Basic Information

Insect: Globia sparganii
Gene Symbol: -
Assembly: GCA_949316385.1
Location: OX438682.1:6385480-6399239[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 25 0.018 1.9 10.2 3.3 1 23 243 266 243 266 0.93

2 25 0.27 28 6.5 0.2 2 23 292 314 291 314 0.95

3 25 0.075 7.6 8.3 2.3 1 23 336 358 336 358 0.97

4 25 0.23 23 6.8 2.5 1 23 362 384 362 384 0.90

5 25 0.03 3 9.5 1.6 1 23 388 411 388 411 0.94

6 25 0.61 62 5.4 4.9 2 23 418 440 417 440 0.94

7 25 0.0079 0.8 11.3 0.5 1 23 447 470 447 470 0.95

8 25 0.002 0.21 13.2 3.6 1 23 476 498 476 498 0.98

9 25 4.8e-06 0.00048 21.5 2.7 1 23 504 526 504 526 0.98

10 25 4.5 4.5e+02 2.7 0.5 1 14 532 545 532 548 0.89

11 25 0.37 38 6.1 0.7 1 23 584 606 584 606 0.94

12 25 0.0045 0.46 12.1 0.4 2 23 678 700 677 700 0.94

13 25 0.0064 0.65 11.6 1.7 2 23 706 728 705 728 0.94

14 25 0.012 1.2 10.8 0.8 1 23 733 756 733 756 0.96

15 25 0.51 52 5.6 0.1 2 23 759 781 758 781 0.92

16 25 0.081 8.2 8.2 2.2 2 21 788 807 787 808 0.93

17 25 0.005 0.5 12.0 0.5 1 23 867 890 867 890 0.91

18 25 0.043 4.3 9.0 0.2 3 23 919 940 917 940 0.92

19 25 0.018 1.9 10.2 0.4 2 23 963 986 962 986 0.95

20 25 0.00089 0.09 14.3 0.6 3 20 993 1010 991 1014 0.90

21 25 0.48 49 5.7 0.3 1 23 1019 1042 1019 1042 0.96

22 25 0.00018 0.018 16.5 0.2 2 23 1048 1070 1048 1070 0.96

23 25 0.00011 0.011 17.2 4.8 1 23 1074 1097 1074 1097 0.97

24 25 0.0042 0.42 12.2 0.9 2 23 1104 1125 1103 1125 0.96

25 25 0.082 8.3 8.1 1.2 1 23 1131 1154 1131 1154 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	25	0.018	1.9	10.2	3.3	1	23	243	266	243	266	0.93
2	25	0.27	28	6.5	0.2	2	23	292	314	291	314	0.95
3	25	0.075	7.6	8.3	2.3	1	23	336	358	336	358	0.97
4	25	0.23	23	6.8	2.5	1	23	362	384	362	384	0.90
5	25	0.03	3	9.5	1.6	1	23	388	411	388	411	0.94
6	25	0.61	62	5.4	4.9	2	23	418	440	417	440	0.94
7	25	0.0079	0.8	11.3	0.5	1	23	447	470	447	470	0.95
8	25	0.002	0.21	13.2	3.6	1	23	476	498	476	498	0.98
9	25	4.8e-06	0.00048	21.5	2.7	1	23	504	526	504	526	0.98
10	25	4.5	4.5e+02	2.7	0.5	1	14	532	545	532	548	0.89
11	25	0.37	38	6.1	0.7	1	23	584	606	584	606	0.94
12	25	0.0045	0.46	12.1	0.4	2	23	678	700	677	700	0.94
13	25	0.0064	0.65	11.6	1.7	2	23	706	728	705	728	0.94
14	25	0.012	1.2	10.8	0.8	1	23	733	756	733	756	0.96
15	25	0.51	52	5.6	0.1	2	23	759	781	758	781	0.92
16	25	0.081	8.2	8.2	2.2	2	21	788	807	787	808	0.93
17	25	0.005	0.5	12.0	0.5	1	23	867	890	867	890	0.91
18	25	0.043	4.3	9.0	0.2	3	23	919	940	917	940	0.92
19	25	0.018	1.9	10.2	0.4	2	23	963	986	962	986	0.95
20	25	0.00089	0.09	14.3	0.6	3	20	993	1010	991	1014	0.90
21	25	0.48	49	5.7	0.3	1	23	1019	1042	1019	1042	0.96
22	25	0.00018	0.018	16.5	0.2	2	23	1048	1070	1048	1070	0.96
23	25	0.00011	0.011	17.2	4.8	1	23	1074	1097	1074	1097	0.97
24	25	0.0042	0.42	12.2	0.9	2	23	1104	1125	1103	1125	0.96
25	25	0.082	8.3	8.1	1.2	1	23	1131	1154	1131	1154	0.93

Sequence Information

Coding Sequence: ATGGAGTTCGACGAGATTGTGGTGAAGGAGAGCCCCGGGCTTTGCCGGTGCTGTCTCTCCGAAGGATGCTACAAGGATTTGGGTACCGAATATACCTGGATGAATGAAACAGAGGTTTATGCTGATATGCTGCTAGAATGCTTCGATATTAGCATAACCCAACACAATGAAGGTCCAAATGGTCCAAACCGGCTCATCTGTGAAGTCTGCATCACTCGGTTGCGGGATGCATGCAACTTCAAGAAACAAGTCATGGACTCTGAGAAGAAATTCATTGATATGATGGGTAGGGGAGAATTTAGACCTAAGATGCTTATATACCAGGCGCAGCTAAAGTGTGAAGGTCCTGCTGCGGTGGAGGATCCTGACGATGAAGACATAGAATATCTTGAGGATGATATTGATTTTGCTGAGGTCAACCTCAAAGACGAATTAATACAGCCTTCAGTATCAGATGCCACGGTAGCCATGCTCCCAGTCAAGGGAAAGCGTGGTCGTCCTCGCAAGAATACACCAGTTAAGCCGGACAAGAGGGCCAAAGTGACCAAAGTGGACGATAAGGCCAAAACTTCGAAAGCTGTTGCTAAAGGTGAGAAACGGCGCACCACAGAGGCGTCGAGTAAGTCCTCAATGACGTCAACAAGACGCAACAAATTAATGAAGACTAACGCTATCATAGTTCTAGAAACTTCCACCGTCATCCCCTTCAAATGGCATAGACAAAATTATCTCTGTTTCTTCTGCCATCTGACTTTCAAAGACACAGATTTGCTCAAAGAACATACCAGAGACCAGCATAAGAAATCGAATATCAAAGCTGCTGTTTCATACCTAAGAAGAGATGAGAAAGTTAAAATTGACGTCTCCATACTAGAATGTCGGTCTTGCAATGGTAAATTTGATGATCTAAACGCTCTCATAGAACATCTAAAAAGCACACATAAGATACAATTCACTGAAGATTGTGGCTACGGTCTCATACCGTACTTCTTGAAAAACGATGTTTACCATTGCGCTGTTTGTAAAGAAGAGTTCCAATACTTCATGAAATTGAACCAGCATATGAATGAACACTATGGAAATTACATTTGCGAGTTATGTGGCAAATCCTTCCTAAGCCAGGATAGGTTACGGTGTCATTTCTTAACCCACGGTTCTGGATTCCACTGCAATATTTGCCCTGAAACTTTTGACTCGCTAACCCAGAAGAATAATCACGAATCGAAAGTCCACAATAAGGATAAACTTCTTAGATGTTTTTATTGCACGGAAACCTTTCAGAATTATAACCAAAGAAAGCGACATCATAATTTAATGCACGATGTTAAAGTCCCGGAGTTTTCTTGTCCGGTTTGCAGTAAGAGTTTCCAAATTATGAGCAAAATGAAAGTACATTTAAAGGAAGTTCATATAAGAGAGAAAAATTTCCCCTGTTCCATGTGCGAACAAAAGTTTTTCTCACGAACGCACGTACAAAAACACATGATCAAACATTTTGGGGAGAGGGTACATCAATGCGAAGTCTGTAAGAAGTCGTATGCAAGGAAGCAGACTCTGAGGGACCATATGCGGATACACAGTgatgaaaaaaagtttatttgtagtgtctGTAGTCAGGGTTTTGTTCAGAATCATAGTAAAAAACCGAGGAAGTACAAGGGCACAGAGTCTTCCTCAATGAGAAGGCGACGGAACCTACAAATATTATTCAATAACACATCTATTATTCCTTTTAAATGGCGTGGGAAGTACCTGTGTTTCTATTGCAGCAAAGATATTGCCGAGTATACAGAGTTAAGGAAACATACAAAAGCACATGGCAGCTGCTCCATAAAAGACCATTCTCTCAAAGTCTTAAAAGGGGGACAGAATATGGAAATCAAAATAGACATATCATTGATCACTTGCGAAGTTTGCGCGGAGACGTTACCATCTTTCGATGAAATCGTCACTCATTTGTTTGACAAACATGAACTTGAATACGATAAAGACGTAGAAATGGCTATAGAAGAGTATAAGCTTGCTGATCTCAGTTGTACGGGATGCGATGAGAAATTCACGTATTTCGGCTACCTAGTCTCCCATGTCAATAATACACACCCGAAAAACTGCCTCATTTGCGATAACTGCAACCAAAAATTCAACAAAAGGAGAGATCTGTTTTCTCACGTGAAAAATTACCATCGAGAAGGAGGGTACCAATGCGAAATGTGCCCTCAGATCTTCAACTcattgaatattttgagaaaaCACCGAAATAACAGGCATTTGACTCGATGCAACATTTGCAATTTGAAACTCCCGTCAGCTGCTTTGAGACAAAAACATATCGACTTAGAACATCCAGATGACGGGTCTTTACAATGCGATACCTGTTTCAAAGAGTTCCATACGAAACAGGGCCTCAAAATGCATTCAAGGAAATGTAAAGGAGAAGAGATTTTCGGAATCGCCATTAAAGAAGAAAATGTTGCCATGGACTTAGATCTAAACTACGAGGACCAATCCAAAAAACCTTGCGTCAAACAAATCCGAGAAAATATAGTTATAGTCATAAACATGTCTACGGCGAtaccttttaatttttataagaatAAGTTCAACTGTTTCTACTGCTCAAAAGATTTCACCGATTCCGATTTGATGAGGGAACACGCGGTTATGGAACACCCTGTGTGCGATGTAAAAGAGAAATGTATTAGGAAATGTAGGGAGTCCGTTGCTTGCGTCAAAATCGATATTTCTTCACTCGCTTGCAAAGTCTGCTTCGAATCACTGACTGACTTGGATCATTTAATCGATCACTTGATCGCGAAACACGATGCGAAGTACGACAAATCGATAACAACGTGTCTGCagccttataggctgattaaagaCAACATGGTCTGTCCACACTGTCCCGGCGAGGTATTCCGCTTTTTCGGAACGCTTCTTAAACATATGAAcgtcaaacatacaaacaacaaTATAATTTGCGTTTACTGCGGCCAAACATTCCGtagggatcaaaacttacgagTTCATATTTGGCGTCATCACAGAGCTGGGCGTTTCAAATGTAATATTTGTGCTGCTGAGTGCAATATACCGTCTCGTCTGTATATGCACATGGCTCGAGCACACGGTGTTAAAGCTGCTAAGTGTCCAAAATGTCCAGAATCTTTCGCTACGCAATATGAAAGGCAGAAACATCTGATCATCGCCCACAACACTGGACACAAATGCTCTTATTGTGGAAAACTTTTTACAAGAAACTCGTTTATGAGTAACCATATACGAAGAACGCATATGAAAGAGAAGAGTATAGAATGTTCTGTTTGCTATACAAAGTTCTTTAACACTGTCCTGTTGAAGAGGCATATGGTGAAACATAGCGGGCAGAAGAAGTATAGCTGTGATGTGTGTGGGGAGAGATTCTACTGGCGCAAGACCATGAAGACTCATAGAGATAGGCTACATAGTAAACAGCTTTATCCTGCACCCATGTAA
Protein Sequence: MEFDEIVVKESPGLCRCCLSEGCYKDLGTEYTWMNETEVYADMLLECFDISITQHNEGPNGPNRLICEVCITRLRDACNFKKQVMDSEKKFIDMMGRGEFRPKMLIYQAQLKCEGPAAVEDPDDEDIEYLEDDIDFAEVNLKDELIQPSVSDATVAMLPVKGKRGRPRKNTPVKPDKRAKVTKVDDKAKTSKAVAKGEKRRTTEASSKSSMTSTRRNKLMKTNAIIVLETSTVIPFKWHRQNYLCFFCHLTFKDTDLLKEHTRDQHKKSNIKAAVSYLRRDEKVKIDVSILECRSCNGKFDDLNALIEHLKSTHKIQFTEDCGYGLIPYFLKNDVYHCAVCKEEFQYFMKLNQHMNEHYGNYICELCGKSFLSQDRLRCHFLTHGSGFHCNICPETFDSLTQKNNHESKVHNKDKLLRCFYCTETFQNYNQRKRHHNLMHDVKVPEFSCPVCSKSFQIMSKMKVHLKEVHIREKNFPCSMCEQKFFSRTHVQKHMIKHFGERVHQCEVCKKSYARKQTLRDHMRIHSDEKKFICSVCSQGFVQNHSKKPRKYKGTESSSMRRRRNLQILFNNTSIIPFKWRGKYLCFYCSKDIAEYTELRKHTKAHGSCSIKDHSLKVLKGGQNMEIKIDISLITCEVCAETLPSFDEIVTHLFDKHELEYDKDVEMAIEEYKLADLSCTGCDEKFTYFGYLVSHVNNTHPKNCLICDNCNQKFNKRRDLFSHVKNYHREGGYQCEMCPQIFNSLNILRKHRNNRHLTRCNICNLKLPSAALRQKHIDLEHPDDGSLQCDTCFKEFHTKQGLKMHSRKCKGEEIFGIAIKEENVAMDLDLNYEDQSKKPCVKQIRENIVIVINMSTAIPFNFYKNKFNCFYCSKDFTDSDLMREHAVMEHPVCDVKEKCIRKCRESVACVKIDISSLACKVCFESLTDLDHLIDHLIAKHDAKYDKSITTCLQPYRLIKDNMVCPHCPGEVFRFFGTLLKHMNVKHTNNNIICVYCGQTFRRDQNLRVHIWRHHRAGRFKCNICAAECNIPSRLYMHMARAHGVKAAKCPKCPESFATQYERQKHLIIAHNTGHKCSYCGKLFTRNSFMSNHIRRTHMKEKSIECSVCYTKFFNTVLLKRHMVKHSGQKKYSCDVCGERFYWRKTMKTHRDRLHSKQLYPAPM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00925070;
90% Identity: iTF_00925070;
80% Identity: -