Basic Information

Gene Symbol
osa
Assembly
GCA_000688735.1
Location
Scaffold223:2037-123957[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 0.48 1.9e+03 -0.5 0.0 12 46 259 291 256 293 0.87
2 2 8e-25 3.1e-21 75.7 0.0 3 89 522 608 520 608 0.91

Sequence Information

Coding Sequence
ATGGGTTCCGGGCCGCCGGGCACGCCTAATTCACAACAAGTAATGCGTCCTACACCTTCCCCGACAGGCTCCTCAGGGTCTCGTTCCATGTCGCCGGCAGTAGCACAAAATCATCCCATTTCTCGTCCCTCGAGCAATCAGTCGAGTAGTGGTCCCATGCAGCAACCAGGCGGTGGGCCACCGCCAACATCTTCCCAGGCGACATCACAACAGCAATCTCAGAATTCTAATTCAGTATCGAGCAATTCACCGCAACAAGGTCCGCCAGGAGGTGTTGCTGGTGGCCCGCCTGGTTCTCAACAACCGCCGCAACCCCCAAATCAAAATGTAAGTAACTTGTCATCTCAACCTCTGCCCCAAGGAACCGGCGGCAGCAATATTTATCCTTTGCCACCCCATATGCATGGCAGTTATAAAATGGGAGGCCAGAATCCTGGCCCACAAACGTTGCTCTCAGCCTATCCGCCACCACCTTCTCAACAGGCTCAACAATACTCTCAAGGGAGCTACCCGCCACGACCTCAGTATCCGCCAGGTAGCTACGCACCAACACCTCCAAATTCTAGCCAACCCTCGTCTGTCAATAGCATGCCACCTGGTAGCGGGCCCCAACAATATGCCGCTGGGCGGCCCATACTTAATCATGGTGGTGGGTCGCCATATCCAGCTTATCAAAATTGGGTTCCTCCTAGTGGACAAGGAGGAGGTCCAGTTAACGTGGGTTCTGTACCACCAGGTGCGCCGGGAACTCCTGGCGGCGCTCCTATGGGTAATCACATACAAAGTAAGGGTACACCGCCACCACCTCAGAGTGGTGGATCCTCTCGGCCTCTCAACTATTTGAAGCAACATTTGCAACATAAAGGCGGTTATGGCCCGGGAACAGGCCCTCCTCAAGGTTACGGCAATGGTCCGGGTATGCATCCTGGCATGCCGATGGGCCCACCGCACCACATGGGTCCACCCCATGGGCCTACAAATATGGGTCCGCCTACTAGTACACCGCCACAACCGATGATGGGTGGCGCAGTGGGAACTCCGGACGGAAACTCCGGTCCCCCACCGCCGCCAGATCACATTTCGCAAGATAATGGCATAAGTTCTTCGGGCTCCTCAAGTTCAGCTTCAGGACCACCACATCCTGTAACTTCAGTAGTAACCACTGGACCCGATGGAACTCCTATGGACGAAGCCAGCCAGCAAAGTACATTATCGAATGCATCAGCAGCTTCTGGTGAAGATCCTCAATGTACAACCCCGAAGTCGCGCAAAAACGATCCATATGTTCAAAGTCATTTAGCACCACCGAGCACGTCACCAGTAGGTATGGTTGGTACTGGGCCACACGCTGGCCATACTGGTGTCCCTGGTGAAGAATATGAAATGAGTTCACCGCCAAATTGGGCAAGAACTCCGGCCAGCCCCGGTTTCAACAGTCATGTTCCTCAACAAGATGCGTTCCGGACAACTGGAGCCACTGCGACACCTATTTCTGCATCGGCTGCCAACAAAAAATCGGACAGTCTTTGTAAACTATATGAAATGGATGACGCACCTGAACGACGTGTTTGGTTAGATAAGTTACGAGCATTTATGGATGAGCGCCGCACACCGATTACCGCCTGCCCCACGATATCGAAGCAACCACTCGATCTATATAGGTTGTATTTGTATGTTAAAGAGCGAGGCGGATTCGTCGAGGTATGCAAGGTGACAAAAAGTAAAACATGGAAAGATATTGCCGGTCTTTTGGGTATTGGTGCTAGCAGTAGTGCCGCCTACACCTTGCGCAAACATTATACCAAAAATTTGTTGGCTTTTGAATGTCATTATGATCGTGGAGATATCGATCCGTTGCCCATTATACAGCAGGTAGAAGCGGGTACCAAAAAGAAATCAACCAAAGCTGCGTCAGTGCCCTCGCCAGCTGGCTCTTCGAATTCCCAAGATGCATTTCCAGCCCCGGGCACTGCTGCAAACGCTTCAATTGACGGTTATCCACCTTATCCAGGTGGTTATCCTGGCGCTGGCCCACAACCCGACTATGGTGCCGCTGGTCAAATGCCTCGACCACCTTCGCAGAGTAATGCTCAAAGTCCGCATCCAGGTTCTCCCTATCCCGGTCAGCCTGGTGCTTACGGCCAATATGCCTCAGGCGATCAATATAATTCCTCTGGCCAGCCAGGACAATTTGGTCAACAACAAGGACAATTTCCTCCCCAGAATCGCAACATGTATCCTCCCTATGGACCCGAGGGAGAAGCACCTCCAACTGGTTCAAACCAATATGGCCCATATGGTAATCGTCCGTACAGTCAGCCTCCACCTGGTAGTTCGCAAACTTCTACACCACCCGTAGCTCCAAGCAGTGCATCAGGACCAGGTCCAGGTGGGCCAGCGACAGGAGGTAGTCCTTACCCTCCCGGCCAACAAGAATATTACCGACCCCCAGAACAGAGTCCGCAACCAAGGCGACATCCAGATTTCGTTAAAGACTCACAGCCATATCCTGGCTATAGTGCTCGACCACAAATTTATGGTGGTTGGCAAGGCAGCTCTAATCAGTATCGAAGTCAGTATCCTTCAACTCCTTCTCCGCAAACTTGGGGCTCAGCTCCACCGCGAACGGCCGCACCAGCTGGAGGCCCCTTAGGGCCACCTGGCCAGCAAACGCCTACAGCTTCTGGTACGACTCAATGGGATCAGCACCGTTATCCCCCTCAACAGCAACCTCCACCTCCCCAACAGCAGCCACCTTATCAACAACAAAGTCAGCAACAGCCACCACCACCTCAATGGGCACAAGCAATGAGTGCAAGCGGTGCGAATCCGCCGGGTGCGCCTTCAGCTGGAACACCTGGTTCTCCTCTAAGACCACCAGCTACTGGTCAACAACAAAGAATACCAGCAAGCGCAGCTGCTAGCATATCAGGATCACCAGGGCCGCAGCCAGGGCAGCAAGTTTGCCCCCCGAGTACTAGCAATGCTCCAACCGGTTTGCCTTCTAGTAGCTTGGGAAAACCACCGTTCTCTATGCCACCGCCCCAGACCAGCAGTGCAGGTGTTCCAGTTCCAGCAGGGTCAAACGCTATGACCGGAGTGATGAGTGTACCCCAGAAACCGGTGACCCCTGTCGGAGGCTCCGGTGCTGTTGGAGCTCCTCCGCCACCCCCACAAGCTCCTTTCCCACAGTTCGCCAAGAAAGAGATTGTCTTTCCGCCAGATAGCGTTGAAGCCACTAGTCCGGTACTATACAGACGAAAACGATTAACAAAAACTGACGTATGCCCGGTTGATCCTTGGCGAATTTTCATGGCGATGCGGTCTGGTCTATTGACGGAGTGCACTTGGTCTTTAGACGTTTTGAACGTGTTGCTATTTGACGATTCCACCGTTCAGTATTTTGGTTTGAGTCATTTGCCCGGCCTGCTAACACTATTATTAGAACATTTTCAAAAGAATCTCGCCGCAATGTTTAAAGATGAAGGAGACGAGGATAAGTCTTTCGCTGGTCCTAAGAACGAGAAGAAAAGACTTACGAGGTCAAATTATTTGCGTAATGATAAGCGCAATCGAGAAGCTGCTGCTGTTGGAGATGATTTAAAGAACGCTAAAATTGATGGGTCATCTGAAAATGAAGAAACGGATGAAGACGAAGATATCGATCTGGGTCAAGTTCGAGTACCTCCTAATCCTGAAGAACGTGTTGTCCTCTTAGCTCATACCCCCAATTATACAATGATGTCACGTAAAGGATTGCCTGTTAGATTGCAGTCTGCTGAACATGACATATTCGTGATAGATGACTTAAAGCCCTGGGACGCTGAGGGGGGAGAGAAATTTGAAGAAAGCGTTCCAGTAGGTTGCAACGCTTGGACGTATGGCTTTACTGACCCGGACACCAATGCGGGCATTATTGACGTGTTCAAATCAGAAATCATAGACATTCCATTTGCTCGCTATATCAAGACAAAGGGGAAAAGTTGTAACAAATGCCACAAAATTAAAATAGAATCTGATTCTGTTAAATCTAAGCAAGACAGTCAGAATGAATGTGATAGGGACGAGGAAGTTGAGGCCCGTCTACAGCAACACGCTTTTAATAAGAAACGTAGACTTTTCAATAATAGCAATGCGGTTGGTTGCACTAATAACAACAACGGCAATCAACTGATAGGAGAACCTAGTGAAAGCAAGAAATTGAAATTGCAAGCTGCAATGGAGGATGAGGAACAGAAAGTATCGTTAACGCATCTTGAAATCAGCCGGGAAGAAACAGAGGCGGCGTTAGCAACTTCCAATAACACCGACAGTGATTGCCGTGAAATAGACATGGAATTGGAAACAATCAGCAGCTCGAAGGACACAACAAAAGAATTTGATCCTAAGTCGACAGCTCGAGACCCTGCATTGGTACTGCAACGTCGGCGCTCCTCTTCTTCGCTGGAAGATGAGTGTTACACTCGCGATGAATCCAGTCTGTATCTAGTGAATGAAAGCCAAGACGCTCTTGCCAGACGCTGTATTTGCATTTCAAACATATTCCGAAATTTAAGTTTTGTGCCTGGAAACGAAACGATATTAGCGAAATCACCGCGATTTTTAGCTGTGCTTGGCCGCCTACTATTACTCTATCACGAACACTTACCTCGGCCACCAAAGAATCGTAATTATGATCGTGGCTCCGAAGAGGATACTGACTTTTCCGATTCTTGCAGTTCGCTCCAGGGTGAACGAGAATGGTGGTGGGATTATTTGATAAGTATACGAGAGAACATGTTAGTAATTATGGCAAATATAGCGGGTCATTTGGAACTTACACGATACGAAGAACTCATAGCACGTCCATTAGTGGATGGCCTTCTTCACTGGGCTGTTTGCCCAAGTGCTCACGGCCAGGATCCGTTCCCGTCTTGCGGGCCCACTTCATCATTATCACCCCAAAGACTTGCCTTGGAGGCTTTATGCAAATTATGTGTTACTGATAACAATGTTGACTTAGTGATAGCAACTCCTCCTTTCGCAAGGCTTGAAAAATTGTGCGCCGTCCTTACACGACATTTGTGTCGCAATGAAGATCAAGTCTTACGCGAATTCTCAGTAAATCTTTTGCATTATTTGGCAGCAGCAGACAGTGCAATGTCTAGAACGGTAGCGCTTCAGTCGCCATGTATTTCATATTTGGTAGCATTCATAGAACAAGCAGAACAAACTGCATTAGGTGTAGCCAACCAGCATGGCATTAATTATCTACGAGAAAATCCCGATTCGATGGGTACTAGTCTCGATATGTTACGAAGAGCAGCTGGAACTTTGCTGCATTTAGCGAAGCATCCAGATAATCGTTCATTATTTATGCAACAAGAACAACGTCTCTTGGGTTTGGTTATGTCTCATATTCTAGATCAGCAAGTGGCATTGATTATCTCACGGGTACTTTTTCAAGTGTCGAGAGGTCCTGGAACTACTATTAATTCTCTGGAATACCGCATACAACAGAAGCAACAACAAAAATCCGGAAATATTGAAAAGAAAGCTTCAGGTAGAGAATTAATTAGCAAGGAAGGAACAAATGTCGCTGCGAAGACTGAAATGAAAGTGGAACCCTCGGAAACAGTAAATTCAATATCACACAACAGTTGCGATGGTGGTTTAGTCACTACGGACGTGATTAACGGTAATAAAATAATATCAAATTCGTCTTCtagcagtgtgatggtttcagccgacagtgaaaatagtaatagcagttctcaaataacaccagcagctgcatacaatgatgtcagcaacagtagtacaaatagtaatagttgtggtacggcagtcagttctcaaagcaacatgagcaacaatagcagcagtagtagcaatatttgcaatagccaaaacaacaatcttagtaacaattacagtaacgcaacagCGAATTATATACACTCGAACAGTATAGCGACGAGTGAGCATTTGAAAAGTAATATTTTAAGTTCTGTGACTCAAACAAATACTCCTTTAACATCCAACAACAGTAGTAATGTAAATCTTAATAGTAATTCGATTGTCGCTTCTACCGTCGCATCATCACAAGCGCCACCGCCCCCATCACCGTCAACAGCGCCGGCTCAAGCTCCTACTGCCAATACAACAACAACAGCTGCTGTTGCGTAG
Protein Sequence
MGSGPPGTPNSQQVMRPTPSPTGSSGSRSMSPAVAQNHPISRPSSNQSSSGPMQQPGGGPPPTSSQATSQQQSQNSNSVSSNSPQQGPPGGVAGGPPGSQQPPQPPNQNVSNLSSQPLPQGTGGSNIYPLPPHMHGSYKMGGQNPGPQTLLSAYPPPPSQQAQQYSQGSYPPRPQYPPGSYAPTPPNSSQPSSVNSMPPGSGPQQYAAGRPILNHGGGSPYPAYQNWVPPSGQGGGPVNVGSVPPGAPGTPGGAPMGNHIQSKGTPPPPQSGGSSRPLNYLKQHLQHKGGYGPGTGPPQGYGNGPGMHPGMPMGPPHHMGPPHGPTNMGPPTSTPPQPMMGGAVGTPDGNSGPPPPPDHISQDNGISSSGSSSSASGPPHPVTSVVTTGPDGTPMDEASQQSTLSNASAASGEDPQCTTPKSRKNDPYVQSHLAPPSTSPVGMVGTGPHAGHTGVPGEEYEMSSPPNWARTPASPGFNSHVPQQDAFRTTGATATPISASAANKKSDSLCKLYEMDDAPERRVWLDKLRAFMDERRTPITACPTISKQPLDLYRLYLYVKERGGFVEVCKVTKSKTWKDIAGLLGIGASSSAAYTLRKHYTKNLLAFECHYDRGDIDPLPIIQQVEAGTKKKSTKAASVPSPAGSSNSQDAFPAPGTAANASIDGYPPYPGGYPGAGPQPDYGAAGQMPRPPSQSNAQSPHPGSPYPGQPGAYGQYASGDQYNSSGQPGQFGQQQGQFPPQNRNMYPPYGPEGEAPPTGSNQYGPYGNRPYSQPPPGSSQTSTPPVAPSSASGPGPGGPATGGSPYPPGQQEYYRPPEQSPQPRRHPDFVKDSQPYPGYSARPQIYGGWQGSSNQYRSQYPSTPSPQTWGSAPPRTAAPAGGPLGPPGQQTPTASGTTQWDQHRYPPQQQPPPPQQQPPYQQQSQQQPPPPQWAQAMSASGANPPGAPSAGTPGSPLRPPATGQQQRIPASAAASISGSPGPQPGQQVCPPSTSNAPTGLPSSSLGKPPFSMPPPQTSSAGVPVPAGSNAMTGVMSVPQKPVTPVGGSGAVGAPPPPPQAPFPQFAKKEIVFPPDSVEATSPVLYRRKRLTKTDVCPVDPWRIFMAMRSGLLTECTWSLDVLNVLLFDDSTVQYFGLSHLPGLLTLLLEHFQKNLAAMFKDEGDEDKSFAGPKNEKKRLTRSNYLRNDKRNREAAAVGDDLKNAKIDGSSENEETDEDEDIDLGQVRVPPNPEERVVLLAHTPNYTMMSRKGLPVRLQSAEHDIFVIDDLKPWDAEGGEKFEESVPVGCNAWTYGFTDPDTNAGIIDVFKSEIIDIPFARYIKTKGKSCNKCHKIKIESDSVKSKQDSQNECDRDEEVEARLQQHAFNKKRRLFNNSNAVGCTNNNNGNQLIGEPSESKKLKLQAAMEDEEQKVSLTHLEISREETEAALATSNNTDSDCREIDMELETISSSKDTTKEFDPKSTARDPALVLQRRRSSSSLEDECYTRDESSLYLVNESQDALARRCICISNIFRNLSFVPGNETILAKSPRFLAVLGRLLLLYHEHLPRPPKNRNYDRGSEEDTDFSDSCSSLQGEREWWWDYLISIRENMLVIMANIAGHLELTRYEELIARPLVDGLLHWAVCPSAHGQDPFPSCGPTSSLSPQRLALEALCKLCVTDNNVDLVIATPPFARLEKLCAVLTRHLCRNEDQVLREFSVNLLHYLAAADSAMSRTVALQSPCISYLVAFIEQAEQTALGVANQHGINYLRENPDSMGTSLDMLRRAAGTLLHLAKHPDNRSLFMQQEQRLLGLVMSHILDQQVALIISRVLFQVSRGPGTTINSLEYRIQQKQQQKSGNIEKKASGRELISKEGTNVAAKTEMKVEPSETVNSISHNSCDGGLVTTDVINGNKIISNSSSSSVMVSADSENSNSSSQITPAAAYNDVSNSSTNSNSCGTAVSSQSNMSNNSSSSSNICNSQNNNLSNNYSNATANYIHSNSIATSEHLKSNILSSVTQTNTPLTSNNSSNVNLNSNSIVASTVASSQAPPPPSPSTAPAQAPTANTTTTAAVA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00747258;
90% Identity
iTF_00749478;
80% Identity
-