Gspa021236.1
Basic Information
- Insect
- Globia sparganii
- Gene Symbol
- -
- Assembly
- GCA_949316385.1
- Location
- OX438668.1:6826320-6828350[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.5e-07 0.00018 22.2 0.1 15 40 29 53 22 57 0.89
Sequence Information
- Coding Sequence
- ATGCCTAGGAAACGTGTAAGAAAGACTTCAAGAGGTGAAAGCGACTTATTGTTGTACAAAAACGCTTATGAAGAAGTCAAAATAGGAACTTCTTTGAGACGAGCTGCAGAGAAATATGGCATAAACTATGTATCTCTATTGAGATATAAGCGAAAGAGGGATGCTGCAAATAAAGATGACCAAGACCAGGAAGAAACTGTAAGAATGGGATACGTGGCTCACAACAGAGTTTTCACAGATGATCAGGAGCGTCAATTGTCTAAATACTTGATTCGTTGTGCTGACATATATTTTGGGCTCTCCACAAAGGAGGTAAGAAAATTGGCGTTTGAACTTACcatcaaatataatttaaagtcTCCGTCCACATGGATTGAAAATGAAATGGCTGGAGAAGAGTGGTTCCGTTCATTTATGAAAAGAAATCCAGAACTATCAGTGCGCGCTGCACAAGCTACAAGCCTGTCTAGAGCCACTAGTTTCAATCGAACTAATGTCGATGCGTTTTATGACAACCTTCAAATTGTTATGGACAGGGACCACTTCGAACCTCAGGACATTTATAATGTTGACGAAACCGGAGTTACAACTGTACAGAAGCCTGACAGAGTTGTAGCAAGACGTGGCACGAGGCAGGTCGGTGCACTTACCTCTGCTGAACGAGGCAATTTAGTAACACTAGCATTTGCAGCTAACGCATTGGGCAATGCAATTCCGCCAATGTTCGTATTTCCCCGGATTAGATACCAGGAGCATTTTATCAGAGACGGGCCAGTGGGGTCAATTGGTACAGGCAATCCTTCAGGATGGATGCAAGATGAGCAATTTGTTGTGTttcttaaacattttaaaaaacacACGAACGCTTCTCTGTCACATAAGGTGTTACTGGTATTGGATAACCATTCGTCTCATATACACATCCATTCTTTAGACTTTTGCAAAGAGAACGGAATAGTACTCCTATCATTTCCACCCCACTGTTCCCACAAATTGCAGCCACTGGATCGCTCTGTTTATGGGCCTTTCAAAAAAGCGATTAATACTGCCTGTGATGCCTGGATGCGGAATCATCCAGGTAAGACTATGACCATATATGATATACCAAGTATTATAACAATAGCGATGCCAATTGCGCTTACTCAAGCTAATATTCAGGCCGGATTTCGCAAGACAGGGATCTACCCATTCAATCGTGAATTATTCCAAGATATTGATTTCGCACCCTCGTTCGTGACAGACAGGCCAAATCCAAATGCTACCGAGGAAGTGGCCGAATCTAATCTAAATAACATTGGActtggaactgatgatgaaacaCCGCCGCTTTCACCTTCGTTATTAAATGAAAACCAGCCTTTAACTAGCGCAGTAAATCCTGTTGAGGCTGAAAGAAGAGCATCTTCAAACAGCACAGCTCGTCCACCTGAGCGTGAAAATGAAGTCAATGAGATTCAAGCGGCAATAACGCCGCCCAGGCCTTCTCCTGTAGAAACCAATCAAGAGTCTCAAGTTATAATGCCGAACGTGGAACTAAATACCTCTTCTCGTGATGCTACTATACCGCAGGAATCAGAAACTATTCCGTCCACTagcagaaaatctgttttctcgCCAGAAGCATTGCGGCCCTACCCGAAAGCTCCTGCTAGGAAATTAGGAACAAGAGGTAGAAAAACCAAAAAGACTGCAATTTACACAGACACTCCTGAGAAGGAAGCAATAAGAAAAGAATATGAAGAACGACAAAAGCGATTGAAAGCtaaacaaatgaagaaaaatatacttGAACCATCCACCGGGAAGAAAAACAAAGGGAAAGGTAAAGGGAAAAAAAGGAAGGCTAACACATCACCGGATTCATCATCAGAAGAAGAATATTATTGCCTTGTTTGTCTAGAGCCGTATTCAGCGAGTCGATCTGGAGATAGCTGGATACAATGTCAAGGAGGATGTAAATTATGGTCTCACGAAGCTTGTACAGAAGGGAGTAGATATTATGTTTGCCATAATTGCAGCGAGTctgattaa
- Protein Sequence
- MPRKRVRKTSRGESDLLLYKNAYEEVKIGTSLRRAAEKYGINYVSLLRYKRKRDAANKDDQDQEETVRMGYVAHNRVFTDDQERQLSKYLIRCADIYFGLSTKEVRKLAFELTIKYNLKSPSTWIENEMAGEEWFRSFMKRNPELSVRAAQATSLSRATSFNRTNVDAFYDNLQIVMDRDHFEPQDIYNVDETGVTTVQKPDRVVARRGTRQVGALTSAERGNLVTLAFAANALGNAIPPMFVFPRIRYQEHFIRDGPVGSIGTGNPSGWMQDEQFVVFLKHFKKHTNASLSHKVLLVLDNHSSHIHIHSLDFCKENGIVLLSFPPHCSHKLQPLDRSVYGPFKKAINTACDAWMRNHPGKTMTIYDIPSIITIAMPIALTQANIQAGFRKTGIYPFNRELFQDIDFAPSFVTDRPNPNATEEVAESNLNNIGLGTDDETPPLSPSLLNENQPLTSAVNPVEAERRASSNSTARPPERENEVNEIQAAITPPRPSPVETNQESQVIMPNVELNTSSRDATIPQESETIPSTSRKSVFSPEALRPYPKAPARKLGTRGRKTKKTAIYTDTPEKEAIRKEYEERQKRLKAKQMKKNILEPSTGKKNKGKGKGKKRKANTSPDSSSEEEYYCLVCLEPYSASRSGDSWIQCQGGCKLWSHEACTEGSRYYVCHNCSESD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01338699;
- 90% Identity
- iTF_01338699;
- 80% Identity
- iTF_00745635;