Gbre011101.1
Basic Information
- Insect
- Glossina brevipalpis
- Gene Symbol
- bab2
- Assembly
- GCA_000671755.1
- Location
- Scaffold316:60053-63993[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 1.9e-07 0.00035 19.9 0.0 5 37 376 409 372 415 0.84 2 4 2e-13 3.6e-10 39.1 0.0 1 44 431 474 431 475 0.95 3 4 0.012 21 4.6 0.0 27 37 504 514 503 519 0.90 4 4 2.9e-17 5.3e-14 51.4 0.1 4 41 543 580 543 582 0.93
Sequence Information
- Coding Sequence
- ATGAACCATCTTAAATGGATGGGCCACTCGGCCACCATATTGGACATACaaaaaaaTCTACGTAGCGATTTGGAAAGTTGTGAAGTAACATTAGTTGCCAAGGGCCATTCCGTGAAAGCTCACCGCTTCGTATTGTCATCCTGCAGCGATTTAATGCGTTGTCTATTAACGGATATACCTATGGGACAAGAATGTACACTGATGGTACCCGATATTAAGGGCATTTTGTTAGATAGTGTCTTAGCGTTTATATATCTGGGTGAAGCGTGTATATCAGCTATTAATTTATCAGAATTTCTGGAAGCAATTAATGTTTTGGGCATTAAGTCAGCCATTAGCTTTGAATGTCACTCGAATTCGTCACGAAATACCAGCACTGATAATGTATCATCCAGTTCGCCTACGCCTGTAGTGACGCGGGTTGTAGGCGGTAGTTTGACTTTAAGCCATGAGGAAATGATCACCCACGAGAGCATAACACAGAAATTGGAACCGGCAAATATTATACCGGCCGAAACATCAGTAACAACCGCCAATGCGACTAACACAGCTAACAGAGATTTGGAATTTCTGGACGTCTATCATGATCTGCAAAATAAATTTACTTATTCTATAGAGCATGTGCCAGGTGTCGCGAACGGCAATGAATTTATACTAACCGAAAATTCAGGCACTTATACATTAACGCAAAATCCCAAACTAGAAACCGCCTCAAGTACGGCCTCGGGAAATATGGATACCAATGAGGATGAAGGTGTCGAAATTCATATAAGCGAAGAGTATAGTAGCAATGATGAGAACATTATGCAATTAGAGGAATCAGCACCTGAAGTTACAGTTACAAATACCAATTCTTCGGCTACTCACAGCGATAATACTGATAATAACGTAGTTGAAGTAAAGTCAAAAATAAAAGCTATAAAATTAAAGTCTCGGACCGGCACCGCTAATACTGCCAAATTGGACACTACAATGGATGCCACGAATGTCTCAGAAGATCCTATTTCTATAATACAGACACATGAAGATTTTACTATACTTAAAGAAAACGGTAACAATGAAAATGTTGGAAGCAATGATTCAGGTGCAAGCGGTTTAGTCAATTCCAGTCCATCGCAGACGCCGATTGACTTAGCTTATCAAGCCATGGTAAACGAAGGCTTGAGTTTGCCTAAAGCGGCTGTCAAATTTAATGTATCAAAAACTGAGTTATGGTGCCGAGTACGCAGCACTGGTGTTGAAAATTATATGTCATCGGCGGCAGAATCTGATTCCGTTCGTCCAATGAAAAAAGAAGACGCAATCGAAATGGCCTGTCAAGTTGTTATTTCTGACGGTTTGAGTCTACAGAAAGCAGCTATGAAATTTGATATATCAAAAACTGTTCTATGGCGTCGTGTTCGTAAGCATCCCGATTATATGAAAACTGCTCGCGAAAATCCTATCGTCACTAAAGCCTATGAACGCCTAAAAAGTGGGGAATCTTTGAAAAGCATTAGCCTAGACTTAGACATACCTATGTCGACCTTACACCGTCATAAAGTACGATTATCTCAACAGGGCCAATTGCCGGATTTTGTTACTTGCAAACGACGTGATTCCACCTCAAAGGATGATCTTAAGATTAAACTTGCTAAGGCGGTGCACGCCTGCGTACATAAAGGCATGTCCCAAAACCATGCTGCGAATTTGTATGGGATATCTAAGAGTACGCTATGGCGCCATCTCCAAAAACGGGTCGCGGAAGCCGAAGCGTCGGAGGCTGCTGAACAATCTACAGAATCTATGGAAGAAGATGAAATCAAAGAAGAAGTTATACTATCCACATATCCTTCATCAGTGCAAATAGCTGCCGCTTTAATTAATTAA
- Protein Sequence
- MNHLKWMGHSATILDIQKNLRSDLESCEVTLVAKGHSVKAHRFVLSSCSDLMRCLLTDIPMGQECTLMVPDIKGILLDSVLAFIYLGEACISAINLSEFLEAINVLGIKSAISFECHSNSSRNTSTDNVSSSSPTPVVTRVVGGSLTLSHEEMITHESITQKLEPANIIPAETSVTTANATNTANRDLEFLDVYHDLQNKFTYSIEHVPGVANGNEFILTENSGTYTLTQNPKLETASSTASGNMDTNEDEGVEIHISEEYSSNDENIMQLEESAPEVTVTNTNSSATHSDNTDNNVVEVKSKIKAIKLKSRTGTANTAKLDTTMDATNVSEDPISIIQTHEDFTILKENGNNENVGSNDSGASGLVNSSPSQTPIDLAYQAMVNEGLSLPKAAVKFNVSKTELWCRVRSTGVENYMSSAAESDSVRPMKKEDAIEMACQVVISDGLSLQKAAMKFDISKTVLWRRVRKHPDYMKTARENPIVTKAYERLKSGESLKSISLDLDIPMSTLHRHKVRLSQQGQLPDFVTCKRRDSTSKDDLKIKLAKAVHACVHKGMSQNHAANLYGISKSTLWRHLQKRVAEAEASEAAEQSTESMEEDEIKEEVILSTYPSSVQIAAALIN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00746630;
- 90% Identity
- iTF_00747604;
- 80% Identity
- iTF_00747604;