Gaus009595.1
Basic Information
- Insect
- Glossina austeni
- Gene Symbol
- lov
- Assembly
- GCA_000688735.1
- Location
- Scaffold84:630583-634364[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.12 3e+02 1.4 0.0 32 44 2 15 1 16 0.92 2 3 5.3e-19 1.3e-15 56.9 0.0 1 44 91 134 91 135 0.96 3 3 1.5 3.6e+03 -2.1 0.2 2 11 280 289 279 290 0.84
Sequence Information
- Coding Sequence
- ATGACTTTGTATGGAAAACATGTCGAAGAAAAACCAACCGTCTCTAGTGATAAGCATCTTTTCGTTTTTAGTTTGCCTGTAAGCAATTTTCATGTGCGCCAACCGACGAAACATGCTAGACGTGATTTAAGATTTGCCACATTTAGTTTCGTTGTCGTTTGTCCCTCCTGTACTATCGGCAAAGTACATTTAGCTACTTGTGCTTGTTTGTTAGTGCCTAGACCAAAAGGCCAGCATTCAGCGCCTAGGGGCGGTCCACCGCGTTCCTGGACTAATGCTGAGCTAACGGAAGCTTTACAGCACGTATGGAATAAGAAAATGACAACTTCTCAGGCTTCGCGCATCTTCGGCATACCTTACAATTCTTTGCTGATGTACGTGCGCGGCAAATATGGAAAAAGTCTAAAGCTTGAGCAGCTACGCAAAGACTGTATTAGTGGTCCACCGCTGGAGTTACTACAAATGGGTGCAAGTGGAGGTAAAAATTCTGGGGAAACACGAGAACAGCGGGAGGCTCGCAAAGAAGCTCAACGTAATGCTGCCGCTAATGCAGCGGCTGAATTAGATTTAGCAGCCGGTTTAGCGAGTGGGCAAGCCGGCGGTCCCCATAACGCTAACTCTGAAGCTGATTTACTGGGCGGCCCTAATGCTTTATTCAATCCTTTTAATCCTCAAGGATTTTACCCCGATTTTCCGGGAGGTTTTCCTGGCTTACCGTTAAGCATGTTGAATCTCTTACCACCCGCAGACAGATCACAACACAGTGGCGTAATGCATCACGGCCTAGGAATGGATGAAGATTGCAAATCCGATCGCTCTAAGCAATCGTCATCTTTGGATGACGAATTTGCGGCGGCAGCTCAATCTTTAGCAATGCAACGACCACCTGAAGAAAGACGTCACGGCGATCTAATGGCCAATAATGCGACAAATAATAATTCAAATTCTGCTTCCAATTCACAGGCTAATGGCGGTGGTGGTGCGGGGGGACAGCAAGATTGA
- Protein Sequence
- MTLYGKHVEEKPTVSSDKHLFVFSLPVSNFHVRQPTKHARRDLRFATFSFVVVCPSCTIGKVHLATCACLLVPRPKGQHSAPRGGPPRSWTNAELTEALQHVWNKKMTTSQASRIFGIPYNSLLMYVRGKYGKSLKLEQLRKDCISGPPLELLQMGASGGKNSGETREQREARKEAQRNAAANAAAELDLAAGLASGQAGGPHNANSEADLLGGPNALFNPFNPQGFYPDFPGGFPGLPLSMLNLLPPADRSQHSGVMHHGLGMDEDCKSDRSKQSSSLDDEFAAAAQSLAMQRPPEERRHGDLMANNATNNNSNSASNSQANGGGGAGGQQD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -