Basic Information

Gene Symbol
ct
Assembly
GCA_000688735.1
Location
Scaffold160:216477-239684[+]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 1.6e-27 1.6e-23 82.6 0.0 3 72 592 662 590 667 0.94
2 3 4.9e-32 4.7e-28 97.1 0.0 3 77 1077 1152 1075 1154 0.96
3 3 5e-31 4.8e-27 93.9 0.0 3 77 1324 1399 1322 1401 0.96

Sequence Information

Coding Sequence
ATGTACTGCAAACATCGTACAGTTGCTTTTAAGAAATTGCACGCATTACGAATTGAGGCCCTTTTCGATGAAGTTAAGCGGTTAAGAGCAATAGAACAAACGCATCTGTTACAAATCCGCAGACTTGAAGAGCATTTAGAAGCTAAGCGTCAGCATATAATGCGGTTGGAGAGCCATTTGGATAAACAAGAGAAACTTTATCCGCTAATCGAAGTGAGTTCGCCTTCTGAGTCCGATTCGCAGATAATGCAAATGAAAAATGTGTCAAATCAAAAGGAAACGAAAACGGATGATCCCAAAGAAATTTTTCATACGGaaaaaaaTGTAGAAACTCTCGATGACGATCAAAACGAGGACGACGAATGCACCAAATTGACGGAGAATATCAGCGAAATCGATATCAAAAAGGAAACACAGAGTCCATTAAGCTTAGACGCCATAAGCCAACAGAACGCGATTGCTGCCGCGGCCGCTGCAGCTGCAGCCTGCAATAATGATCCGAATAAATTCCAAGAATTATTAATGGAACGAACCAAAGCATTAGTGGCTGCCGAGACGTTAAAGAGTTCTGACGAAATCGCAACCGATCGTATTGTTCAAGATATAACTAAGCCCGGCGACGACGTTGAGCAACATGTAGAAGCGACTAAAGTACCGAAAATCGAAGTAGATCTCGACGAAAACGCGAAAAATATTGAAAGCGCCGGAAGCTTAACCAAACAGTTAGAATCTTTTACAAATGTGCCAAGATCGATGAAAGAAACGTGTTTATTAAAATCGGACGTTGAGAAGCCGTCTTCGACAGAGAATGACGAGCTTTCCTCAGCCAATTTTAAAGAGAACGTTGAACGTTTCGGTTCATTGCTAGGAGAAGAATTGGTTAATTCTTATTGGAGAAGAAGTTTCGATATAACCCTAAATGCCAACGCGTCGAAATCCTTATATACAAATGTTGCCAATATTACtcagcatcagcatcagcatcagcatcagcatcagcatcagcatcagaatcaacatcatcatcaacctcagcatcaacaacaacagaatatactgttgcaacaagccgtccatcagcataatcaactgcagcaacaacagcatcgtagtcatcatcatcagcatcaacaacaacagcaacagcaattgctaacacatcaccaattgcaacagcaacagcaacaacaacaacaacaacaccaacaacaacaacagcagcagcaacaacagccgcagcaaggacaTTCGTCCACTGCACTGCTTAGTCAATTAGTTAATTCCACTTTTGCACAACAAACCAGTACTCAAACGAATTCTTCCATTCTTCGTTCAACAGATACTTTACAGCATATGCCGCCAAACCATCAATTGCCATCTCACATAACCGATCATCATGAGAAAATAGGTCTCAATCAGCAAGACTCAATGTCAGCATCCAGCGCCAGTACGCCAAATCTGCAAGATCAACGTTCTAACGACGAGCACGGCTTATCGCTGAACGGATCTCATAAGTCGCTCGATGATAACAATAGCAATCTATGCGCCACACCTACAAATCCTATAGGACCTCATCATCTTCCACACAGTTTCCTGCCCGGTCTACCATTCCAATTTCAAGATCGAGGTCACTTTCGTTTCGCCGATGAACTGCAACTGCCGCCCGGTACATCAATGGCTGGCCGTTTAGGAGAATCCCTAATACCGAAAGGCGATCCGATGGAAGCGAAATTACAAGAAATGCTTCGCTACAATATGGATAAATACGCAAATCAAAACCTCGACACTATGCACATCTCACGACGTGTCAGGGAGCTGCTATCAGTTCACAACATCGGTCAACGCATATTTGCCAAATACATCTTAGGCTTATCGCAGGGTACCGTATCCGAGTTGCTGTCAAAACCCAAGCCATGGGAAAAGCTCACCGAGAAGGGACGTGACAGTTATCGCAAAATGCATGCCTGGTCGTGCGATGACAATGCCGTTATGCTACTCAAATCGTTGATACCCAAGAAAGAGTCTTGTGACGGCGCAACGCCGTCAACCATCGCTGAGCTCTCTCCATCGCCGCATCACgaaaaagaaaacaaagacgaagacgaagacgaagacgaagacgaagacgaagacgaagacgaagacgaagacgaagacgaagacggagacggagacggagacgaaaaagaagaggaaaTCATCTCATCATCAGCACCCATAAATACTTATTCTGGCTTACCGCCGTACGGTGGCCGTGACGATAGTATGTCTGATGAGCGTATAGCTCATATATTAAATGAAGCTTCGTCGATGATGAAAAGTTCGGTATCGTCAGGTCTGCAGCATCAATTAAAAGATGAACAACAAAGACGCGTTCATGAAGATTCGCATAGCAATGAGGATTCCAAGTCACCACTTCAACCTTGCCCTTCGCCCTTCTTTAAAGAGCAAATCAAACAAACACAAGACTCATGTATTCAAAGTCAAAGCAACCCTCACATACGTCAAGAGGATGTGAATCCTGAAAAAATGGCTCGCCTCTATCAAGAGATAATGACTCGTGCGCCCCGAGAAGCTTTTCCCAGTGGTGGCTTACCCGCTGCCGCCGGTATGCCAGGTAATACGTTTAGTGGCTTAGCAGCTGATGAGAGTATGCGGTTGGCTTTCGAACGGGAAATGGTTAAATTACAGCAACAAGCACAACCCCCGAATTTTCCTAACTTTTCTAGCTTAATGGCATTACAACAACAAATGCTGAATGGAGCGCAAGATCTGAGCTTAGGCAAAGAAACAGCAGTTAAAGAGCTTAAAACGAATGGGCAACGCAACTCTTTTGCTTCCTCGCAAACTTCCTTAGAAAATTCTGGTACAGTCGCCCAACAAAATACAACAAATGCCAAAGAAAGCTCCACTCCGAGTGTGGAACGATTGTATCCCGGAATGTGCAAGTCCGATACAGGCAATAATACTCCTGCCTCACAGCCTTCCGCCAATACACCAGCTCTGAATGCAAATTCAGCCGCCCCAAGTCCACTTAGCAACACCATTCTCCCGCCTGCAATGACATCGAATGACGATTTTTCTACTACTGCCAGTCCTCTACAACGTATGGCGTCCATAACCAACTCTTTAATCACACAACCGCCCGTACCACCGCATCATCCACAGCCTCAACGTCCTACAAAAGCCGTGCTTCCACCCATAACGCAGCAACAATTTGATATGTTCAACAATCTTAATACCGAAGACATTGTTCGTCGTGTCAAAGAGGCTTTATCGCAATATTCGATTTCTCAACGTTTATTTGGAGAATCAGTGTTAGGCCTATCTCAGGGATCTGTTTCTGACCTCTTGGCTCGCCCTAAACCGTGGCATATGCTTACGCAAAAAGGTAGAGAACCCTTTATACGTATGAAAATGTTTCTCGAGGATGAGAATGCAGTTCACAAGTTAGTTGCCAGTCAATATAAAATTGCACCCGAGAAACTTATGCGCACGGGTAACTACAGTGGAACACCTCAGATTCCCCAAGGTTTAGCTAATAAAATGCAGGGAACGCTACCTATGCAAAAAATGATTAACGATTTGAAACTACAAGAACCTACCCAGGCTCAACAGATCATGCAACAAATGCAAGCGGCTGCTGTTATGTCTGCTGCAATGCAACAACAACATCAAGCTCAACAAAGTcagcatcaggctgtagctcaagccgcacaagctgtagcccaagcagctcaaCATCACCAAAGTATGCTGTTAACGTCGCCAGGCCTGCCACCGCAACATGCTATTCCTTTACCAGCTGCCACCACAAATCCTAATTCTAGTGTTCCAACGACAGCATCAGGGCCCAGCGGCGAAAAGAAACCGATGATAATGCCCATACACTCACCACACACGCCAAATGCCATGCGAAATTTACATCAGCATATGTCACCAACAGTGTATGAAATGGCTGCGCTCACGCAAGACTTAGATACTCAAGTTATAACGACTAAAATTAAAGAAGCCTTACTAACCAACAATATTGGGCAAAAAATATTCGGAGAGGCGGTTCTAGGCCTTTCTCAGGGCTCCGTATCGGAATTATTGAGCAAACCGAAACCTTGGCATATGCTCTCAATTAAAGGTCGCGAGCCTTTTATACGTATGCAATTATGGCTGTCCGATGCCAATAATGTTGAACGTCTTCAAGTTCTAAAGAACGAAAGACGGGAAGCATCAAAACGCCGACGTTCCACTGGGCCCAATCAACAAGATAACAGTTCAGATACTTCAAGCAATGACACTAACGATTTTTATACTAGTAGCCCAGGTCCAGGCTCAGTTGGTAGCTCAGTTAGTGGCCCCACTCCAAATAAAAAGCAACGGGTTCTCTTCTCTGAAGAACAAAAGGAAGCATTACGTTTAGCTTTCGCTTTAGATCCATATCCAAATGTTGGAACAATTGAATTCCTAGCCAATGAGTTAGGCTTGGCGACACGCACGATTACCAATTGGTTTCACAACCATCGCATGCGTTTAAAGCAACAAGTGCCTCACGGCCCGCCGGGTGCCGAAAATCCGATACCTAGTCGAGAAAATACAAATTCAACACCATTTGATCCCGTCCAGTTTCGCATACTACTTCAGCAACGGCTACTTGAATTGCATAAGGAGCGCATGGGTCTAACTGGCACTAATCCTTTGCCTTACCCGCCCTATTTTGCAGCAGCAGCACTACTCAGTCGCAGCCTTGCCGGTATACCTAACGCCACGCCAGCTGTCCCAGGTATAGCCGGCGAAAGTGAAATTCATGCTCTAAATCAAGCTTTCAAAGAGCAAATGTCCGGTTTAGATCTAAGCATGAGTTCACTCAAACGAGAGCGAACCGATGAATTTGAGGACGATCTGGAAGAAGGGCATTTAAGCGAAAACGACAATGACTCCCTAGACGAGGATGATAAATCGGGCGACTATAAAGACACACCTCGTTCAAGCATTAGTAGTAGTGATCGATTCTTTGGCGCCAATATGCGCTCTAACAAACGAAAGCGTGCAGCGCCTCAATGGGTTAATCCAGCAGCCGTTGGACTTAATGCTACACCTACCACAGAGAGCAGCGATCGACTTATTAACGGGGTATGCATAATGCAAAGCAATCAACGCACCGAACCTATTTCAGATCAAAACGAAGAGGAAATTCATAAAACTCAAACGTCAGAAGACCAAGAAATCGTTCATTCCGATATAATGGAACCTGAAGTAGTGATAAAACAGGAGAAAGCGGATTGCGAAAGTGACTCGGAGCAAAACTCTGCCTTAACGAAAAGTAAAGAAGACAAAATCAAAGTAATGCAAGACGAGAAACTACGAATGGTACGTGTAAGTCGCTTAAGCAACGAAGAGGAACAGATCAGCACTGCGTCAACCTGGAATTATTAA
Protein Sequence
MYCKHRTVAFKKLHALRIEALFDEVKRLRAIEQTHLLQIRRLEEHLEAKRQHIMRLESHLDKQEKLYPLIEVSSPSESDSQIMQMKNVSNQKETKTDDPKEIFHTEKNVETLDDDQNEDDECTKLTENISEIDIKKETQSPLSLDAISQQNAIAAAAAAAAACNNDPNKFQELLMERTKALVAAETLKSSDEIATDRIVQDITKPGDDVEQHVEATKVPKIEVDLDENAKNIESAGSLTKQLESFTNVPRSMKETCLLKSDVEKPSSTENDELSSANFKENVERFGSLLGEELVNSYWRRSFDITLNANASKSLYTNVANITQHQHQHQHQHQHQHQNQHHHQPQHQQQQNILLQQAVHQHNQLQQQQHRSHHHQHQQQQQQQLLTHHQLQQQQQQQQQQHQQQQQQQQQQPQQGHSSTALLSQLVNSTFAQQTSTQTNSSILRSTDTLQHMPPNHQLPSHITDHHEKIGLNQQDSMSASSASTPNLQDQRSNDEHGLSLNGSHKSLDDNNSNLCATPTNPIGPHHLPHSFLPGLPFQFQDRGHFRFADELQLPPGTSMAGRLGESLIPKGDPMEAKLQEMLRYNMDKYANQNLDTMHISRRVRELLSVHNIGQRIFAKYILGLSQGTVSELLSKPKPWEKLTEKGRDSYRKMHAWSCDDNAVMLLKSLIPKKESCDGATPSTIAELSPSPHHEKENKDEDEDEDEDEDEDEDEDEDEDEDGDGDGDEKEEEIISSSAPINTYSGLPPYGGRDDSMSDERIAHILNEASSMMKSSVSSGLQHQLKDEQQRRVHEDSHSNEDSKSPLQPCPSPFFKEQIKQTQDSCIQSQSNPHIRQEDVNPEKMARLYQEIMTRAPREAFPSGGLPAAAGMPGNTFSGLAADESMRLAFEREMVKLQQQAQPPNFPNFSSLMALQQQMLNGAQDLSLGKETAVKELKTNGQRNSFASSQTSLENSGTVAQQNTTNAKESSTPSVERLYPGMCKSDTGNNTPASQPSANTPALNANSAAPSPLSNTILPPAMTSNDDFSTTASPLQRMASITNSLITQPPVPPHHPQPQRPTKAVLPPITQQQFDMFNNLNTEDIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDENAVHKLVASQYKIAPEKLMRTGNYSGTPQIPQGLANKMQGTLPMQKMINDLKLQEPTQAQQIMQQMQAAAVMSAAMQQQHQAQQSQHQAVAQAAQAVAQAAQHHQSMLLTSPGLPPQHAIPLPAATTNPNSSVPTTASGPSGEKKPMIMPIHSPHTPNAMRNLHQHMSPTVYEMAALTQDLDTQVITTKIKEALLTNNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDANNVERLQVLKNERREASKRRRSTGPNQQDNSSDTSSNDTNDFYTSSPGPGSVGSSVSGPTPNKKQRVLFSEEQKEALRLAFALDPYPNVGTIEFLANELGLATRTITNWFHNHRMRLKQQVPHGPPGAENPIPSRENTNSTPFDPVQFRILLQQRLLELHKERMGLTGTNPLPYPPYFAAAALLSRSLAGIPNATPAVPGIAGESEIHALNQAFKEQMSGLDLSMSSLKRERTDEFEDDLEEGHLSENDNDSLDEDDKSGDYKDTPRSSISSSDRFFGANMRSNKRKRAAPQWVNPAAVGLNATPTTESSDRLINGVCIMQSNQRTEPISDQNEEEIHKTQTSEDQEIVHSDIMEPEVVIKQEKADCESDSEQNSALTKSKEDKIKVMQDEKLRMVRVSRLSNEEEQISTASTWNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00746597;
90% Identity
iTF_00746597;
80% Identity
iTF_00746597;