Gbre008967.1
Basic Information
- Insect
- Glossina brevipalpis
- Gene Symbol
- pnr
- Assembly
- GCA_000671755.1
- Location
- Scaffold217:328552-357039[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.011 51 3.3 0.4 1 24 478 498 476 499 0.78 2 2 1.1e-17 5.2e-14 51.2 6.9 1 34 532 564 532 566 0.97
Sequence Information
- Coding Sequence
- ATGCATCTTAAGATGGAGGCACAAGCGCGGCAACAACAACATTTGCAACAGCAACGTAATCAATCACAACAGCAACTTTTACAACATCCTTTAAGTAAAAATCAACAAAATTTATTGGATAAAATCAAAGACGAAGTAAATGGTCAAGAACATCAGTCGCAATTGAATCATTCAGCGAATGTGCTTTTGGAGAGGCAATCACCTAATGAACATCAGAACCCGCacaaacaacaacaacaacaacaaacgcaacaattaactagtcattctgcacgatcgcagcaatcgcaacaacagcagcagcagcagcagcagcaacaacagcagcagACCCAAGCTTCAACTTCTTTAACTTCATCACAACAACAGCCGGCTAGTGTGGTAATACAGGTCCAACCAACTAATCTACAAACAACGTCACAAACTAACGAAGACTTTATACCTTCTCTACCGCGTACGCAACATCGACGAATTTTAACCACTTCGGGTGAACTAGTTAGTGATCAAAGAGAAACTGAACAAAGTGAACAAACAACAAACGAATATCAAGGTCATTCCCCAGACGAATATGTACAAATGGCCCGGCATCATGAAGAACAACAATCTGCTCCAGATTCCACAGATTATACGTACATTACCGATGAAAATGGTCACATGCTATGTGCTACCACCGAGAATGTTGGTACCATAAAATTGGAATCCATAGATAAAGAGCAGGTAACGGTGGACGCgcaacaacaacaacaacaacagcaacagcagcaacaacatcaacagcagcagcaacaacatcaacatcaacatcatcatcatcatcatcagcatcagcatcagcatcaatgTCCCACACCTGGTACTTACGGAGAGCAATTAATTGTTTCGGCAACAGCTTTACATCATCAAAATCCTCATCATTTGGCCAATACCGCTATAAATCATGGTAATCATTCGTCGCCATTATTGCGTTTCGAAGACGATGCCCGATTTGCTTCCGCCATGAATGATCATGGCAACGGACCACCTTTATATTACGATCCGCCAGTGGTGGATGCTCCTACACATCCTAATGAAGCTAAAACATTTACCGATCTCGGTAATTCACATTATCTAAATTATCCCACGTCTTCATATCAATTAGGTCCTGGCAATGCCGTATACAGTGTTGCAACTCCTACGCAATTAATTAGTAAATCTGATCCAAATTTAAGTACTTTAGTACGACAACCCACGCAATATCAATCGATGCCAATATTTGATTCAGTCAATACCTCGGTCCAAGAACAAGGTCTCTGGCCTTCATCAGCCGTGGAATATCAAAGTTTTGTAGTCGAAGATTATCCTCCCGGTAATATTACAACAACGAGCTGGCCTGGCGCTACCTCTATGGTACCATATGAGACAGCATTAGCAACTACTATACCAGATGTGAAATGCGAAAATTGTAATTCTCCTTTAGTACGTAAAGGGAACGAGGTCTTTTGCTCACTATGTTATGCGCCCACACAATTAATTCGTCAAAATGTACGTATAACTGCCAGGCAATCAAAACCAAAGGCAACGGTAACAGCGAATAATCGACGTACTGGCGTTACTTGTGCTAATTGTCAAACTAATTCTACAACTTTATGGCGTCGCAATAATGAAGGTAATCCAGTATGTAATGCTTGCGGTCTTTATTTTAAACTACATAACATGAATCGTCCGTTATCTATGAGAAAAGAGGGCATACAAAAACGTAAACGTAAACCCAAAAATAATGGAGGTGGTGCCCCACTAAGGCCGCAATTGCCAAGCATACAACTCAACGGTCATTTAAGCGGAAGTCCTTTATATCCATCGCAAGTATCAACTATTGGTTTATCAATAAATCCGCAAACAAATGCACCCGATTTACCAGATATGTCTACAAGCGGTAATCGTACGATCTCAATAGCGCCGGATATAACATTAAATATGTCTCGTCCGCATATAGTACCACCAGataatcattcaccgtataataattcaccgtCGCAAAGTAAATCACCTCACTTAAGTCAATCGACATCTTTAAATCGTCAAATTGCGCCAACGTAA
- Protein Sequence
- MHLKMEAQARQQQHLQQQRNQSQQQLLQHPLSKNQQNLLDKIKDEVNGQEHQSQLNHSANVLLERQSPNEHQNPHKQQQQQQTQQLTSHSARSQQSQQQQQQQQQQQQQQTQASTSLTSSQQQPASVVIQVQPTNLQTTSQTNEDFIPSLPRTQHRRILTTSGELVSDQRETEQSEQTTNEYQGHSPDEYVQMARHHEEQQSAPDSTDYTYITDENGHMLCATTENVGTIKLESIDKEQVTVDAQQQQQQQQQQQQHQQQQQQHQHQHHHHHHQHQHQHQCPTPGTYGEQLIVSATALHHQNPHHLANTAINHGNHSSPLLRFEDDARFASAMNDHGNGPPLYYDPPVVDAPTHPNEAKTFTDLGNSHYLNYPTSSYQLGPGNAVYSVATPTQLISKSDPNLSTLVRQPTQYQSMPIFDSVNTSVQEQGLWPSSAVEYQSFVVEDYPPGNITTTSWPGATSMVPYETALATTIPDVKCENCNSPLVRKGNEVFCSLCYAPTQLIRQNVRITARQSKPKATVTANNRRTGVTCANCQTNSTTLWRRNNEGNPVCNACGLYFKLHNMNRPLSMRKEGIQKRKRKPKNNGGGAPLRPQLPSIQLNGHLSGSPLYPSQVSTIGLSINPQTNAPDLPDMSTSGNRTISIAPDITLNMSRPHIVPPDNHSPYNNSPSQSKSPHLSQSTSLNRQIAPT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00750894;
- 90% Identity
- -
- 80% Identity
- -