Gbre004415.1
Basic Information
- Insect
- Glossina brevipalpis
- Gene Symbol
- lola
- Assembly
- GCA_000671755.1
- Location
- Scaffold3:3876221-3886611[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 8.4e-10 1.5e-06 27.5 0.0 4 45 465 506 462 506 0.88
Sequence Information
- Coding Sequence
- aaaatttttttacaaaacaaaaaacgttttttaaaaatttacaaaaactttaaaGAATATCGAGGCCAAAAGGCATGTGATTTGATTATATTTTCAAAGCTGGCTCTCAAGTATCGCAAATATTTTGCCCGTTACTCAGGCCATACGAATTTTCCAGCACCGGTTTTGTCACAGCCCCAAGATCAAAGAGGTATTCATCAATTATCTACTTACACAATGGACGGCCCACCGCCCGGACCTTCTTTGGGCGAAGCGCAAACCTATTGTCTACGATGGAATCTTCATCAATCGAATTTGGTCGATATATTAGATGTCCTTTACAAGAGAGAAAATTATGTTGATTGCACGATAATCGTTGATGACAATGAGAAATTTAAGGCTCATCGCGTAGTATTGGCGGCCAATTCACCATATTTTCATAGCATACTACAGGATGTTCCTGGAGAACACTGCAGCATCATATTTCCAGGTGTGAAAAAATATGAAATGGAGGCCTTACTTGAATATATGTATACGGGGGAAGTGGATGTAACTCAAAGTCTAATACCAAGAATAATGCGTATTGCCGAAGAATTGAAAGTGAAAGGACTTTTTGATATGGCCGATCTTAAAGAGAAATTTAATAAGCCAAACGAAGAATGCAATGAGAGACAAATTAACTCTAATCGTTGTACACGAGCAATGAGTCCTGACGTTCTATATCGTTCCCCAGCTTCAACATCATCCAATTGTGCTCAAAATCCTCGAATAACGAAAGACAATGATAACTTGGATCACCAACCTCATGAGTCATCGCTAATATCTACCTCTTCAAATATTTCACCGAGCAGTACACAAAACTTTGGTTTAATGGCTCCAGTTCCAGGTGGTCAATGGACTATGTCACCGTCGTCGGCTGCAGCTGCCATGATCAATTCGGTGTGTGATCCAGGCAATGATATACATTCGTTAAAACATACGGCAGAAGTGTCTTCTTTCTCTCACTTAGTAAACGGTGAAGATACTCCCATATTACGTAATGTTTTAGGCCACTCTAATCCAGCCGATTCATATCAATCCTTGCCTTTAGTTCTACCTAGTACCTCGGCGGCAGCAACAGCCGCGGCAGCGAAAGGAGATGTTAGCTCGTCAGCCCATATGGTAGGTCAAAGTAGTCATGGCTTTAGTTTAAACGGTTCTGATTACAGCAGCGATCGGCAACCTGATCATCATTCGCAGCTTCCACAGCAGCAACATGATGAACAGCATTCACCTTTAACTGATCGCTCTTTTGACGATGAGGGAACGTACGCAAATCGAAGCAGTAGCAGCAGTTACGATAGTAATTTAAATAATGCACCGACAGGAAATCAAAAACCGGAATGGAAACGTTATAAACAATATACTCGCAATGATATCATGTCGGCTATTCAATGTGTCAAACAGGGTATGACTGCTTTGCAAGCGTCGCGAAAATTTGGTGTTCCCTCCAGGACCCTTTACGATAAGGTaaaaaaaCTAGGGATAACCACAGGTCGTCCAATGAATCGCACTTTGAAGCGAAGTCCTACCAATGTGGAATCTTCGGCAGCTTTCCCTTATGCTCACACATATGGCCAAACATCAACATCGGTAGCAATAGCAGCCGCTGCCGCTATGCATGATGCTAATCGCGAAAGCAGCGAGTTAAAAGATCAATTACAGCGTCCCAGTGAGCCTCCCCACCATTTGCCACAAACAATTACTCATCCAACTCTATTAGATCGTGCCTTCTTGCAACAAGCATTGGAGAGTAGAGGCGGAGGCGACATAGCCGGCCGTGAAGCCTTACATGCTATGGCTTTAGCCAAAGTAGCTCAAGCCGTCGTTAATCACATATCCACCAATCCAGGGGCAAACGGTAATGCCGCTCGTTCTCCTAGTCCAGCCACTTTTCCTTTAATCAAATACTGTAGTATGCATATAGACGATTCCGAAGGTTTAGTAGAACGTAGCATTAGCGGTAACAATCTTGAAAGGCCTCATCAAACCATGGAAATTGACGATGATAATCACGCACAAGATTTAACAGTTAATCGGAAAATAATTAAGTCACCTTCTTCTACTGCGGTAGAACAAAGGGAACAACGATCACTATCGATTAACACTTTGCCAGCAGCATCTCAATCGCACAGTTCACAGGAGACTGAAAGAACTGTTATAATGAACACAAAATTGCCATTAAATCTTAGCGATGATTTTATGTCTGAGTCGACAATGAAGAGAGAAGTTATTGAGGATACACGAACTGATTGA
- Protein Sequence
- KIFLQNKKRFLKIYKNFKEYRGQKACDLIIFSKLALKYRKYFARYSGHTNFPAPVLSQPQDQRGIHQLSTYTMDGPPPGPSLGEAQTYCLRWNLHQSNLVDILDVLYKRENYVDCTIIVDDNEKFKAHRVVLAANSPYFHSILQDVPGEHCSIIFPGVKKYEMEALLEYMYTGEVDVTQSLIPRIMRIAEELKVKGLFDMADLKEKFNKPNEECNERQINSNRCTRAMSPDVLYRSPASTSSNCAQNPRITKDNDNLDHQPHESSLISTSSNISPSSTQNFGLMAPVPGGQWTMSPSSAAAAMINSVCDPGNDIHSLKHTAEVSSFSHLVNGEDTPILRNVLGHSNPADSYQSLPLVLPSTSAAATAAAAKGDVSSSAHMVGQSSHGFSLNGSDYSSDRQPDHHSQLPQQQHDEQHSPLTDRSFDDEGTYANRSSSSSYDSNLNNAPTGNQKPEWKRYKQYTRNDIMSAIQCVKQGMTALQASRKFGVPSRTLYDKVKKLGITTGRPMNRTLKRSPTNVESSAAFPYAHTYGQTSTSVAIAAAAAMHDANRESSELKDQLQRPSEPPHHLPQTITHPTLLDRAFLQQALESRGGGDIAGREALHAMALAKVAQAVVNHISTNPGANGNAARSPSPATFPLIKYCSMHIDDSEGLVERSISGNNLERPHQTMEIDDDNHAQDLTVNRKIIKSPSSTAVEQREQRSLSINTLPAASQSHSSQETERTVIMNTKLPLNLSDDFMSESTMKREVIEDTRTD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00748147;
- 90% Identity
- iTF_00747587;
- 80% Identity
- iTF_00747587;