Basic Information

Insect: Glossina austeni
Gene Symbol: -
Assembly: GCA_000688735.1
Location: Scaffold70:524599-529403[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 9 6.8e+02 1.2 0.8 1 18 61 78 61 78 0.85

2 14 0.061 4.6 8.0 2.3 1 23 122 145 122 145 0.95

3 14 0.00012 0.0091 16.5 0.9 2 23 152 174 152 174 0.97

4 14 9.2e-06 0.0007 20.0 6.5 1 21 183 203 183 206 0.96

5 14 3.1e-05 0.0024 18.4 4.6 2 23 467 488 467 488 0.97

6 14 2.6e-06 0.0002 21.7 6.0 1 23 494 517 494 517 0.95

7 14 0.005 0.38 11.4 4.9 1 23 522 545 522 545 0.97

8 14 1.1e-05 0.00081 19.8 2.0 1 23 555 577 555 577 0.97

9 14 1.8e-06 0.00014 22.2 2.2 1 23 582 605 582 605 0.98

10 14 3e-05 0.0023 18.4 0.8 1 23 611 633 611 633 0.96

11 14 9.3e-05 0.007 16.9 1.9 1 23 639 661 639 661 0.98

12 14 4.8e-07 3.6e-05 24.1 1.6 3 23 669 689 668 689 0.99

13 14 4.3e-07 3.2e-05 24.2 0.4 1 23 695 717 695 717 0.99

14 14 0.0027 0.21 12.3 0.0 1 23 722 745 722 745 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	9	6.8e+02	1.2	0.8	1	18	61	78	61	78	0.85
2	14	0.061	4.6	8.0	2.3	1	23	122	145	122	145	0.95
3	14	0.00012	0.0091	16.5	0.9	2	23	152	174	152	174	0.97
4	14	9.2e-06	0.0007	20.0	6.5	1	21	183	203	183	206	0.96
5	14	3.1e-05	0.0024	18.4	4.6	2	23	467	488	467	488	0.97
6	14	2.6e-06	0.0002	21.7	6.0	1	23	494	517	494	517	0.95
7	14	0.005	0.38	11.4	4.9	1	23	522	545	522	545	0.97
8	14	1.1e-05	0.00081	19.8	2.0	1	23	555	577	555	577	0.97
9	14	1.8e-06	0.00014	22.2	2.2	1	23	582	605	582	605	0.98
10	14	3e-05	0.0023	18.4	0.8	1	23	611	633	611	633	0.96
11	14	9.3e-05	0.007	16.9	1.9	1	23	639	661	639	661	0.98
12	14	4.8e-07	3.6e-05	24.1	1.6	3	23	669	689	668	689	0.99
13	14	4.3e-07	3.2e-05	24.2	0.4	1	23	695	717	695	717	0.99
14	14	0.0027	0.21	12.3	0.0	1	23	722	745	722	745	0.95

Sequence Information

Coding Sequence: ATGGATATTAAAGTGCAACCCAATCACAATATCATATGTCGGATATGCTTGCAGGAGAACATTAATTTATATCCTATTGAGGACCAAGTTCAAGTTCTTGAGGATAGAATAGCTACGTTGGCTGAAATTATAACAGAATGCACAAAATATCCAGTGTTGGATAGCGATCAGTTGCCGACGCACATCTGTAATGTTTGTAAGGAGGCGGCACGCACAGCATACTGCTTTAAAAGGCAAACAGAAAAAGCGTATTGTCGTTTAAAAGCCTATTACGACAAAACATGGACGCCGAAAGATGAAAAACGGATTTCCAAAGTTCCAAGCACACGCGAACAATTTACCCAAACGGAACACAAGAATTGTCATCAATGTGAATCGTGTCCAAGAAAATTTTTTAAGGGACGAGAACTGCGTGAACATAGAATGCAGGAGCATAGCAACGATAATGGCCGTAAGTGCCGCGTTTGTGGCGAGAAATTTATACATTTGGGTCAATTGAAAGTTCATCTATCCACTGAACATCCCAATGAAGGTATACATTGTGACTTCAAATGCAGTACTTGTTCGAAAGTATTTTCGCGTAAAGATCATCTGAAACGGCATTTACGTTGCGTACACAAATACGAGTTGGAAGAAGATAAAATTAATAATAGGGTTCAGTTAACTCTCGATGAACCAGAAATTGAGTTTGAAAAGCAAGTGAATCCGACAAACAATACCGCTGCAATTACGGCTACTACTTTGATAGGAGTTGATACTGATACTAGTTTAAACAATCACAGCAGCCATTGGTTGGACTATGAGGATGAGGAGGAGGCTTTACCTCAAGTAAGTGATGAACAACACGCTAGCATGGCTGCAGTTAATCCATTCTCTAGCGATGACGATGAAGAAAATGTATATCAGATaaaaaaaTGTGATAGCTTAAGTAGCGGGGAACAAGAAGATATTAAAGAGTTTGCCGAATATGTAGTACAGCCCGAGATATCAATAAAAGTGGAAAATACGGAAGACAGTTTTAATTTTAATGAATTCGTGAAAGAAATCGACACGCCGAGAGAAAAACGTTTAGTTACAACAATAGCAAGTCTAACAGATTTAAAACGTGAAAAGCCTCTTTCCGAGGACGAAGTGCAAGAAGAAAACAAGCAACACTTGGGTGATGAGAATAATGATCGCGATTGTGGACCAATTTCTGACACTGAAAATATGGGTGAAGAGAATCCTAATAATGATAAtaaagttttaaaacgaacgaaaaacgtaagagcttttaaaacaatgaaaaaagagatgaaagagactgagaaaaatatacgtaaaaataataatTTTGTTAGCAACGTGAAGGGCCACACCACGCGAAGACGTTACGGTGCATCCAAGAATGAAGAAAATCGTTGCTTACAATGCAATCGAACTTTTTCACGTTACAATCATTTATTACGTCACATGTTAACGCATAGCGATGAAAAACCGCATGTATGCTGTTATTGCGGTAAGCGTTTCTCGCGTAGCGATCATCTACAGAAGCATATCGCCAGTCTGCACACTGAAAAACAATTCAAATGTGATCAGTGTGCATGTGCCTATGGACGCAAAGACCATTTGCAGCGTCATAAAGAAACACGTCATGGTAACAATCCGCCCCCACCCAAACTATTTGAGTGCGATATGTGTGAGAAGAAATTTACAACAAAAGCATATCTGATGAAGCACAAACAGTTGCATGGAGCTAGACTGTATGTCTGCAAGCACTGTCCGGAAACATTTAACGATAAAGACCTACTTAAGGAACATCAAAAGAAAATGCATACGCAACCGCGAAATTTCCTATGCAGCATATGCGGCGATAGTTTTCAACGTAATGAATACCTTAAAATACATATGCGTAGGCACACCGGCGAAAAACCTTATAAATGTCGTTTTTGCGAAAAAGGCTTCCCGCGCAGCACCGACTTGAAAATGCATGAAAGATATCATATAGGCATTAAGCCAAATTTGTGTAATCTGTGTGGCAAAGGTTTTCATCGGCCTTACAATCTCACCATACACATGCGTACGCACACTGGCGAAAAACCATACAAATGCACTCAATGTCCTCAAGCATTTGCGCAAAGTAATGATTTAAAAGCACATATACGCCGTCATACGGGTGAACGGTTTCGTTGTGACGTTTGCGGGGCAGCGTTCCTGCAGCGCTACGGATTAAAGGCTCATGTTAAAGCGGCACACGGCATAATAATGACTTCGTTCACGGGACGTTTGCAGAAAGTGCAATTGCCTGCTGAATTGGCGCAACAAATTCTAGAATCGCCATCacaacaacaacaacaacaacaacaaGCGAACGTCGTACAAACCACCCCATCACCAACTTCGATGCAAACTTCATGTGCTGCTACTGCTGTGTCACAGCAGTACAGTCTAAACCCAATACTTATGCAGACGAATTCCTTAATCGAAGCCAACACCACGTTAGTCTTATCAGCCACTCAGATGTCACTGTAA
Protein Sequence: MDIKVQPNHNIICRICLQENINLYPIEDQVQVLEDRIATLAEIITECTKYPVLDSDQLPTHICNVCKEAARTAYCFKRQTEKAYCRLKAYYDKTWTPKDEKRISKVPSTREQFTQTEHKNCHQCESCPRKFFKGRELREHRMQEHSNDNGRKCRVCGEKFIHLGQLKVHLSTEHPNEGIHCDFKCSTCSKVFSRKDHLKRHLRCVHKYELEEDKINNRVQLTLDEPEIEFEKQVNPTNNTAAITATTLIGVDTDTSLNNHSSHWLDYEDEEEALPQVSDEQHASMAAVNPFSSDDDEENVYQIKKCDSLSSGEQEDIKEFAEYVVQPEISIKVENTEDSFNFNEFVKEIDTPREKRLVTTIASLTDLKREKPLSEDEVQEENKQHLGDENNDRDCGPISDTENMGEENPNNDNKVLKRTKNVRAFKTMKKEMKETEKNIRKNNNFVSNVKGHTTRRRYGASKNEENRCLQCNRTFSRYNHLLRHMLTHSDEKPHVCCYCGKRFSRSDHLQKHIASLHTEKQFKCDQCACAYGRKDHLQRHKETRHGNNPPPPKLFECDMCEKKFTTKAYLMKHKQLHGARLYVCKHCPETFNDKDLLKEHQKKMHTQPRNFLCSICGDSFQRNEYLKIHMRRHTGEKPYKCRFCEKGFPRSTDLKMHERYHIGIKPNLCNLCGKGFHRPYNLTIHMRTHTGEKPYKCTQCPQAFAQSNDLKAHIRRHTGERFRCDVCGAAFLQRYGLKAHVKAAHGIIMTSFTGRLQKVQLPAELAQQILESPSQQQQQQQQANVVQTTPSPTSMQTSCAATAVSQQYSLNPILMQTNSLIEANTTLVLSATQMSL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00750635;
90% Identity: iTF_00750635;
80% Identity: -