Basic Information

Gene Symbol
NCOR1
Assembly
GCA_000688735.1
Location
Scaffold110:391359-396012[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 6.2e-08 8.1e-05 22.8 0.0 3 43 639 679 638 681 0.97

Sequence Information

Coding Sequence
ATGCCTGAAGTCCGGGAGGCCCCGCAACGTTTTATATTGCAAAGTGCTTACAGCATTGGGCCAGGTGCGCAATATCGGGAAAGTCCATACACAAGGATACCTCCAATGCCGCCAGTGCAAGATTATCATCGGGTGGCTGCTGCTGCATTGGCAGCTGCAAATAGTACACCAGGAAGCgggggggTGGTTCAAATGCCACCAACTTCTAATGTTAACATCAGTGCTCCACATGGCATTGAAGCGTTGCATTTTGCACATCCGTCTCCCGGCCACCAGGCATCGTCATCCGGAGCAACACAATTGCTTAACAACGCGCCAAGCGGAGGAGCTGCTGTGTCGAATGCTAATTCGCCGCATAATACATCCAACGTCTCGCCTGCTGGAAATAGTAATTCTTGTGTTACAAGCAGTATAATGACAGGTGGAGGTAAACGCATTTTGCTCAATACAACGCATCGCCAACAATCCCCGTATTCCAATGAGTATTTAAAAAACGTTGCTGTGCCGGCAACAGGTACTGTCTCAGTGAATCGCCATGGTCAGACTCAACCTCCACCTGATCCGGGTGGACAACCACCTTATaaaaaaaTGCGGCTGAGCGATGCGAATAACTCCGCAACAAACAACCTGCCACCACATCAAGTAACAAATGTCCAATCTTCTACACCTCAGCAGCAGCAGCAACGGCAACCATCACCAGTTACCGCGCAGACTCCCAATGTGGTGCGTACGTCCGGTCATGGACACGGACAGATTTTGCCGCCTCATACGCATTTATCGGCATTGCCGCCGTCCCATATCCCTCAGCATCAGCAACACGTGCCACCACCACCTCAATCGGTGACAATGCAGCAACTTAAAGTTGAAACACAATCTCTGCATATGCCAGTGGTAGTCACACCACCTGTGAATCGTGTAGCTGCTTCAGCTCCGATTAGCAGTGTTATTAACGTAGCTTCGGCCACCACCGCTACAACAAACTCTCCCTCAATATCAGTTTCAGTGACAACGACCATTAATTCAACATCTTCTTCAACAGAGGCATATCACCCACAGGTTGAAGCTATTTCGCCTACGTTGCCAATTGATAGTGCGGAGGAACGTGGCCGCACTGCAAAAGAAGATCTATTAATGCAAATTCAAAAAGTAGATACTGAAATAACCAGCGCTGATAACGCTTTGGATGCTTTGCGAACAAAGGAAAAGAATTTGATGGATGtggcagcggctgcaaagcagcagaaggaaatggcagcggctgcgaagaagcaggccgaaaCTGAGGCAGAAACCGATGCCCAAAATTTTTGGCGATCGCAGACATTGGCTCAAAAAATCTATTTGGCGAATCAGAAAACGGCGGCCGCTCAACATTCCATACTCGACAATTGTGGAGAACGCTACTTACTTCCGCTGTACAATCAGCCTTTAGATGTAGACCACCTGACGATTGTGATACAACGTCATCAGACCATCATCAAAATGCCTCTTTTAGATCATTTACGCAAAATCAAGAACGAGCGTTGGATTCATCATACAAAGTTGGTGGAAACATATGCTCAGTTGTCGACTGAGTGGCAGAAACGTGTCGATAAGGCCGAAGGCAGCGCAAAGCGTAAGACACGCGAATCTAAAAACCGCGAGTTTTTTGAGAAAGTTTTTACCGAACTGCGCAAACAACGCGAGGATAAGGAGCGTTTTAATCGGGTTGGATCACGTATCAAATCTGAAGCAGATTATGAGGAGATTATGGACGGCTTGCAAGAACAAGCTATGGAAGTAAGGAAGATGCGTTCCTATGCTATAATACCTCCGCTTATGTTCAATACTTATCAAAGGCGATGTCTCTACCACAATGAAAATGGTGCAGTCAAGGACATGGTAGCTGTACATAAAGAACGTGCTGTACTCAATGTGTGGACAGCGGGAGAAAAGGAAATTTTTAAAGAAAAATTTCTGCAACATCCTAAAAATTTTGGTGCGATAGCGGCTAGTTTGGACCGCAAATCGGCTCAAGACTGCGTGCGCTACTACTACCTCAGCAAAAAGACAGAAAATTATAAGCAGTTACTTAGAAAATCACGGCAGAGAACTAGAGCTTCTAAAACGCTCCAAAAGACGCAGCAACAACCAACACAGTGTATTATTGATTCCCTAACTACGGGTGTAACAACCCGATTGCAACGTGAACAGCAACAAAAGACAGGAGGCCGTTCTGCGGCAGCAGAACGTGAACGCGAAAGGGCGGAGCGAGCGGCAGAGCGAGAGAAAACTGTAGAAAAGACAGTTACAGAAACAACCAAGGCAGTGACAACAACCACAATTAAAACCATAAAACTAGAAGCAGTAAGTGTAACAACGGTGACCGCTGCAACCGCAGTAAATACAAATGTTGAAACTCCTGCGGCTATATCGGCGGACGATTTATTCGTTGCAGCAGCAGATACATCCAAGGTACCGAATGGAGCTAAAAATATTTCGACGCCAAATTCTTCTAACATTACTACCACCACTTGTATGTCAGCTGACAAAAGTCAAGCTGAAAAGCTTGCAACAGCGATAGAATCACATAATAGAACAAACTTAGCTACAGAACAAGAAAATAATACAAAAGTGAACTCACCAGAATCTACGAGCAATGGAAGCAACAAGGCAAAATTCGAAAATAAAGTGTCTGATAACCATGATAACAAGAAATCGATGAATGCGTTGAGTGTGTCTCCTGAAAAATCAACAGAGAAAATATCTGTGACTTCTTCTGGTGCCGCTACGTCAGTTAATTCTAACACTGTTGCATCTCAGCAAACAAATGCTAGTGTAGACAGCGCGTTATTATCTTCATCTGCTTCTCTAATATCTCAGATGCCAACAACGTCTATGGCCTCTTTGAATAATATAGTTCATCCGTCGTCATCAATGCCGAATGGCATTAAAACCTCATACGCAGGCACCATTCCTATTCAAATAGGAAGTGCTGTTGCTACTACAACGGCCTCTCCATCTAAAACTCCATTGATAAACGCTGCATCCGATGAGATTAAAAGGGAGACTTCCAATATTGGGAACGAAAACAAAGAAACGAACATTAATGCTGAATCTGTTGTAGCTGAAGATACAAATAATAAACTAAGCGTTGTAAGTACGCCCACTACCTCAACAAGTGCTGGTAACTTTTTGGGACAAAAACTGAAAGCTGCTCAAGTGGAAAGTGTCAGCGATCCAGGAAATGATTGCAACTCAGATGTTAGAGCGCCCTTAATGTGTCGTAACACCTTAGAAATGTACTCGTTTTATGAAGCATTAACCTAG
Protein Sequence
MPEVREAPQRFILQSAYSIGPGAQYRESPYTRIPPMPPVQDYHRVAAAALAAANSTPGSGGVVQMPPTSNVNISAPHGIEALHFAHPSPGHQASSSGATQLLNNAPSGGAAVSNANSPHNTSNVSPAGNSNSCVTSSIMTGGGKRILLNTTHRQQSPYSNEYLKNVAVPATGTVSVNRHGQTQPPPDPGGQPPYKKMRLSDANNSATNNLPPHQVTNVQSSTPQQQQQRQPSPVTAQTPNVVRTSGHGHGQILPPHTHLSALPPSHIPQHQQHVPPPPQSVTMQQLKVETQSLHMPVVVTPPVNRVAASAPISSVINVASATTATTNSPSISVSVTTTINSTSSSTEAYHPQVEAISPTLPIDSAEERGRTAKEDLLMQIQKVDTEITSADNALDALRTKEKNLMDVAAAAKQQKEMAAAAKKQAETEAETDAQNFWRSQTLAQKIYLANQKTAAAQHSILDNCGERYLLPLYNQPLDVDHLTIVIQRHQTIIKMPLLDHLRKIKNERWIHHTKLVETYAQLSTEWQKRVDKAEGSAKRKTRESKNREFFEKVFTELRKQREDKERFNRVGSRIKSEADYEEIMDGLQEQAMEVRKMRSYAIIPPLMFNTYQRRCLYHNENGAVKDMVAVHKERAVLNVWTAGEKEIFKEKFLQHPKNFGAIAASLDRKSAQDCVRYYYLSKKTENYKQLLRKSRQRTRASKTLQKTQQQPTQCIIDSLTTGVTTRLQREQQQKTGGRSAAAERERERAERAAEREKTVEKTVTETTKAVTTTTIKTIKLEAVSVTTVTAATAVNTNVETPAAISADDLFVAAADTSKVPNGAKNISTPNSSNITTTTCMSADKSQAEKLATAIESHNRTNLATEQENNTKVNSPESTSNGSNKAKFENKVSDNHDNKKSMNALSVSPEKSTEKISVTSSGAATSVNSNTVASQQTNASVDSALLSSSASLISQMPTTSMASLNNIVHPSSSMPNGIKTSYAGTIPIQIGSAVATTTASPSKTPLINAASDEIKRETSNIGNENKETNINAESVVAEDTNNKLSVVSTPTTSTSAGNFLGQKLKAAQVESVSDPGNDCNSDVRAPLMCRNTLEMYSFYEALT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00747408;
90% Identity
iTF_00750402;
80% Identity
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