Basic Information

Insect: Globia sparganii
Gene Symbol: ZNF296
Assembly: GCA_949316385.1
Location: OX438682.1:11039672-11051595[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 3.5e-05 0.0036 18.7 0.8 3 23 115 135 114 135 0.98

2 10 0.00012 0.012 17.0 3.2 1 23 141 163 141 163 0.98

3 10 0.076 7.7 8.2 2.9 1 23 226 248 226 248 0.96

4 10 0.00079 0.08 14.5 2.3 1 23 283 305 283 305 0.96

5 10 0.0021 0.21 13.1 3.0 1 23 311 333 311 333 0.98

6 10 0.17 17 7.1 7.2 1 23 342 364 342 364 0.98

7 10 2.9e-05 0.0029 19.0 0.5 2 23 439 460 439 460 0.97

8 10 0.0044 0.44 12.2 3.8 1 23 477 499 477 499 0.96

9 10 1e-06 0.0001 23.6 0.7 1 23 505 527 505 527 0.98

10 10 3.5e-07 3.6e-05 25.0 3.1 1 23 533 556 533 556 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	3.5e-05	0.0036	18.7	0.8	3	23	115	135	114	135	0.98
2	10	0.00012	0.012	17.0	3.2	1	23	141	163	141	163	0.98
3	10	0.076	7.7	8.2	2.9	1	23	226	248	226	248	0.96
4	10	0.00079	0.08	14.5	2.3	1	23	283	305	283	305	0.96
5	10	0.0021	0.21	13.1	3.0	1	23	311	333	311	333	0.98
6	10	0.17	17	7.1	7.2	1	23	342	364	342	364	0.98
7	10	2.9e-05	0.0029	19.0	0.5	2	23	439	460	439	460	0.97
8	10	0.0044	0.44	12.2	3.8	1	23	477	499	477	499	0.96
9	10	1e-06	0.0001	23.6	0.7	1	23	505	527	505	527	0.98
10	10	3.5e-07	3.6e-05	25.0	3.1	1	23	533	556	533	556	0.98

Sequence Information

Coding Sequence: atgcgataccccttgGTCCAAGACGAGGATCAAAAGGAGCTGGTGCCGAAAATAGACATACTGATAGAGGAGGTGAAGGTGGACTATGACGTCACGGTCAAGCGCGAGCCGTCGGACGACGAGCCGGCGCCGGACGCGccggacgacgacgacgacgcgcCGCCCCGCGGGGCCCAGGGGCCCGGTGCGGACCAGGGACCCGGTGCAGACCAGGGGCCTGGCGCGGCCAAGGAGCCCGGCGTCAAGGACGAGGACAGCCAGTCGGACTCGGACTACTTCCCGGCCGACACGTGGGCCGCGCAGGCGCCGCAgtcgccgcccgcgcgccgctCTGCGCGCGCATGCGCCGTGTGCCACAAGAGCGTGAGCTCGGCGTCCTACATGCGCGTGCACATGCGCACGCACACGGGCGAGCGGCCCTTCAAGTGCTACACGTGCGGCCGCGGGTTCATCACCAGCAGCAAGATGCACCGCCACGTGCTCACGCACGCGCAAGACAAAGACGATGTCAAGACGGAAGGAGAAGACACCAAACCGGAAGTGGACGACAATGTGGACCAACAGCAAGGAGATGGCGCTAAAAAACCAGCgaagaaaaaatccaaaatgaaATCGAAGTCGTCAAAGCTGAAGAGTGGCGAGGAGAAGCCGCGCCGCAAGCACCAGAAGAGGCCGCACGCCTGCGAGTACTGCAACCAGAAGTTCCTGCACCTGAACATGCTGGAGGTGCACCGCCAGTCGCACGCGGGCGAGGCGCTGGTGCTGCGCTGCCACTACTGCCTGCAGGAGGCGCCGGGCGGCGCGGCACTGCGGGCGCACGAGGCGCAGCACCAGGGGGCCAAGCCCTACCTGTGCACCGTCTGCGGGAAGACCTACAAGAAGAGGGAGACTATGGTGTACCACCGCAAGCGCCACGCTCCGGACAAGGAGTTCGTGTGCGACGTGTGCTCCAAGCGCTTCCCGGCCGCCTGCAAGCTGCACAAGCACCTGCTCACGCACCGGCGCGACGCCTTCGTGCTGCGCTACGAGTGTCCCGTGTGCGCGCACATGTTCCACACGCGCTACCACGTGCACATGCACCTCAGCACGCACCAGAAGGAGGGCCTGATCCTAGAAGAGAATCGCAGCGAGATCTTGGCGATGGTCCTACAGAACGCGCGAAAGATCCCGCGCGCGGGCGCCGCGCCGGGCGCGCACGCGCACGTGTCGCCTGCGCATGCGCAGTCGGCGCCCGCGCACGCGCACGCGCAGTCCGCGCAGGCGCACGCGCAGCCCGCgcacgcgcccgcgccgccgggCGACGAGCGCTCGCGCGTGTGCAACATCTGCGGCGCCGTGTTCTCGCACTTCTACTACCTGGAGGAGCACCTCAAGAGCCACGGCGAGCGCATCGCCGTCGCCGACCTCGACAAGCCGGAGGATAAGAAATACATCTGTCAGATCTGCAACAAAGGCTTCAAGCTGCACTACTACCTCAAACTCCACAGCTTCACGCACTCGAAGGAGAAGCCCTTCATCTGCCAACAGTGCGGGAAGGGCTTCATCACGAAAGGTAAACTGAAAAGACATTTGGAGACTCACACGGGGCTGAAGAAGTATCAGTGTCATATCTGCTACAAGTTCTTCACGCGGCCCAGCTACCTGCGCATACACGTGCGCACGATACACGGCACGCAGGACTATAACTTCCGGTTCGACAAAGGGTACGGACTCGGCTCCCTCGCGCCACCCATGGCCATGTCAGATGTCAGTCAGAATAGTATATAA
Protein Sequence: MRYPLVQDEDQKELVPKIDILIEEVKVDYDVTVKREPSDDEPAPDAPDDDDDAPPRGAQGPGADQGPGADQGPGAAKEPGVKDEDSQSDSDYFPADTWAAQAPQSPPARRSARACAVCHKSVSSASYMRVHMRTHTGERPFKCYTCGRGFITSSKMHRHVLTHAQDKDDVKTEGEDTKPEVDDNVDQQQGDGAKKPAKKKSKMKSKSSKLKSGEEKPRRKHQKRPHACEYCNQKFLHLNMLEVHRQSHAGEALVLRCHYCLQEAPGGAALRAHEAQHQGAKPYLCTVCGKTYKKRETMVYHRKRHAPDKEFVCDVCSKRFPAACKLHKHLLTHRRDAFVLRYECPVCAHMFHTRYHVHMHLSTHQKEGLILEENRSEILAMVLQNARKIPRAGAAPGAHAHVSPAHAQSAPAHAHAQSAQAHAQPAHAPAPPGDERSRVCNICGAVFSHFYYLEEHLKSHGERIAVADLDKPEDKKYICQICNKGFKLHYYLKLHSFTHSKEKPFICQQCGKGFITKGKLKRHLETHTGLKKYQCHICYKFFTRPSYLRIHVRTIHGTQDYNFRFDKGYGLGSLAPPMAMSDVSQNSI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00302436;
90% Identity: -
80% Identity: -