Basic Information

Insect: Globia sparganii
Gene Symbol: -
Assembly: GCA_949316385.1
Location: OX438681.1:1470688-1493518[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.3 31 6.4 0.6 1 23 340 363 340 363 0.95

2 12 0.32 32 6.3 0.5 1 23 371 393 371 393 0.94

3 12 0.3 31 6.4 1.4 1 23 397 419 397 419 0.96

4 12 7.5e-05 0.0076 17.7 1.0 1 20 426 445 426 447 0.94

5 12 0.0059 0.6 11.7 1.0 2 21 454 473 454 474 0.92

6 12 0.0002 0.02 16.4 0.6 2 23 490 511 489 511 0.94

7 12 0.00059 0.06 14.9 0.3 1 23 516 538 516 538 0.97

8 12 0.03 3.1 9.5 4.8 1 21 547 567 547 572 0.93

9 12 3.1e-05 0.0031 18.9 2.3 1 23 580 603 580 603 0.93

10 12 0.0063 0.64 11.6 0.4 1 23 609 632 609 632 0.94

11 12 0.022 2.2 10.0 0.3 3 19 645 661 643 662 0.89

12 12 0.044 4.5 9.0 0.9 1 23 675 698 675 698 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.3	31	6.4	0.6	1	23	340	363	340	363	0.95
2	12	0.32	32	6.3	0.5	1	23	371	393	371	393	0.94
3	12	0.3	31	6.4	1.4	1	23	397	419	397	419	0.96
4	12	7.5e-05	0.0076	17.7	1.0	1	20	426	445	426	447	0.94
5	12	0.0059	0.6	11.7	1.0	2	21	454	473	454	474	0.92
6	12	0.0002	0.02	16.4	0.6	2	23	490	511	489	511	0.94
7	12	0.00059	0.06	14.9	0.3	1	23	516	538	516	538	0.97
8	12	0.03	3.1	9.5	4.8	1	21	547	567	547	572	0.93
9	12	3.1e-05	0.0031	18.9	2.3	1	23	580	603	580	603	0.93
10	12	0.0063	0.64	11.6	0.4	1	23	609	632	609	632	0.94
11	12	0.022	2.2	10.0	0.3	3	19	645	661	643	662	0.89
12	12	0.044	4.5	9.0	0.9	1	23	675	698	675	698	0.97

Sequence Information

Coding Sequence: ATGCCAGCCAACAAACGACCGAGAAAGACGACACGAGGTCTCTATGATATAGCACAGTTTGAAGCTGCTTATGACCAAATTGTCAATCACGGGGTGTCCTTACGACAAGCGGCCAAAATGTTCGATATCACACACGTCACCCTCCAAAGGTACAAGAAACGGCGTCAAACCACAAATTTTCCTGTTAAAGTCGGTTATGCACGTAACAGTTTTTATACAGCAGAACAAGAAACTGTCCTAACGAAATATTTGACTAAATACGCGGAGATATATCCTGCGCTATGCGTGAGGGTAGTCAGAAAGTATGCCACGGAATTCAGCCAGAAGCTGGGTTTGAAAACTCCGAAGCCTTGGGTTGACAATGAAATGGCTGGCGTTGATTGGTACAAGAACTTTATGTATAGAAATAAAGagttaaaagataaaattgatcgGCAGACTGCTCAAGAAAAAGTTAGAGTTTTTTATGATCGGCTGTGGAGTATTTTGTGCCAGTACAATTTTGGTTCAGAAAACATTTACTCTTTAGACGAAATAGGTGTTAATATAGAAGAGTTTAGAGATAAAATTTGGTTGATTACGACGAAAAATGGCCCTATAGCTTTGAAAGAGTCTAAAGTTATGTTCACTTACGCAGCGAACGCCAAGGGCTATGTCATACCcccattatttttaatacaacgAGAGAAAATAAAAGATGCGCCGAAAAACAACGCTGAAGTCAAAATAGAAAAAGATTTGGTGAATGATTCCGATTACTCGAACGagacaacttttaataagttcTTAAAAAATGGCGTCGATTTAAAAAACCTACCTGATTGGACGGAAGATCCTAATTTCTTGGTGGACTTCCCAAAGCGCCAGAAGACCAAGAAGGACAAAAACCCCAACAAAAAGAGTAGGAAGCTAAAGAATCTTCCAGAAGAGCTGGTAGAATTGTACACTATGAGTAAAGAAGAGATGTGGGCTATCAGGATTGAGGATCTCAACAGCAAGGAGTTCCAGAAGCTTAAGTATAGGTGTGATGATTGCATCATTGCGTTCAACACTGAGAAATTGATGCATGACCATCTAAATGGAAAACACCAACCTaaaagtgaAGACTGCCATCAGTGCTCAATCTGTCAGGCCTATTTCCTAACTAAAGACAACGTGGCCGCGCACAAGGCGTTACATCAACAGGGTTATAAATGTCGCGAGTGTGGGTTTAATACTACGCTCAAACGGCGTATGTTGAAACATGTTGCGTCTCATGCGCCGAGTGGGGAAGCTCACGTGTGTCAGACTTGTGGAACCAGctttagCACAAAATCGAAGCTAACATACCACCGCGGCGTTTGTCGTCAAGAAAAGCCACAATGTGATTGCTGCGGAAAGGTTTTCGCCAACAAAATGACGCTCAAGTACCACCTCAAAATTCTGCCTCAGAATAAAGATGATAAGCCTAAGGAGAAGTTATTCATACCGTGCAAGGGATGTGATAAAGTGTTCCACTCAAAAAAGAGCTATAGAGCGCACGTTGTAATCCACGACGGCCTAACCTATCCTTGCCCAATCTGCGGCAAACTGTTCCAATGGAAGCGCAACCTGGCGCGACACTCGCGCAACCATCGCGAGCGGCAGGCGGGCAACTTGCACGAGTGCCGCGCTTGCAGCAAGACCTTCGCGAGCAGGGATTGCTATAACAACCACATGCGACTCAGCAAGAAGCACGTGTCGCAGGATACTTTCCCGCACGAATGTAACTACTGCGGAAAGAAATTCGCTACAAAATGGTGTCTGACCGACCACATCGACTGGGACCACTTGAAGAAAATCAAATACCAATGTTCATTTTGTTTTAAGGCATTTAAAACAGCTAAAATATTGGTGGCTCACGTCAATAATATACATGAGGGAAAGAAAAAGGAAGCGGAGGGCGAACATCTGTGCGAAATATGTGGGAAATCATACAGGACAGTGAAACGCCTAAAGGGCCACGTATGGGCGATGCACACAAAACGATCCAGTAGCAAGATATACAAATGTAAGCTGTGTCCGGCGACGTTCATGTGGCAAACTAGCATATACAAGCATATGAAGATGATGCACGAAAATAATAAGAAGAGTAAGACACCGCGCGCCGTCCAACCCGTGAAGAAAGAAGAACcctacccgggaatcgaactagCGAACCGCATGCAGTACTTCCAACAAAACATTGGCGGCAGCTTAAATATAGTTCACATACAGCCTTTGGAAATGACTCACAATATTGTTTAA
Protein Sequence: MPANKRPRKTTRGLYDIAQFEAAYDQIVNHGVSLRQAAKMFDITHVTLQRYKKRRQTTNFPVKVGYARNSFYTAEQETVLTKYLTKYAEIYPALCVRVVRKYATEFSQKLGLKTPKPWVDNEMAGVDWYKNFMYRNKELKDKIDRQTAQEKVRVFYDRLWSILCQYNFGSENIYSLDEIGVNIEEFRDKIWLITTKNGPIALKESKVMFTYAANAKGYVIPPLFLIQREKIKDAPKNNAEVKIEKDLVNDSDYSNETTFNKFLKNGVDLKNLPDWTEDPNFLVDFPKRQKTKKDKNPNKKSRKLKNLPEELVELYTMSKEEMWAIRIEDLNSKEFQKLKYRCDDCIIAFNTEKLMHDHLNGKHQPKSEDCHQCSICQAYFLTKDNVAAHKALHQQGYKCRECGFNTTLKRRMLKHVASHAPSGEAHVCQTCGTSFSTKSKLTYHRGVCRQEKPQCDCCGKVFANKMTLKYHLKILPQNKDDKPKEKLFIPCKGCDKVFHSKKSYRAHVVIHDGLTYPCPICGKLFQWKRNLARHSRNHRERQAGNLHECRACSKTFASRDCYNNHMRLSKKHVSQDTFPHECNYCGKKFATKWCLTDHIDWDHLKKIKYQCSFCFKAFKTAKILVAHVNNIHEGKKKEAEGEHLCEICGKSYRTVKRLKGHVWAMHTKRSSSKIYKCKLCPATFMWQTSIYKHMKMMHENNKKSKTPRAVQPVKKEEPYPGIELANRMQYFQQNIGGSLNIVHIQPLEMTHNIV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00364374;
90% Identity: iTF_00745600;
80% Identity: iTF_00745600;