Basic Information

Insect: Glossina austeni
Gene Symbol: lola
Assembly: GCA_000688735.1
Location: Scaffold277:356406-364552[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 1.9e-09 4.6e-06 26.3 0.0 4 45 474 515 471 515 0.88

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	1.9e-09	4.6e-06	26.3	0.0	4	45	474	515	471	515	0.88

Sequence Information

Coding Sequence: ATGTTATCATCAATCGATCCTCATAGACCGAACGAAGAAAAGAAAACATTATCAAATGATTTAATGCCTATGTGCTATGAAAGACCCGACTACGCATTTATGAACATAACGCTTCATTGGGAACGTGTTAAGCTGGCTCTTAAATTTCGTAAATATATCGCTCGTTACGCCGGCTATACGAATTTTGCAACACCGGTCTTGCCACAGCCACAAGATCAGAGAGGCATTCATCAATTGTCTAGTTATACAATGGAGGGCCCGCCACCCGGACCTCCTTTGGGCGAACCGCAAACTTATTGTCTGCGTTGGAATCTGCACCAATCGAATTTGGTAGACATACTAGATGTCCTCTACAAAAGAGAGAATTATGTCGACTGCACGATAATTGTTGATGATAATGAAAAATTTAAAGCTCATCGTGTCGTACTGGCGGCCAATTCACCCTATTTTCATAGTATACTGCAGGATGTGCCAGGCGAGCATTGTAGCATAATATTTCCCGGAGTGAAAAAATATGAAATGGAAGCCTTACTTGAGTATATGTATACGGGTGAGGTGGATGTAACGCAAAGCCTAATACCAAGAATAATGCGTATTGCCGAAGAACTGAAGGTGAAGGGACTCTTCGATATGGCTGATCTTAAAGAGAAATTTAGTAAGGCAAGCGAAGAATGCAATGAAAGGGCAGTTGATCGTTGCACACGACCAATAAGTCCGGATGTCCTATACCGGTCCCCGGCTTCAACATCATCCAATTGTGCTCAAATTCCTCGAATAACAAAAGATAGCGATAGCTTGGATCATCACGAGATGTCATTAATATCTACCTCTTCGAATATTTCACCGAGCAGTACGCAAAACTTTGGTTTAATTGCGTCAACTCCGGGTGGTCAATGGACTATGTCGCCTTCATCGGCCGCAGCTGCCATGATCAATTCGGTATACGATGCAGGCAACGATATAAATTCGTTAAAACATGCGGCGGAGATGTCCGCCTTCCCCCATATAGTAAATGGCGAAGACACTCCCATATTGCGTAATGTTTTAGGCCACACCAATCCAGTCGATTCATCGCAGTCCTTGCCTTTAGTTCTGCCTAGCACCTCGGCCTCGGCGGCAGCAACAGCGGCGTCAACGAAAGGAGATGTGAGCTCATCAGCGCATATGGTAGGTCAAAGTAGTCATGGTTTTAGTTTAAACGGTTCTGATTACAGCGGGAATCGGCAACCTGATCGTCATTCGCAGCTTCCGCAGCAACAACATGATGAACAGCATTCGCCTTTGACCGATCGCTCCTTTGACGATGAGGGAACGTTCGCAAATAGAAGCAGTAGCAGTAGTTACGATAGCAATGTAAACAGCGCAGCGACAGGAAATCAGAAACCGGAATGGAAGCGCTACAAACAATATACTCGCAATGACATTATGTCGGCTATTCAGTGTGTGAAGCAGGGTATGACCGCTTTGCAAGCGTCGAAAAAATTTGGCGTACCCTCAAGAACACTGTACGATAAAGTaaaaaaaCTAGGCATAACCACAGGTCGTCCAATCAATCGTTCTTTGAAGCGGAGTCCAACCAATGTGGAATCTTCGGCAGCTTTCCCCTATGCTCATACTTATGGCCAAGCGTCGACGTCGGTAGCAATAGCAGCCGCAGCCGCTATGCATGACGTTAATCGCGAAAACAGTGAGCTTAAAGAGCAGTTACAGCGCCCCAGTGAACCCCACCATTTGCCACAAGCCATGGCTCATCCAACTCTATTGGATCGCGCCTTCTTACAGCAGGCATTAGAAAGCAGGGGCGGAGGCGATATAGCCGGCCGAGAAGCTTTACATGCAATGGCCTTAGCAGCAGTAGCCCAAGCCGCTGCCAATCATATATCCACAAATCCAGGAGCCAACGGCAATGCCGCTCGTTCTCCTAGTCCAGCCACATTTCCTTTAATCAAATACTGTAACGCAATGCATATAGACGAACCTGAAGGCTTAGAACGTAGCGGCGGTGCCAACAGTCTTGAAAGGCATCATCAACAAATCATGGAAATTGACGACGATAATCACGCACAAGATCTAACAATCAATCGCAAAACGATTAAGTCGCCTTTAACCGTAGAACAAAGAGAACAACGGCCACTGTCGACTAACATATTGCCAACAATGTCGCAACCTCGCAGTTCGCAAGAGGCGGAAAGGACTGTCATAATAAACTCTAAGTTGCCATTAAATCTTAGCGATGAATTTATTCCTGAGTCCGCAATGAAGAGGGAAGTTGTCGATGATGTTCGAGGTGATTGA
Protein Sequence: MLSSIDPHRPNEEKKTLSNDLMPMCYERPDYAFMNITLHWERVKLALKFRKYIARYAGYTNFATPVLPQPQDQRGIHQLSSYTMEGPPPGPPLGEPQTYCLRWNLHQSNLVDILDVLYKRENYVDCTIIVDDNEKFKAHRVVLAANSPYFHSILQDVPGEHCSIIFPGVKKYEMEALLEYMYTGEVDVTQSLIPRIMRIAEELKVKGLFDMADLKEKFSKASEECNERAVDRCTRPISPDVLYRSPASTSSNCAQIPRITKDSDSLDHHEMSLISTSSNISPSSTQNFGLIASTPGGQWTMSPSSAAAAMINSVYDAGNDINSLKHAAEMSAFPHIVNGEDTPILRNVLGHTNPVDSSQSLPLVLPSTSASAAATAASTKGDVSSSAHMVGQSSHGFSLNGSDYSGNRQPDRHSQLPQQQHDEQHSPLTDRSFDDEGTFANRSSSSSYDSNVNSAATGNQKPEWKRYKQYTRNDIMSAIQCVKQGMTALQASKKFGVPSRTLYDKVKKLGITTGRPINRSLKRSPTNVESSAAFPYAHTYGQASTSVAIAAAAAMHDVNRENSELKEQLQRPSEPHHLPQAMAHPTLLDRAFLQQALESRGGGDIAGREALHAMALAAVAQAAANHISTNPGANGNAARSPSPATFPLIKYCNAMHIDEPEGLERSGGANSLERHHQQIMEIDDDNHAQDLTINRKTIKSPLTVEQREQRPLSTNILPTMSQPRSSQEAERTVIINSKLPLNLSDEFIPESAMKREVVDDVRGD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00748147;
90% Identity: iTF_00748147;
80% Identity: iTF_00746828;