Gbre012058.1
Basic Information
- Insect
- Glossina brevipalpis
- Gene Symbol
- nfxl1
- Assembly
- GCA_000671755.1
- Location
- Scaffold30:1092444-1096703[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 21 2 1.4e+04 -8.1 6.4 15 19 156 160 155 160 0.82 2 21 0.11 7.8e+02 -0.1 0.2 4 10 191 197 190 198 0.95 3 21 1.3e-07 0.00095 18.8 14.0 1 18 205 221 205 222 0.94 4 21 1.7 1.2e+04 -3.9 2.4 6 10 248 252 247 252 0.89 5 21 3e-06 0.022 14.5 13.8 1 19 258 277 258 277 0.95 6 21 1.4 9.9e+03 -3.6 1.5 6 10 302 306 301 306 0.87 7 21 1.9e-09 1.4e-05 24.7 12.4 1 19 312 330 312 330 0.99 8 21 1.7 1.2e+04 -3.9 0.8 6 10 355 359 354 361 0.54 9 21 4.1e-08 0.00029 20.5 12.4 1 18 365 382 365 383 0.96 10 21 0.71 5.1e+03 -2.7 0.4 1 5 392 396 392 401 0.73 11 21 2 1.4e+04 -5.0 2.3 5 10 406 411 406 411 0.91 12 21 5.1e-05 0.37 10.6 15.7 1 18 417 434 417 435 0.97 13 21 5.6e-11 4.1e-07 29.6 14.1 1 19 444 462 444 462 0.98 14 21 1.2 8.3e+03 -3.4 1.0 5 10 489 494 489 494 0.90 15 21 0.01 74 3.2 7.1 10 19 508 517 506 517 0.92 16 21 0.044 3.2e+02 1.2 5.7 1 12 529 539 528 539 0.90 17 21 0.33 2.3e+03 -1.6 0.9 6 10 598 602 597 602 0.90 18 21 4.9e-06 0.035 13.8 4.6 1 11 608 618 608 619 0.99 19 21 0.0043 31 4.4 16.1 3 19 648 664 647 664 0.92 20 21 2 1.4e+04 -6.8 3.1 10 13 671 674 670 674 0.68 21 21 6.4e-07 0.0046 16.6 12.5 1 16 715 729 715 735 0.86
Sequence Information
- Coding Sequence
- ATGTCACAACTCGCCGATAAGTCAAATGATAATGAGAAAACTAGTCGAAAGTTTTATGAGGCACATGCTAAGAATGTAGAAGCTGCTAAGAAATTAGTAGAAAAATATGTTTCCTCATCTGAAGAGGAGGATGAATTGGATGAAGCGACCATCTTAAAAGCACTATACAAAAATTACAGTGACTGTAAAGAAGATGAGCATTTATTGGCTAAGACAGCGAGTTTTTTAGAAAATGTATTGCACTCTGGTTCAGCCACTTGTCTTATCTGTATAGCTAGTGTGAAGAGGACAGATGCGATATGGTCCTGTAAACATTGCTATTGTTTCTTTCACTTGAATTGTATATGTCGTTGGGCTAATGATAGTATGGCTCAACATAAGGCACAGAATCATAACGTACAGGGCTATTACAATCATTTGGGTGAATATGTATCTCCCACaaaaaaaaaaGCGTTACATTGGTGTTGTCCACAATGTAGGCGAGAATTTCAACCGAACGAGAAACCTACAGCATATGAGTGTTTTTGCGGTAGAGAAACTAACCCTATATCACAACCATGGCTGCTACCCCATTCGTGTGGCGAAATATGTGGTAAACTTCTACAGCCTAATTGCAGTCATAAATGTAATATACTCTGCCACCCGGGACCGTGCCCACCATGTGCTCAATACGCAATCACATCCTGTAAATGCGGTAAATCTCTACCAAAATCTATGCGCTGCTTAGAAAAAGATTGGGAATGTGAACAAAAGTGCAATTCATTTTTACCCTGTGGCCGACATAAGTGCCGACAACTTTGCCATAAACGCGAACAGTGTCCACCGTGTAGTCAAATAAGTACGCAAACTTGTGAATGTGGCAGAGAATCGATGAAACGTCAATGTTGTGAACAGAAATGGCAATGTCAACAAATGTGCAGCAAATTGTATTCCTGTGGTATACATGCCTGTAAGAAAATTTGTCATTCTGGTGATTGTGGTGAATGTCCACTAAGTTTACCACGTTCTTGTCCTTGTGGCAAAACCAAAAAAGTCGGACCTTGCACGGAAATAATCGACACTTGCGGAGATACTTGCCAAAAAATTCTCGCTTGCGGTCAACACACTTGTACCCAAAGATGTCACAAAGGAAGTTGTAATTTATGTCTAGTTATCACTAAGAAAAAATGTCGATGCGGTTTGCATGAAAAAGAGCTTCCATGTTCGAAGGAATTTACTTGTGAAACCAAATGTAAACAGAGCAGAGATTGTGGCACACATTCATGCAATCGCAAGTGCTGCGATCGCAACTGTCCACCCTGTAATAAATTGTGCGGTCAACCTTTATCTTGCGGCAAGCATAAATGTCAATCGGTTTGCCATAAAGGTCCCTGTTATCCATGCCGGCAACAATCTCAAGTTAATTGTCGTTGTGGAAAGACTCGCAAAAGTGTTCCGTGTGGGAGGGAACGTACCGTGCGTGTAACATGCTTAGAGCCTTGCAGAATACCTTCTAAATGTCATCATGTCAATCGACATCGTTGTCATAAAAATGAATGCCCGCCTTGTTCTCAAATTTGTGGTTTGCCAAATAATTTTACTGGTTGTAGTCACATCTGCAAAGCCAAATGCCATAGCTATGTGAAAGTGTCAAACAAAGGAAACCCGGATATAGTCAATATTTGGGAAACCGCTAAAAGGATTGAATATAAATCATTACCTCATCCTCGTTGTGAAGAAAAAGTTCTAGTTGCTTGTATAGGAGGTCATGAAATACAAGAAAGAGCGTGTTGGAATTCAAATCCGGACTCTTGCCAGCGTTTATGTAATCGTAAATTGCCTTGCGGCAACCACAAATGTACACTGGTCTGCCATTTTGTGAGCCATCCCGATGATATGAAGGCCCAACAAGGTTGTATGTCTTGTGAAAACGGTTGTAATATACCACGACCTACCGGTTGCACCCACAATTGTCCCCGACCATGTCATTTACCACCTTGCAATCCCTGCAGTGTAGCTATTAAAACGAAATGTCATTGTGGTCTGATGCAAATTATTTATAAATGCTGCGATTACTATGACAATGGAGGCAATGAAAATGATATTGCTGAGCGGCAAGAGCAGTTAAAAAGTTGCGGTAATCGATGTTTAAAAAATTATCCTTGTGGTCATCGTTGTGCTGCCAAATGCCATGCAGGCCCCTGTCCGGAACCTAGTAACTGTCGCAAAAGACTGCGCATTTACTGTGAGTGTAAACGTTTAAAACAAGAGATTTCCTGCGATAAGCATCGTTCAGGGCTAACTAAATTGATATGTGACCAAAACTGTTTTGAAATCATTAAGAAATCAGAATTATCCCGTCGAATGGCAGAGGAACTGTTGCGTAAGCAAGAAGATGAACGTAATCGATTAGAAGTGGAGCAATTTGAGAAGAGATTTAGTAAACGCAAACACAAAGAACGAAAATCTCTTGAATTGAAAGAAAAACGAGAAGTCAATTGGAAATTGTTGCTAATGTACGTGGGTATCTTTAGCGCAATCCTTTTGGCCGTTGGCTTGGCATTTTATGAAGAACATTAA
- Protein Sequence
- MSQLADKSNDNEKTSRKFYEAHAKNVEAAKKLVEKYVSSSEEEDELDEATILKALYKNYSDCKEDEHLLAKTASFLENVLHSGSATCLICIASVKRTDAIWSCKHCYCFFHLNCICRWANDSMAQHKAQNHNVQGYYNHLGEYVSPTKKKALHWCCPQCRREFQPNEKPTAYECFCGRETNPISQPWLLPHSCGEICGKLLQPNCSHKCNILCHPGPCPPCAQYAITSCKCGKSLPKSMRCLEKDWECEQKCNSFLPCGRHKCRQLCHKREQCPPCSQISTQTCECGRESMKRQCCEQKWQCQQMCSKLYSCGIHACKKICHSGDCGECPLSLPRSCPCGKTKKVGPCTEIIDTCGDTCQKILACGQHTCTQRCHKGSCNLCLVITKKKCRCGLHEKELPCSKEFTCETKCKQSRDCGTHSCNRKCCDRNCPPCNKLCGQPLSCGKHKCQSVCHKGPCYPCRQQSQVNCRCGKTRKSVPCGRERTVRVTCLEPCRIPSKCHHVNRHRCHKNECPPCSQICGLPNNFTGCSHICKAKCHSYVKVSNKGNPDIVNIWETAKRIEYKSLPHPRCEEKVLVACIGGHEIQERACWNSNPDSCQRLCNRKLPCGNHKCTLVCHFVSHPDDMKAQQGCMSCENGCNIPRPTGCTHNCPRPCHLPPCNPCSVAIKTKCHCGLMQIIYKCCDYYDNGGNENDIAERQEQLKSCGNRCLKNYPCGHRCAAKCHAGPCPEPSNCRKRLRIYCECKRLKQEISCDKHRSGLTKLICDQNCFEIIKKSELSRRMAEELLRKQEDERNRLEVEQFEKRFSKRKHKERKSLELKEKREVNWKLLLMYVGIFSAILLAVGLAFYEEH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00750138;
- 90% Identity
- -
- 80% Identity
- -