Gaus009435.1
Basic Information
- Insect
- Glossina austeni
- Gene Symbol
- pnr
- Assembly
- GCA_000688735.1
- Location
- Scaffold104:533863-539049[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.2e-18 1.6e-14 53.3 3.2 1 34 186 218 186 220 0.97 2 2 4.9e-19 2.4e-15 56.0 6.2 1 35 240 273 240 274 0.98
Sequence Information
- Coding Sequence
- ATGAATATTCTCGTGTTAACGGTTAAATATGAATACGTAACGCAGCCTTTGCCTATTAGCCAGTCTCCTTCGGTAGCTCCTCATCAGAGGCAAGTTCAACACGAACAGCATTTAGACTTGCATACCGAATCAGTAGATATAAGTCACGATCGTCGCCAATTGCCACAACATATTCCGCAAACTACAAAAATGTATCATTCGGGAGCCGGTTACCCGGATTTAACAGGCAATGCAGGTGCGACTGGGGTATCTTCGTATCATCAGCAAGCTGCCGCAGCGGTGGCGACAGTCAGTGCTCCTGTCTACGTACCCTCCAATCGTGCTTTAACTAGCAGTCAATATCAGCACGTAGCTGCTCACTTTGGTACAGCGGCCGCCCAAAATGCGTGGACATCGGATAGTTTTGGTACCGCTCATGCACAATTGCCTCCCCAGTTTTATACACAAAATGCCGTTATGATGGGTTCGTGGCGGGCTGCTTACGATCCGACAGGTTTTCAACGTTCCTCACCTTACGATAGCGCAATCGATTTTCAATTTGGCGAAGGTCGAGAATGTGTAAATTGTGGTGCTATTAGTACGCCGCTATGGCGACGTGATGGTACTGGTCATTATCTTTGTAACGCTTGCGGTCTATATCATAAAATGAACGGCATGAATCGGCCGTTGATTAAACCAAGCAAGCGATTGACTGCTACCCGTCGTTTGGGTTTATGCTGTACTAACTGCGGTACTCGCACCACAACTCTTTGGCGCCGTAATAACGAAGGCGAACCAGTGTGCAACGCTTGCGGTTTATATTTTAAATTACATGGTGTGAATAGGCCTTTAGCTATGCGTAAGGACGGCATTCAAACGAGGAAAAGGAAACCGAAAAAGTCAAGTAGTTCCTCGGAAAATAGTAAAGATATTAAAGATGAGGATCATAAGCCATCATTAGCTTTGGATCGGCACAGTTTAACGGGCAGTCTAGCGTCAAGATTGCAAAATGACTTAGGGGTTAAAGGCACGAATAACAGTACCTCAGTACTACATACTTTAAGTTTGGGTTCTGCCAGTTCCGCTTTGCACAATTCCTTGAGTCATCATCATATGCATATCCCGTCCACTTCCTCTGCGCAACAAAGTAGACTGTCGTCACAACATAGTGCGATCACGCATACATCTGCCGCAAATAATATAAATGGTTCCAGTGCAGCAACGTCGACATCAGCGAATTTAACGCATAACACAAATTTGTGTTCATCTTCGGCCATAACGATGCAAAGTAACTTGGGCCACTCTCAACTCTCAGGTACTGCCTTTAGTTCTCATCCTGCAGCTCCCACTAAATACGAGCATTTACTTGGCTCTACAAATTCACTGACAAACGGTCTTACCGCGCCCGGAACAGGTTCATCAAGTTCCAattatcatcattcacatcatttacatcatcatcatcatcatcatgcggcagcagctgctgtccatcatgctacccatcatcatcaacatcattcatcttcattaagccatcatcatgtaagctcatcGGCAGGTCCCGGCAGTACGGGCGGCATGGGCTACAGTGTCAAGGCAGAGAGCAGTGCTACAAATTACGATTACGTGAATAATTGTTATTTCGGCAGTTCCTTTGGACATTTGGGTAGTAGTCCATCATCGGCGACAGCAAGCGGACTTCATGGCAATGCTGCCAGTGATATGGCTGGTGTTTATCATCATCAACACAATGTTATACAGGCGGCCAAATTAATGGCCACTTCTTAA
- Protein Sequence
- MNILVLTVKYEYVTQPLPISQSPSVAPHQRQVQHEQHLDLHTESVDISHDRRQLPQHIPQTTKMYHSGAGYPDLTGNAGATGVSSYHQQAAAAVATVSAPVYVPSNRALTSSQYQHVAAHFGTAAAQNAWTSDSFGTAHAQLPPQFYTQNAVMMGSWRAAYDPTGFQRSSPYDSAIDFQFGEGRECVNCGAISTPLWRRDGTGHYLCNACGLYHKMNGMNRPLIKPSKRLTATRRLGLCCTNCGTRTTTLWRRNNEGEPVCNACGLYFKLHGVNRPLAMRKDGIQTRKRKPKKSSSSSENSKDIKDEDHKPSLALDRHSLTGSLASRLQNDLGVKGTNNSTSVLHTLSLGSASSALHNSLSHHHMHIPSTSSAQQSRLSSQHSAITHTSAANNINGSSAATSTSANLTHNTNLCSSSAITMQSNLGHSQLSGTAFSSHPAAPTKYEHLLGSTNSLTNGLTAPGTGSSSSNYHHSHHLHHHHHHHAAAAAVHHATHHHQHHSSSLSHHHVSSSAGPGSTGGMGYSVKAESSATNYDYVNNCYFGSSFGHLGSSPSSATASGLHGNAASDMAGVYHHQHNVIQAAKLMATS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00747881; iTF_00749358; iTF_00750119; iTF_00750893; iTF_00748649;
- 90% Identity
- iTF_00749358;
- 80% Identity
- -