Basic Information

Insect: Glossina brevipalpis
Gene Symbol: su(Hw)_1
Assembly: GCA_000671755.1
Location: Scaffold354:71236-86777[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.0009 0.055 13.7 1.8 1 20 656 675 656 677 0.94

2 12 8.3e-06 0.00051 20.1 0.4 3 23 728 749 726 749 0.93

3 12 0.18 11 6.4 0.2 1 23 755 777 755 777 0.93

4 12 6.8e-06 0.00042 20.3 3.5 1 21 784 804 784 805 0.95

5 12 1.8e-06 0.00011 22.1 0.8 2 23 817 838 816 838 0.97

6 12 4.5e-05 0.0028 17.7 3.0 1 23 849 871 849 871 0.98

7 12 8.4e-05 0.0051 16.9 0.8 1 23 877 899 877 899 0.97

8 12 1.8e-05 0.0011 19.0 1.0 1 23 905 927 905 927 0.99

9 12 4.7e-06 0.00029 20.8 0.4 1 23 933 955 933 955 0.98

10 12 3.8e-05 0.0023 18.0 2.5 1 23 959 981 959 981 0.96

11 12 0.00032 0.019 15.1 3.1 1 23 995 1019 995 1019 0.92

12 12 3.4 2.1e+02 2.4 0.2 3 23 1034 1055 1032 1055 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.0009	0.055	13.7	1.8	1	20	656	675	656	677	0.94
2	12	8.3e-06	0.00051	20.1	0.4	3	23	728	749	726	749	0.93
3	12	0.18	11	6.4	0.2	1	23	755	777	755	777	0.93
4	12	6.8e-06	0.00042	20.3	3.5	1	21	784	804	784	805	0.95
5	12	1.8e-06	0.00011	22.1	0.8	2	23	817	838	816	838	0.97
6	12	4.5e-05	0.0028	17.7	3.0	1	23	849	871	849	871	0.98
7	12	8.4e-05	0.0051	16.9	0.8	1	23	877	899	877	899	0.97
8	12	1.8e-05	0.0011	19.0	1.0	1	23	905	927	905	927	0.99
9	12	4.7e-06	0.00029	20.8	0.4	1	23	933	955	933	955	0.98
10	12	3.8e-05	0.0023	18.0	2.5	1	23	959	981	959	981	0.96
11	12	0.00032	0.019	15.1	3.1	1	23	995	1019	995	1019	0.92
12	12	3.4	2.1e+02	2.4	0.2	3	23	1034	1055	1032	1055	0.93

Sequence Information

Coding Sequence: ATGTATGCTGAAAGCAGAGATATAACTAGATGTGAACAAACTGTATTACATCAACAGTTCGGAAAGATCCAGAAAGATCCTTTAGTAAAAATTAAAGAGCACATAAATAGACTTTGTCCTTTTTATGATATTTTGGATAAAATTTATGCATCGGATTCGGAGGAGAAAGTCATCAATATAGTCAACTTTCCCAACCAACCAACGATGGAGGATAATTATATGAGCGAAGAGGAACTTGAAGGAACTGTATTGTTCAGTAACGAAGAGTCTCATAGATTTAATAATGAAAATCAATTAAATGAAGACGACTACTCAGAAGACATAATAGGTTGTAGAGGTTTTTCGATGCCAAATATGCATACTAGATGCACGAATAAAATAAAACGGCAGCCTCAAATTCATTTAGATTCATCATTTGTTTCCGTTGATAATTCAATATCACCTCATGCATCAGAAGCAAGTTCTGCTAATGCCTCACGGAAAATACTTTCAACTTTAGGAATTGATAAAAGCATTTATATGCGCTCTTTGGCATACGAAACAAAGAAATTAGAAGTTGAACATGAGAAATTGCTTTTGGAACaaaaaaaaTTTAAATGGCAACAAGAAAGAGAAGGTACTGAATTGAGAATAAAACAAAAAGAAATTGATCACGATTTCgaattgaaaaaatttgaattagataaactggaaagaatggaaaaaCATTCAAACAAGTTGAATCAAGCTTTTCTATTAACACAATCGGCCACGGCATGTTTGTTAAAATTAATTTTGGAAGAGATCAAAAATCATCCGGAGGCCCTTGAGAGCCTGGCAGAAGAAAAGTTTTATAAAAACATTTCTGCAGATTGCCATCGTCTCAAGAGGACCGATTGGATGACTCTGAAAAATAAAGTGAATAATTTGAGGATCAACTATGAGGAAGCACGATTACGGAAAAAGGAATTTGATGATGTCACATTGGCGTCTAAGGGAAATGAGAAAGCGATCATAGATCAAATTTGTCCATATTACGAAATTTTGGATAAAATTTTTGGTTCTAGTTTTGAAAATTCTAATCCTTTTAAACAACAACATAATGCGAGTACTATGAAAAACGAAGACGTGTTAGAAACTATCAATCCGTGGAGTAATGAAGTACCGGGTAACAATACGATTAATGAGATTTGCTTAGTTGAGAATGATTGTGAACAAGCAGCCAATAGAGCTTTTTCAATGCCGAATATTACCGTTATCAAAACGACAAATGAAAATTCACATCCATTGAATTACATAGAGAAGTCTACAGGAGAAATAATATACAAAGTATTTTCCAAAAATTCGCTAAGCATTAAACCGACTATAGAAAGTCCTCCAGCAACCAGCTTTGTAAGAGCTGAAATAACCGAACAAGAAGCTGCTGCTACCACTTTGGAAAGTGCAAGTGATGAGACAGCTACAGAACATTTAAATCAAGTTTATCGTTACGATGTTACGGAGACACCTTTTGATACTAAGATGCAGAAGGAAGCAAACGTAACCGAGTTACCTGAACAATCAGTGTTGGATAACCATGTAATTGAAAATGATATTGAAAAGAGTGAAATTTGGAATAATGAGAATACAGCAATCCAACGTGACGATGGTGTAGAAGTATTTATTAAAGCTATTTCCATGCCGAACATACCCATCAGAAAAACCGAAAGCGAAAATCCCTCACTATCATGCTCTAAGCGAAGATACAAAGCACAAAAGATTTATGAAAAACTTTTTGCAGATTTCCCAGATCTAAGCAAGGCTACTTGGGTAGCCATTAAACGGCAATCAGAGACTGCCCAAAGATTGTGCAAAAGACAGTCTGGTGCGGGCATGCCAGCTTATGAAAATAGACCAAGAGAAGCGAAAGAATTACGCTTAACTGATGAAGAAGAACCAGATGAAATACAAGGTGGTGTCAATGAAAAAACCGAAGAAATTGTAGAGCATGTATGCGGCAAATGTTTCAAAACATTCAGACGTTTAAGGGGTTTaaaaaaaCATTTAGATTATTGTCGTTTCGATAGCGGTTATCATTTACGTAAAGCAGAAATGCTTAAGAATCTGGAGAAGATAGAGAAGGACGCAGTCATTATGGAGAATAAAGATGTTTGCTTTTGTTGCGGTGAAAGTTATGATACTTATCATTTGGGCCATATAAATTGTCCGGATTGTCCTAAATCTTTTAAAACGCAAATGAGCTATGAACGTCATATTTTTATAACTCATTCTGAATTAAATGATCATCCTTGCTCGATTTGTAATGCAAAATTGCGCAGTGCAAACTTGCTGATATTGCATGAGGAACAGCATAAAAATCGTGGCAAACCGTTTGCATGCAAAATTTGTGGTAAAGATTTTACACGTTCCTATCATTTGCATCGTCATCAGAAGTATTCATCTTGTTCGGCTAATGAAAATGACTCAATGAAGTGTAAAGTATGCGATAAAGCCTTTTATCGTTTGGATAATTTGCGTGCTCATCTTAAACAACATTTAGGTACGCATGTCACaaaaaaaCCCGAATACATGTGTCCCATATGCAAGAATTGTTTCTATAGTTTATCTACATTAAACATTCATACTCGTACTCATACGGGAGAACGTCCATTCGATTGTGATTTATGTGaaaaaaaaTTTCCATCTTTAGTGGCACTTAAAAAGCATAGACGTTATCATACCGGCGAAAAACCCTACACATGCTCTGTGTGCAAGCAATCATTTGCCGTTAAGGAAGTATTGAATCGTCATATGAAACGTCATACCGGTGAAAGACCCTATGTCTGTAATGAATGTGGTAAAAGTTTTATACAAGGCGTACAATTACGTAATCATAGTAAAACTCATTTAAGACCTTATGAGTGTAATAAATGTCCTGAAAAATTTAAAACTGAAAAACAattacaacgtcattttaaGGATCATCAAGTTTTAAGTAAACGTCGTGGACGTTCAAAATATCCTCATAGATGTGAAACGTGTAAAGTATCATTTAAAACTGAAAGTGAATATACTCAACATATGAAAAAAGGTTCACACTTAACTCCTGCCCAAAAACGTAAAATTAAAAATCGTACTGATTGTGCGGTTTGTAAACAAGATTTTGATTCTGTACAAAGTTTACAATTTCATATACTTAAAGTTCATCAAGAAGATCCGGAAAATTTTGTTAATGAAGATCCTTTTCAAAGACCAGCAGCAGCAGCAGCTGTTAGTGTTAATGTTAGTAATGAATCAAAGCAATGGGAGAATAAAGAAGACGATGATGAAGTACCACCGCCAGCACCGAAAATTATAAAAATAGAAAGCAATGAAGACATACCACACACTGAAATCATTCGTATCGTAGACACTAGTATACCAGCAAATCTTATTGATAGcaattttaataagccaaaacaacaaccaataataaaaacagatgaagcaataacaacaacaacaatTGCTACTTCCGATAAAGTTCAAATTTTACAAGAATTCGTAATTCATGATCAACCATCGACATCGACATCGGCGGTAGTCTCGTCTAATACTGGACAAACAATTATATTATCAAATGAAGCATTTACCGTTATACCATTGGAATCAGATGGTGGTATTATTGAACCTATTACTACTCATACTTTACCAAATAGTATAATTATGTCGGCACCAACTACAACAACCAAAAAATCTCAAAAGAAATCTTTAGCGGAAAGCTTAGCTGCTGCCATTGCTGATAATGATGAATTAACTACATTTGCTGAAGAAGATGAAGAGCTAAGTGAAGATGATTATAAACTTAAAGATAATGTTTATAAATTACTTGATATGTTAGTCGATAATGTTACATTaaaaaaaTTTGGTTGGCCCGAAACTACTGAGGAGAAAGTTCTATGCAAAGTTATTGAAAATTGTGGTCACGATTTATCGAAAGATCCATATAATTATCAAGAATGGGATTATGGTACACGCATGCGCGAATATGTTAAATTATTATTTACTGTAGTTATACATAACGATTCAATCAAACAACTTTTAAATAATTATCCCATTGATGAGGTGATTGAATATGTTTTAggtaatgatgatgacgatgatgatgatgatgatgatgatgaggacaatgatgaagacgacgatgagaatgagaatgaaaatgaagaggaaaaagaaattaataaATCTGGTAACGAGTCGAAGGaaaataataaaatagagagtaaagacgtaaaaagcgaaaatttgaaaacctaa
Protein Sequence: MYAESRDITRCEQTVLHQQFGKIQKDPLVKIKEHINRLCPFYDILDKIYASDSEEKVINIVNFPNQPTMEDNYMSEEELEGTVLFSNEESHRFNNENQLNEDDYSEDIIGCRGFSMPNMHTRCTNKIKRQPQIHLDSSFVSVDNSISPHASEASSANASRKILSTLGIDKSIYMRSLAYETKKLEVEHEKLLLEQKKFKWQQEREGTELRIKQKEIDHDFELKKFELDKLERMEKHSNKLNQAFLLTQSATACLLKLILEEIKNHPEALESLAEEKFYKNISADCHRLKRTDWMTLKNKVNNLRINYEEARLRKKEFDDVTLASKGNEKAIIDQICPYYEILDKIFGSSFENSNPFKQQHNASTMKNEDVLETINPWSNEVPGNNTINEICLVENDCEQAANRAFSMPNITVIKTTNENSHPLNYIEKSTGEIIYKVFSKNSLSIKPTIESPPATSFVRAEITEQEAAATTLESASDETATEHLNQVYRYDVTETPFDTKMQKEANVTELPEQSVLDNHVIENDIEKSEIWNNENTAIQRDDGVEVFIKAISMPNIPIRKTESENPSLSCSKRRYKAQKIYEKLFADFPDLSKATWVAIKRQSETAQRLCKRQSGAGMPAYENRPREAKELRLTDEEEPDEIQGGVNEKTEEIVEHVCGKCFKTFRRLRGLKKHLDYCRFDSGYHLRKAEMLKNLEKIEKDAVIMENKDVCFCCGESYDTYHLGHINCPDCPKSFKTQMSYERHIFITHSELNDHPCSICNAKLRSANLLILHEEQHKNRGKPFACKICGKDFTRSYHLHRHQKYSSCSANENDSMKCKVCDKAFYRLDNLRAHLKQHLGTHVTKKPEYMCPICKNCFYSLSTLNIHTRTHTGERPFDCDLCEKKFPSLVALKKHRRYHTGEKPYTCSVCKQSFAVKEVLNRHMKRHTGERPYVCNECGKSFIQGVQLRNHSKTHLRPYECNKCPEKFKTEKQLQRHFKDHQVLSKRRGRSKYPHRCETCKVSFKTESEYTQHMKKGSHLTPAQKRKIKNRTDCAVCKQDFDSVQSLQFHILKVHQEDPENFVNEDPFQRPAAAAAVSVNVSNESKQWENKEDDDEVPPPAPKIIKIESNEDIPHTEIIRIVDTSIPANLIDSNFNKPKQQPIIKTDEAITTTTIATSDKVQILQEFVIHDQPSTSTSAVVSSNTGQTIILSNEAFTVIPLESDGGIIEPITTHTLPNSIIMSAPTTTTKKSQKKSLAESLAAAIADNDELTTFAEEDEELSEDDYKLKDNVYKLLDMLVDNVTLKKFGWPETTEEKVLCKVIENCGHDLSKDPYNYQEWDYGTRMREYVKLLFTVVIHNDSIKQLLNNYPIDEVIEYVLGNDDDDDDDDDDDEDNDEDDDENENENEEEKEINKSGNESKENNKIESKDVKSENLKT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -