Gaus006381.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Glossina austeni
Gene Symbol
nfxl1
Assembly
GCA_000688735.1
Location
Scaffold2:2231512-2239952[-]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 20 2 1.9e+04 -8.2 6.4 15 19 196 200 195 200 0.82
2 20 0.14 1.3e+03 -0.4 0.4 4 10 231 237 230 237 0.95
3 20 1.4e-07 0.0014 18.8 14.0 1 18 245 261 245 262 0.94
4 20 1.5 1.5e+04 -3.7 2.4 6 10 288 292 287 292 0.89
5 20 2.5e-07 0.0024 18.0 15.4 1 19 298 317 298 317 0.97
6 20 1.5 1.4e+04 -3.7 1.5 6 10 342 346 341 346 0.87
7 20 4e-09 3.9e-05 23.7 12.3 1 19 352 370 352 370 0.99
8 20 1.7 1.7e+04 -3.9 0.8 6 10 395 399 394 401 0.54
9 20 4.3e-08 0.00041 20.4 12.4 1 18 405 422 405 423 0.96
10 20 0.74 7.2e+03 -2.7 0.4 1 5 432 436 432 441 0.73
11 20 2 1.9e+04 -5.0 2.3 5 10 446 451 446 451 0.91
12 20 8.7e-06 0.085 13.0 14.4 1 18 457 474 457 475 0.97
13 20 2.8e-10 2.7e-06 27.4 15.3 1 18 484 501 484 502 0.99
14 20 0.056 5.5e+02 0.8 10.2 8 19 546 557 538 557 0.89
15 20 0.0065 63 3.8 6.6 1 12 569 579 569 579 0.96
16 20 0.34 3.3e+03 -1.7 0.9 6 10 638 642 637 642 0.90
17 20 1.1e-05 0.1 12.7 4.5 1 11 648 658 648 659 0.99
18 20 0.0024 23 5.2 15.2 3 18 688 703 687 704 0.94
19 20 2 1.9e+04 -6.9 3.1 10 13 711 714 710 714 0.68
20 20 1.4e-06 0.013 15.6 11.2 1 17 755 773 755 775 0.86

Sequence Information

Coding Sequence
ATGGAGGAAATGGCGTCCTCTATGTTGTCCGCAGAAGCGGGTAACAACGTGCACAATATACCTGCAGTTACGACGCAGGATGATGCACTGGCTTCGAATGCACGCTTACGTGCCAATAAACCATTTCCTATTGTCGGGGATAAGACAAATGATAAAAACACTAGTCGAAAGTTTTATGAAGCACATGCTAAGAATTTAGAAGCTGCaaaaaaaTTGGTGGAAAAATACGTTTCCTCATCTGAAGAGGAAGACGAATTGGATGAAACGAAAATCTTAAAAGCGCTGTACGAGAATTATAGTGATCGTAAAGAAGACGAGCACTTATTAGCCAAGACAGCAAGTTTCCTAGAAAACATATTGCATTCCGGTTCAGCTACTTGTCTTATATGTATAGCTAGTGTAAAGAGGACGGACGCAATATGGTCGTGTAAACATTGTTATTGtttttttCACTTAAATTGCATACGTCGTTGGGCTAATGATAGTATGGCCCAGCGTAAAGTACAGGAACGCAACACTCAAGGTTATTACAATCACTTGGGTGAATATGTACCTCCCAAAAAGGAGAGAGCTTTGCATTGGTGCTGTCCACAATGTAGGCGAGAATTTCAACCAAACGAAAAGCCTGCAACATATGAGTGCTTTTGCGGTAGAGAAACTGATCCCTTACCACAGCCGTGGTTATTACCCCATTCTTGTGGCGAAATATGCAGTAAACTTTTACAGCCTAATTGCAGTCATAAATGCAACATACTCTGCCACCCAGGACCATGTCCACCATGCGCTCAATATGCAATAATATCCTGCAAATGCGGGAAATCCCAGCCAAAATCGATGCGCTGCTTAGAAAAAGATTGGGAATGTCAAGAAAAGTGCAATTTATTATTACCCTGCGGCCGACATAAGTGCCGTCAACTTTGCCATAAACCACAGCAGTGTCCACCATGTAGTCAAAAAAGTATTCAAACTTGCGAATGTGGCGCAGAATCGATGAGACGCCAATGCTGTGAGCGGAAGTGGCAATGTCAACAGATGTGTAGCAAATTGTATGCATGTGGCATACACATCTGTAAGAAAGTTTGTCATTCTGGGGACTGCGGTGAATGTCCATTAAGTTTGCCGCGTTCTTGCCCTTGTGGCAAAACTAAAAAAGTTGGACCGTGCACGGAAATTATTGATACTTGCGGAGACACCTGCCAAAAAATTCTTGCTTGCGGTCAGCACACTTGCACCCAAAGATGTCACAAGGGTAGCTGTAATTTGTGTCTAGTTATTACTAAGAAAAAATGCCGATGTGGTTTACATGAAAAGGAGCTGCCGTGTTCAAAGGAATTTACTTGTGAAACCAAATGCAAACAAAGCAGAGATTGTGGCATACATTCTTGCAATCGCAAGTGTTGCGATCGCAATTGTCCACCTTGTAATAAATTGTGCGGTCAACCATTATCCTGCGGTAAGCATAAATGCCAATCGGTCTGTCATAAAGGTCCTTGTTATCCATGTGGACAACAATCTCAAGTCAATTGCCGTTGTGGAAAGACGCGTAAAAGTGTACCGTGCGGAAGGGAACGTACCGTGCGTATAGCTTGTTTAGAACTTTGCAAAATACCTTCGAAATGTCATCATGTAAATCAGCATCGTTGCCATAAAAATGAATGTCCACCTTGTTCTCAAATTTGTGGCTTACCAAATAATATTACAGGTTGTGGTCATATCTGCAAGGCCAAATGCCATAGCTATGTGAAGGTATCGAGTAAATCAAACTCGGATTCTGTCCATATTTGGGAGGCCACTAAAAGGATTGAATATAAATCACTACCTCATCCTCGTTGCGAAGAGAAAGTGTTAGTTGCTTGTATAGGAGGTCATGAAGTAGAAGAACGACCGTGCTGGAACTCAAAACCGAACTCTTGTCAGCGTTTATGTAATCGTCAGCTACCCTGCGGAAACCATAAATGCACATTGATCTGTCATTTTGTATCCCATCCCGATAATATGGAGGCTCAACAAGGTTGCATGTCCTGCGAAAACGGTTGTAACATACCGCGACCTAATGGTTGCATCCATAATTGCCCTCGACCGTGTCATTTGCCACCTTGTAACCCTTGCAATGTAGTCATTAAAACAAAATGTCATTGTGGTCTAATGCACATTATTTATAAATGCTGTGATTATTACAACAATCAAGGCAATGACTCTGATATGAGTGAACGGCAAGAACGTTTAAAAAGCTGCGGGAATCGCTGCTTAAAAAATTATTCCTGTGGCCACCGGTGCGCTGCACAATGCCACGCAGGCCCTTGCCCGGAAGCTAATAATTGTCGCAAAAGATTACGCATTTACTGTGAGTGCAAACGTTTAAAGCAAGAGATTTCTTGCGATAAACATCGCTCAGGGCTCACTAAATTGATGTGTGATGACAATTGTCGGGAAATCATCAAGAAGTCAGAAATGTCGCGTCAGATGGCAGAGGAATCGTTGCGTAAGCAAGAAGAAGAACGTAATCGGTTAGAAGTGGAGCAATTTGAGAAGAGATTTAATAAACGCAAACATAAAGAACGAAAATCAGTTGAATTAAAAGAAAAGCGCGAGATCAACTGGAAATTGCTGTTCATGTACGCGGGCATCTTTTCTGCGATACTCTTGGCCGTTGGTTTGGCATTTTACGAAGATCATTAA
Protein Sequence
MEEMASSMLSAEAGNNVHNIPAVTTQDDALASNARLRANKPFPIVGDKTNDKNTSRKFYEAHAKNLEAAKKLVEKYVSSSEEEDELDETKILKALYENYSDRKEDEHLLAKTASFLENILHSGSATCLICIASVKRTDAIWSCKHCYCFFHLNCIRRWANDSMAQRKVQERNTQGYYNHLGEYVPPKKERALHWCCPQCRREFQPNEKPATYECFCGRETDPLPQPWLLPHSCGEICSKLLQPNCSHKCNILCHPGPCPPCAQYAIISCKCGKSQPKSMRCLEKDWECQEKCNLLLPCGRHKCRQLCHKPQQCPPCSQKSIQTCECGAESMRRQCCERKWQCQQMCSKLYACGIHICKKVCHSGDCGECPLSLPRSCPCGKTKKVGPCTEIIDTCGDTCQKILACGQHTCTQRCHKGSCNLCLVITKKKCRCGLHEKELPCSKEFTCETKCKQSRDCGIHSCNRKCCDRNCPPCNKLCGQPLSCGKHKCQSVCHKGPCYPCGQQSQVNCRCGKTRKSVPCGRERTVRIACLELCKIPSKCHHVNQHRCHKNECPPCSQICGLPNNITGCGHICKAKCHSYVKVSSKSNSDSVHIWEATKRIEYKSLPHPRCEEKVLVACIGGHEVEERPCWNSKPNSCQRLCNRQLPCGNHKCTLICHFVSHPDNMEAQQGCMSCENGCNIPRPNGCIHNCPRPCHLPPCNPCNVVIKTKCHCGLMHIIYKCCDYYNNQGNDSDMSERQERLKSCGNRCLKNYSCGHRCAAQCHAGPCPEANNCRKRLRIYCECKRLKQEISCDKHRSGLTKLMCDDNCREIIKKSEMSRQMAEESLRKQEEERNRLEVEQFEKRFNKRKHKERKSVELKEKREINWKLLFMYAGIFSAILLAVGLAFYEDH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00750138;
90% Identity
iTF_00749372;
80% Identity
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