Basic Information

Gene Symbol
Kdm5
Assembly
GCA_000688735.1
Location
Scaffold234:341918-351576[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2.4e-26 9.4e-23 80.5 0.1 2 89 200 283 199 283 0.95

Sequence Information

Coding Sequence
ATGTCAAATAAAACCACTGTTGACAATAACAGTAGCGCCATTAACAGCCCCGCTGGTTCAACATCTTCAACCACCACGAACGGTACAGTAACACCTGTCAGACGTCTAAGAACTAGAACATCAACAAATGGTAACGTTAGTGGCAATGAATCAGCACATaaaaaaaaTGGTTCAGTTGTGGAACGAGTTAACTCCACTTGCGATACGAGCCTAAATACAGGAAACATTAGTGGTAACTCCGACGAAAAGCCTAGCGCCAGCAAAAAGTATCATAACAGTTGCCCACAACCGACCGCAGCAAATCGGAAAGAGAAAATTCATTTTCAACCCCATAGCTCTAGCTCCTTCGATATGAGTAAAACGGAAGAATTCCATTTTGATACGCCACTCGAGTGTCCAGTTTTTCGACCCACTTCGGAGGAATTCAAAAGTCCTCTCGCATATATTAGTAAGATACGACCTATCGCAGAGAAATGTGGTATCGCTAAAATATTGCCACCAGAGTCTTGGTCTCCGCCATTTGCCGTAGATGTAGATAAATTAAAATTCACTCCTCGCGTGCAACGCCTGAATGAATTGGAAGCCAAAACTCGTGTAAAACTAAATTTTCTTGATCAGATCGCCAAGTTTTGGGAATTGCAAGGTTCTTCACTTAAAATACCAATGGTTGAACGGAAAGCCCTCGACTTATATACATTACACCGCGTCGTGCAGGAGGAAGGTGGTATGGAACAGACAACGAGGGAACGTAAATGGGCTAAAGTCGCTAACCGCATGTCATATCCATCTAGTAAGAGTGTTGGTGCTACACTCAAGGCACATTATGAACGTATATTACATCCTTTTGAGGTATACACATCGGGCAAAGTGTTGGGCACGACAGGTACGGCATCCTCTAACGCTGAAATAAAGCTAGAAGACGGTACTGATTATAAAGCTCATGAAATACCCACACGTCAACAAATCGCTCCTCCCAATGAAAATAATGCTCGACGTTCCAAACGTTTTGCTAACTCCAATGCCAGTTGTGGCTTGAGCGGAAACAGAGTTATTAAAACAGAGTCAAAGGAAGACTTTAAGCGCGATTTAATGAATTCATTTAATTCACCCGCTCCTGCAGCTACAACGGAAAACCGAACTAACGGAAACATTATTCCGAATGCAACGCAGAAGAAAACTTCAGATTCCACTGTGGTCGACCCACTGATGAAATATATTTGCCATATTTGCAATCGTGGCGATGTCGAAGAGTCAATGTTATTATGTGATGGTTGCGATGATTCATATCACACATTCTGTCTATTGCCACCATTATCTTGTATACCGAAAGGCGAATGGCTTTGTCCGCGTTGTGTTGTAGAGGAAGTGAGCAAGCCTACAGAAGCCTTTGGATTCGAACAAGCTGAACGTGAATACACGTTACAACAGTTCGGACAAATGGCTGATCAATTTAAAATGGACTACTTTCGAAAACCGGTTCACCTAGTTCCTACCGACTTAGTAGAACGTGAATTTTGGCGAATTGTGTCTTCCATTGATGAAGATGTTACAGTGGAGTATGGAGCAGATTTACATACGATGGATCACGGTTCAGGCTTTCCAACTAAAAGTTCTCTTTATCTCTTGCCTGGAGATCAAGAGTATGCTGAATCCAGCTGGAATTTAAACAATCTTCCCTTGTTAGAAGATTCTATTTTGGGACATATAAACGCTGACATTAGTGGCATGAATGCTCCGTGGATGTATGTCGGCATGTGTTTCGCAGCATTCTGCTGGCATAACGAAGATCATTGGAGTTATTCTATCAATTATTTGCATTGGGGCGAGCCAAAAACTTGGTATGGAGTTCCTGGAAGTTGTGCTGAACAATTTGAGGAGACCATGAAGCAAGCAGCTCCTGAGCTATTCGCTTCACAACCAGATTTATTACATCAATTGGTGACTATAATGAACCCCAATATTTTAATGAATAACGGCGTCCCAGTGTATCGAACGGATCAAAATGCTGGCGAATTCGTCATTACCTTTCCTCGTGCTTACCACGCAGGCTTCAATCAGGGTTATAACTTTGCCGAAGCTGTAAACTTTGCTCCAGCTGATTGGTTAAAAATGGGACGTGAATGCGTAAATCACTACTCTATGTTGCGTCGTTTCTGCGTTTTCTCACACGATGAACTTGTTTGCAAAATGGCTTTAGAACCAGCCAAGCTTACGTTCGGCATTGCAACAGCATGCTATATTGACATGGCTGAAATGGTAGATTCAGAAAAGAAATTACGTAAATCTCTACTAGAATGGGGTGTTACGCGCGCAGAACGAAAGGCATTCGAACTTATACCGGACGACGAACGCCACTGTCAGGAGTGTAATACAACGTGTTTCCTTTCTGCTGTGTCTTGCGAGTGCACAAAAGCTATAGTTTGCTTACGGCATTATATAGTACTATGTGGTTGTCCTCCAGAAAAGCACACACTTTTATATCGCTATACGCTTGATGAAATGCCACTAATGTTGCAAAAGCTCAAAACAAAAGCACAAAGCTTCGAAAAGTGGTTATCGCGATGCCGTGATATTGTGGACGCGAACACTCCGACATCGGTAACATTACAAGAACTACAAGAGTTATGCAAAGAGGCTGAATTGAAGAAATTTCCGTCATCCCTTCTTATCGATCGTTTAAACGCTGCCGTTCTCGAAGCTGAGAAATGCGTTACAGTTATTCAGCAGCTCGGTATCAATAAAGTCCGGACACGGTCTGATAACAATTTGGAAGCTGCTCAATACAAGCTTACAATGGAGGAACTGGAACTGTTTGTACAGGAAATTGATAATTTATGCTGTATTATTGAAGAAGGAACTTCTGTCCGCGAACTTCTAATACTAGGCAAGCAATTTGAAGAGCGCGCTAATGAAATGTTGCGGCACTCTTTGGATGCTCTTGAAGAATCTGAATTAGAAACACTTATTACTGAAGGGAATTCTTTACGTATTGAATTATACCAAGTACATCAATTAAACATACGTTTAAAACAGTTAAAGTGGTACAAGCGTTCGCAAAGTATACGAAATGCGAGTACAAAACTTAGCTACGATGATATAAAAAATCTTCTACATGTCGATGCTACCGATATAGCTCCTTCAGACCCAGTAATTGATAAAGAAATAAGAAAATTGCAAGAGATCGGTGCCTCAATTGAGGCATGGGAAACTCGGGCGGTTAGATATTTTAATTGCGTAATACAAAGGAACGAATTGATCGAAATAGATCAATTTTTAAAGACAGCTACAGATATTGAAGGACAAGTGCCCTCATACGGTTTGTTAAAGGACGCTTTACGGAAGGCTAAAGATTGGCTGAGATCTGTCGAGCAATTGCAAACCAACGATCATTTTCCTTATTGTCATACTTTGGAGAGTATAGTAGCGCGGGGCAAAAATATTCCGGTAAAATTAGAAGAATTAGTTCGTATGCAAGGACACTTGAAAAGTGCTCATGAATGGAAAGAAAATACCGAACGTGCTTTTCTTAAAAAGCAAACATTCTACACATTGCTGGAGGTATTGATGCCTCGTTCTGAACCCGTTATTATTGATTCAGATTTGAAAAAACCTTTCGAAGACGATTTTGTAAAAGAAATGAATCCTGCACAAATAGTTGAGTCATTTAAAGTAGCGGAAGAGAAAGAGTTGGTTGAAATGCGTGGTTTAAGGAGTCAAAACGTGGCGAAGAATCCATCACGAGATGACTACTGTTTATGCAAATCGTCTTTCCACGGAATAATGTATAATTGTCAATTATGTCGCGATTGGTTTCATGAGGGTTGCATATCCCCTCCTTCGGTTCAGAATGACTCTATAAACACATTAAAAATAAAGTGGTTATGTCCATCTTGTGTGCGTTCTAAGCGACCACGTCTAGAGACAATTTTACCTTTGCTCGTTTCTTTACAAACATTACCCATTCGTCTGCCCGAAGATGAAGCGTTACGGTGTCTTGCCGAGAGAGCTATGAATTGGCAAGATCGAGCTCGCAAGGCTTTGACCAGTCCAGATGTAACTGCGGCACTGGAGGCGATCATTTCGTCACAGCACCGTATTAAACAGAAACGGAAGAGCTGCGGCAGCATAGGGTTTAATTTAGAGCCACGAAAATTTCGACGTACCAGCCAACGCAACTCAAAAGATGAAGGATCGGAAAATGTAGATTCTGATGAAGATGAAGATCGCTTGCACATTGTGGAAGAGAATTTCAGTAATGATGAGGAAGACGATAATACTTCTGCTGAGGCAGACGGTAGTACAGATAGCTGCATACGTCCTAATAAACTGTTATCGGACAGTGAAATTAATAATCTAGATGAGCTCATGATGGAAGGCGATCTGCTCGAGGTGTCACTCGATGAATCCCAAGAAATTTGGCGCATTCTCTCAACAATGCAACCAACCACTAACACTGAAGCAGTCGCCCTTGTAGAACAAACTCAATTGCTTCGAAAACAACAACAACAACAGCACTTAAGTCAATCAGATTTAAGTATAAATTCCGCTGCTGAAGACTCGAACGACAGTCTGCTGGTACAAAGTAGTCCGAACAGCAATAGTAATAGCGGGAGCGTTAGCGGACGTACATCGATAATCGCAGTAAAGAAAAGGCGACCATTAGATTCAAGTACTGGATGTCCATTACCCCGTAAAAAGATTGCGCCGCTTACCAAACAAACTGTTTCAATAACAACATTACCGGTTGCATCATCAACaaaaaaaTCTGCGAGAAAATCGGACACTGGGAAACATATTGACGTTAATATGGAAAATATTAATCTCGCGAGTAAACAACCGAACGGGAATGGATTGCAAACTGCTAATAATATTGGACCAGCGCAGAAAAAGCAAAGAAAACGCATTAATAATAATAGCGGAGTGAACATGAATTCATCTACCGGTCAAAAGAAGAATTCCCAGAGGGCGCAATTAACGCAACAAGAGGATGATGAAGAAGAATGCCGTGCAGAAAGCTGTCATAAGCCTACCGGCAGAGAGGTAGATTGGGTGCAATGTGACGGTGGTTGCAATGAATGGTTCCACATGTTTTGTGTTGGTCTAGACCGCAGCGAAATAAACCCAGACGATGATTACATTTGTATTCGTTGCTCCAAGGCTATGACAAGTGTAACAGTGGTCCCTGGTAACGAAGATGAACAAGAAACACCACCACCATCTTCCGGCACTCAGCAAAAAGGTCGCACTCAAATAACCCGATAA
Protein Sequence
MSNKTTVDNNSSAINSPAGSTSSTTTNGTVTPVRRLRTRTSTNGNVSGNESAHKKNGSVVERVNSTCDTSLNTGNISGNSDEKPSASKKYHNSCPQPTAANRKEKIHFQPHSSSSFDMSKTEEFHFDTPLECPVFRPTSEEFKSPLAYISKIRPIAEKCGIAKILPPESWSPPFAVDVDKLKFTPRVQRLNELEAKTRVKLNFLDQIAKFWELQGSSLKIPMVERKALDLYTLHRVVQEEGGMEQTTRERKWAKVANRMSYPSSKSVGATLKAHYERILHPFEVYTSGKVLGTTGTASSNAEIKLEDGTDYKAHEIPTRQQIAPPNENNARRSKRFANSNASCGLSGNRVIKTESKEDFKRDLMNSFNSPAPAATTENRTNGNIIPNATQKKTSDSTVVDPLMKYICHICNRGDVEESMLLCDGCDDSYHTFCLLPPLSCIPKGEWLCPRCVVEEVSKPTEAFGFEQAEREYTLQQFGQMADQFKMDYFRKPVHLVPTDLVEREFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKSSLYLLPGDQEYAESSWNLNNLPLLEDSILGHINADISGMNAPWMYVGMCFAAFCWHNEDHWSYSINYLHWGEPKTWYGVPGSCAEQFEETMKQAAPELFASQPDLLHQLVTIMNPNILMNNGVPVYRTDQNAGEFVITFPRAYHAGFNQGYNFAEAVNFAPADWLKMGRECVNHYSMLRRFCVFSHDELVCKMALEPAKLTFGIATACYIDMAEMVDSEKKLRKSLLEWGVTRAERKAFELIPDDERHCQECNTTCFLSAVSCECTKAIVCLRHYIVLCGCPPEKHTLLYRYTLDEMPLMLQKLKTKAQSFEKWLSRCRDIVDANTPTSVTLQELQELCKEAELKKFPSSLLIDRLNAAVLEAEKCVTVIQQLGINKVRTRSDNNLEAAQYKLTMEELELFVQEIDNLCCIIEEGTSVRELLILGKQFEERANEMLRHSLDALEESELETLITEGNSLRIELYQVHQLNIRLKQLKWYKRSQSIRNASTKLSYDDIKNLLHVDATDIAPSDPVIDKEIRKLQEIGASIEAWETRAVRYFNCVIQRNELIEIDQFLKTATDIEGQVPSYGLLKDALRKAKDWLRSVEQLQTNDHFPYCHTLESIVARGKNIPVKLEELVRMQGHLKSAHEWKENTERAFLKKQTFYTLLEVLMPRSEPVIIDSDLKKPFEDDFVKEMNPAQIVESFKVAEEKELVEMRGLRSQNVAKNPSRDDYCLCKSSFHGIMYNCQLCRDWFHEGCISPPSVQNDSINTLKIKWLCPSCVRSKRPRLETILPLLVSLQTLPIRLPEDEALRCLAERAMNWQDRARKALTSPDVTAALEAIISSQHRIKQKRKSCGSIGFNLEPRKFRRTSQRNSKDEGSENVDSDEDEDRLHIVEENFSNDEEDDNTSAEADGSTDSCIRPNKLLSDSEINNLDELMMEGDLLEVSLDESQEIWRILSTMQPTTNTEAVALVEQTQLLRKQQQQQHLSQSDLSINSAAEDSNDSLLVQSSPNSNSNSGSVSGRTSIIAVKKRRPLDSSTGCPLPRKKIAPLTKQTVSITTLPVASSTKKSARKSDTGKHIDVNMENINLASKQPNGNGLQTANNIGPAQKKQRKRINNNSGVNMNSSTGQKKNSQRAQLTQQEDDEEECRAESCHKPTGREVDWVQCDGGCNEWFHMFCVGLDRSEINPDDDYICIRCSKAMTSVTVVPGNEDEQETPPPSSGTQQKGRTQITR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01235504;
90% Identity
iTF_00749479;
80% Identity
-