCATGTCAAGCCAATGTCAAGCGGGAGTGTGGTTGTGGTAAAACAACTAAAATTATGCAGTGTTGTATAAAAGATACCGTAGAATGTGATGCTGTCTGCGACAAAGTGTTGAATTGCGAATCGCACCGATGTCAGGAAAAATGTCATCAAGGTAAGTGTCCACCTTGCAAAGAGAAGGTGGAACAAAAATGCCACTGTTCCAAGCAAGAACGTCAGGTGGCTTGTACCCGTGAATCCCACGACAAACACGTCTATTCATGTGGAAAACCTTGTGGCAAAGATTTGACTTGCGGTAATCACAAATGTAAAGATTGCTGCCATGCTGGTGAGTGTCGCCCGTGTAAACTTTCACCCGAAATAGTGACTTCTTGTCCTTGTGGCAAAATGCCTATAGTTCCTCAACAGCGGACTTCCTGTTTGGATCCCATTCCACTATGCGAAGGGATTTGCGGTAAAACTTTGCGCTGCGGCAAGCCAGCTCATCCCCATCACTGCACGAGCAAATGCCATTTGGGCAATTGCCCACCTTGCAATAAGCAGACCGCGGTTAAGTGCCGTTGCGGCCATATGGATCAAATGATAAAATGCCGTCACTTAAGCACAAGGGCTGACGATGCGCGCTGTAAGAAGCGTTGCGTCAAAAAGCGATCATGCGGCAAACATAAATGCAACCAGGAATGCTGCATAGACATCGATCACATTTGTCCACTGCCTTGTAATTACACATTGTCGTGCGGCAAGCATAAGTGTGATCAACCCTGTCATCGTGGTAATTGTCCGCCATGTTACCGATCTTCATTTGAGGAACTATTTTGTGAGTGCGGAGCAGAGGTTATCTACCCACCGGTACCATGCGGCACTAAGCGACCGCTTTGCAAAAGGCCCTGTTCTCGTAAACATCCTTGCGACCATCCTCCACAGCACAATTGCCATTCTGCTGCTAGTTGTCCTCCATGCATGATGTTTACCACTAAATGGTGTTTCGGGCAGCACGAGCAGCGCAAAACCATTCCATGCTCACAACAGAGTTTTAGCTGCGGCATGGCTTGTAATAAACCATTGCCATGTGGTCGACATAAATGTATAAAAACTTGTCACGAGGGTGTTTGTCAGGTGGCAGGAGAAGTTTGTAAGCAAAACTGCCCAATATTGAGGACATCATGCGGTCATAAGTGCATGGCGCCATGTCATGAAGGCGACTGTCCTGAAACGCAGTGCAAGGAAATGGTCGAAGTACAATGTGAGTGTGGCAATCGCAAGCAGATGCGTCCTTGTCATGAGTTAGCACGCGAATATAGTCGTATTGCTACTGCGCAGTTGGCTTCGTCCATGGCTGAAATGCAACGCGGCAATTACATGGAGTTGAGTGAGATTTTAGCTCCCGTCAAGTTCTCTAATAAAACCAACAAAACTCTCGACTGTAATGATGAATGCCGCTTGATGGAACGTAATCGCCGTTTAGCTGTCGGTTTGCAAACACGTAATCCCGATGTACCACAGAAATTAATGACAAAATATTCTGATTTCATACGTAATTTTGCTAAGCGTGACCCGGCTTTGGTAAAATCTGTTCACGAAGCCCTAACCACGTTAGTTAAATTAGCCAAAGAGAGTAAACAGAAATCACGTTCGCATTCATTTCCCACTATGAATCGTGAAAAGAGGCAACTCGTTCATGAAATGTGTGAAATGTTTGGTGTTGAATCCGTGGCTTATGATGCTGAACCAAATCGCAATGTGGTAGCTACGGCCTATAGAGATAGGTCATGGCTTCCTGCCACCAGCATCATGGATGTTATACAACGTGAATCTGGTCAACGCCGTGTGCCGGTGCCCAGCAATAATGCTTGGGGCTCGAAAAGATAA
Protein Sequence: MSAADSKTQQPMHQPSLSQLWPDFGASSVNDVTTGQAFNRNDGVVDGPLGDNGPGTLGLSSFGKSNNKSNNYVNFNQFIMQHNLLGANGGGKDEIVNSEPAYSNLSSAFNAGDDLLGINKLSYNNNTNAVEANSFYQQNYYSPGNPLGFTYSQNAGNSIFSDGLTSNNIFMGGTAQNLYNRGNNNNNGSVNNGNSYEQLYTPFNSNTTYYANPFATGFDFTATKLQVNAPEFVPRFDKLSLTENQAIWNNKETELYKEEKTNLMADFNNSQCSPKQPQQIQEYFSGQEEQTKREEEALTVKGQENFTKNEPHFQTSKKDKIEKQGDDGGGSNNYNHNIQKKSYNRLEKNMERFSRPFLDNKPNDSSSNSNSSSPLTGTVQKTTNTFNKLMNDGTEDKVNQPEIAQEKSRRFQNSRNRGNCGSSMQDYQDREDRFERYIERGERSERGYNSHGHHRINRDRDYHQRYDNYRSNKRRDDWNRNRDRVNGFRVEEKYSTDNIKDSPLHSPEKKLQHINNSPKKFYPENEKLSQREKLIRDIETRRLECLVCVEQIKGYQGVWSCHNCYHILHLQCIVKWASSSKSDDGWRCPACQNVVKEVPRDYYCFCGKIKNPLQNRQDLAHSCGEVCSRVENCTHACTLLCHPGPCPPCQANVKRECGCGKTTKIMQCCIKDTVECDAVCDKVLNCESHRCQEKCHQGKCPPCKEKVEQKCHCSKQERQVACTRESHDKHVYSCGKPCGKDLTCGNHKCKDCCHAGECRPCKLSPEIVTSCPCGKMPIVPQQRTSCLDPIPLCEGICGKTLRCGKPAHPHHCTSKCHLGNCPPCNKQTAVKCRCGHMDQMIKCRHLSTRADDARCKKRCVKKRSCGKHKCNQECCIDIDHICPLPCNYTLSCGKHKCDQPCHRGNCPPCYRSSFEELFCECGAEVIYPPVPCGTKRPLCKRPCSRKHPCDHPPQHNCHSAASCPPCMMFTTKWCFGQHEQRKTIPCSQQSFSCGMACNKPLPCGRHKCIKTCHEGVCQVAGEVCKQNCPILRTSCGHKCMAPCHEGDCPETQCKEMVEVQCECGNRKQMRPCHELAREYSRIATAQLASSMAEMQRGNYMELSEILAPVKFSNKTNKTLDCNDECRLMERNRRLAVGLQTRNPDVPQKLMTKYSDFIRNFAKRDPALVKSVHEALTTLVKLAKESKQKSRSHSFPTMNREKRQLVHEMCEMFGVESVAYDAEPNRNVVATAYRDRSWLPATSIMDVIQRESGQRRVPVPSNNAWGSKR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00748665;
90% Identity: -
80% Identity: -