Basic Information

Insect: Glaucopsyche alexis
Gene Symbol: RREB1
Assembly: GCA_905404095.1
Location: FR990043.1:29625690-29639355[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.08 8.7 8.1 0.8 2 23 93 115 92 115 0.95

2 12 0.33 36 6.2 0.7 2 22 156 176 155 176 0.94

3 12 0.023 2.5 9.9 0.1 1 23 296 318 296 318 0.97

4 12 0.00029 0.032 15.8 0.2 1 23 327 349 327 349 0.99

5 12 0.00075 0.083 14.5 2.0 1 23 355 378 355 378 0.97

6 12 0.003 0.33 12.6 1.6 1 23 731 754 731 754 0.96

7 12 0.00025 0.028 16.0 1.3 2 23 944 965 943 965 0.97

8 12 0.026 2.8 9.7 5.3 1 23 971 994 971 994 0.97

9 12 0.16 17 7.2 1.3 1 23 1025 1049 1025 1049 0.91

10 12 0.083 9.1 8.1 0.3 1 23 1072 1095 1072 1095 0.95

11 12 0.0019 0.21 13.3 0.2 2 23 1135 1156 1134 1156 0.96

12 12 0.029 3.2 9.5 5.3 1 23 1162 1184 1162 1184 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.08	8.7	8.1	0.8	2	23	93	115	92	115	0.95
2	12	0.33	36	6.2	0.7	2	22	156	176	155	176	0.94
3	12	0.023	2.5	9.9	0.1	1	23	296	318	296	318	0.97
4	12	0.00029	0.032	15.8	0.2	1	23	327	349	327	349	0.99
5	12	0.00075	0.083	14.5	2.0	1	23	355	378	355	378	0.97
6	12	0.003	0.33	12.6	1.6	1	23	731	754	731	754	0.96
7	12	0.00025	0.028	16.0	1.3	2	23	944	965	943	965	0.97
8	12	0.026	2.8	9.7	5.3	1	23	971	994	971	994	0.97
9	12	0.16	17	7.2	1.3	1	23	1025	1049	1025	1049	0.91
10	12	0.083	9.1	8.1	0.3	1	23	1072	1095	1072	1095	0.95
11	12	0.0019	0.21	13.3	0.2	2	23	1135	1156	1134	1156	0.96
12	12	0.029	3.2	9.5	5.3	1	23	1162	1184	1162	1184	0.97

Sequence Information

Coding Sequence: ATGCAGGGAGCCGCGAACGCGCCCGCGCCACCTGCGGCCGAGCCACCCTCAGCACAGCAAATCAAAACAGAAGTCATCATCGAAGCCAAAGTTGAATCCAAAAATCAAGACGAAGATATGAAGAAGGATAATGAAATGAGACCTGTACGAACTAACAGCATCGACAGCGACAATCGCTCGGACAGgagcgatgatgatgattgcaGGAGGAACCGCAAGAGAGCAGCGTCTGCATCACCGACACCCATGCCTTTAGATAAGAGAACTGCTCTCCTAGAATGTTCCAAATGTGTCCAAAGATTCGACTCTAGAAACGCCTTCGAGTTGCACAAGCTTACCTACCATAGAGAAGATGCTAGAACTATTTTCAATGATCTCTCATATCCAACCTTTCCCAGCAAAAAGTACCCAGATATATCGCGAAGTGCATACGAACGTAACACTAATATTACTGAAGATTATTTACGTTGTGTAAATTGTTCGGAAGATTTTAAATCATTACATGTGCTGGAAAGTCACCGAAAAACATGCAATAAAATGAACAGTTCCGAACATGAGAGAAGAGAGGATTTTTTCTCTAAGCTAGATCTCCGAAACAGGTCTTTTGGAATTCCTGGAACTTTAACTCCGCCTATGGAAAAATTTCCTCCAAAATACGATGAGGCTCATGTTACCAACGGCTTAAGACAAATCGATGATCTTGCAGACATTTCGTCAATTTTAAATGTTACTGCAGCCAGCAGCCTTCTCGAAAGATTAACAGGGCGTGGTTCCTTGCACAGCTCTGTTCTTACCCCGCCAGATACTGTAGCTAAAGATCGTGATCAGGAAGAAACTCAAGACAATTTTGCGGCAGAATTTAGACGAATGAAACTGCGTGGAGAGTTCCCGTGTCGCCTTTGCCCGGCTAAGTTTCCCAACCTTAGAGCTTTAAAAGGTCACAACAGAGTTCATTTAAGCGGCACTGGCCCAGGACCATATCAATGTAATATGTGCCCGCAATCTTCATTAGACAAAGCTGCTCTCGTTCGTCATATGAGAACTCACAATGGTGACAGGCCATATGAATGCGCTGTATGCAATTACGCTTTCACTACCAAAGCTAATTGTGAACGCCACTTACGCAACCGCCATGCTAAGGTAACTAGGGAAGATGTGAAAAGGTCTATTATATATCATCCATCTGAAGATCCTAACAATGATGAAATGAATTCGAAAATAGCTAGAGATGAGTTTAAACGGTCTTTACCATTCCACACTCCAGAATCAGAACGATCTATGGAACATACTGGAAGGAGTACTCCATTGGGGCACTACACCCAACCATTTGTTCCCGATAGGCAGCACCCTATTTTATCTTTGACTAAACCTAAAGGATTGCCTGATACACCTATACTACCACCAAAAGAAAGCGAACCACTAATGCCAAAGATTAACGTTGTGAATTTGGGGAAATTAACTCAAATACCTGAGTACAGGGCACCAGCAATACCATATAAAGAAAATGATCCCGCACCGATCGAGACGTATACTGATGATGCTCCGGTCGATTTAAGTACCAACGATAATAGCTGTGATGTACTTGACCTAAGCAAGAAAAAACGAGATGTTGATGATGAACAACCCAAGGTTTCACCTCGAGCTGCTTTCGATAGCTCATCTTCAACTGCAGCATCAGTGGCAGCATCAGCCATAGAGAAAACGAGATTCCTTCTTGCTCAACAACGATTATTTGAAAACTCGATGCCAAAACTTGATACAGCTTATTACGCATCACAGTTATCTCAACTGTATGCGGGCGCTGTACCTGGTTTACCTAGCTTGCCTATGCCTCCATCTTTTCCTCTCAACCCATACTTTCTCCAGCCGTCTTTTTTTCCTCATCCCTCTGATACTCAAGAGCTTGCAGAAATGAAACAGCACATACAAAAAGTTATATTTCGGGGCCTTAGCATGTCCGGTGGTGGGTTGGTAACAAATGAATCTGTACCACAACCTAAGCAAGAACAGGAAGAAGAAGACCAGAAACCTATACACATAGATACATCCTCTACTCCACCTCCTGCTTCGGAATCGCCTCGCCCTCTAAGCAATAGTATGGTTACGCAAAATGATTCCgtaaaaatggtgataaaaaacGGCATTTTGATGCCTAAACAAAAACAAAGACGCTACCGCACAGAGCGGCCCTTCTCCTGCTCTCAGTGCTCGGCAAGATTTACATTACGCTCAAATATGGAAAGACACGTCAAACAACAACATCCTCAACATTGGAGCATCAGAAGACCAACACCACGAGCTCCCCCACCGTATCCCCAAGATAACATCACGGATCGTGTTAAATATGCCTTACTAGCTGGACAGCTGGAACGGCCATTGCAAAACGATCGCTCCCCGCCCAGAAGAGATTCTGATGAAGTCGCTGATAACGAAGAAGACGAAGATGATACTTTAATTATTGATGAAGAACCCGAAGACGGTAAAACGGAAGACCACTTGGCTGCCCGGCAAGCAGCCGCGGAAATACTTTTAGCTACAAGTCGGCTTGAGATGAACAaagattttgatcttaaaattacTGGAAACTTGATCAACAAACCGATTCCAATTCCAAATGAAAAAGTTGATGGCGTCCCAGATTCACTAAATAAGGAAGATACAATGCCTGTAGTGCCTACTCGCAGTgatgaagaagaagatgaagaagGGCTTGTGGCATCGACGAGTGAGGGGAACAATTCGGGAAGCGATGAAAATAAATCTGATTTGGACACTGGAAATCAGCCGCCAAAGAAAAAGTCGGCATACAGTCTCGCTCCGAATCGTGTTTCCTGTCCCTATTGTCACCGCAAGTTCCCTTGGTCCTCGTCCTTACGACGACACGTTCTCACTCACACTGGCCAAAAACCCTTCAAATGCCCCCACTGTCCTCTTCTATTTACTACGAAATCAAATTGTGACCGCCATCTGCTTCGTAAGCATGGCGGATCTGCAAAAGCCATATTGGCCGATCCCGTCAGCGTAGCGTCTGCACCGCAAGGCAGCGAAAGCCGATCGGTCCCGGAACGACCGTACAAATGCGCTTCCTGCCCGACGAGCACATTTTCATCGATGGAAACTTTGAAAAAACACATGTCCTCCCGCCACGGAACCGGCGATTCTCAACCCGGTTCGCCCAACCCTGATACGGAGGAGGCCGATGGAAGCTTAGTCTTCAAATGTCACCTCTGTGAGGCATCTTTTGGAGATAGGACTGGCGCTCTCGAGCATCTGGCCACCTCACATGCTACAGAATACGGCCAACTGGTCAGCAAAGGCGCCCTGGATGCGGCCAGCGATCGCAGTGAAAGCGCAGACGATGATGAAAGAGGGAAATTCCCGGATCACGCCAATAGAAAGGTGGTGTGCGCATTCTGCGTCCGTCGCTTCTGGTCAGCGGAGGACTTGCGTCGCCACATGCGGACTCACAGCGGCGAGAGGCCCTTCGCGTGCGACCTGTGCCGGCGTCGCTTCACCCTCAAGCACAGCATGCTGCGCCACCGCAAGAAGCACCGAGAGGAGGCCACGGACGACGAGGAGGCTTCGTCTCCCATCGTCCAACACGATGACGGTGCAATGAATGGGTTCTGCTACCACAACGAGGACGGCTCCGGGTCGGAGCTGCCGAACGTGAACAACAACAACTCCCCGCCCGCCGCGCCCTACCACAAGAAGCTCAAACTGGACATGACCTCGCGCAAATACTCCACGGAAAACGAGAACGACGCGGAGACCGGCGGCGACCTGATCGGCAAACTCCTCGGCATCCCCGACAAGACCATCATCAACAAGCTCCTGTCCTCCGCGGACGAGGCCGCCAAGTTCCTGGGGGTGAACAAATGA
Protein Sequence: MQGAANAPAPPAAEPPSAQQIKTEVIIEAKVESKNQDEDMKKDNEMRPVRTNSIDSDNRSDRSDDDDCRRNRKRAASASPTPMPLDKRTALLECSKCVQRFDSRNAFELHKLTYHREDARTIFNDLSYPTFPSKKYPDISRSAYERNTNITEDYLRCVNCSEDFKSLHVLESHRKTCNKMNSSEHERREDFFSKLDLRNRSFGIPGTLTPPMEKFPPKYDEAHVTNGLRQIDDLADISSILNVTAASSLLERLTGRGSLHSSVLTPPDTVAKDRDQEETQDNFAAEFRRMKLRGEFPCRLCPAKFPNLRALKGHNRVHLSGTGPGPYQCNMCPQSSLDKAALVRHMRTHNGDRPYECAVCNYAFTTKANCERHLRNRHAKVTREDVKRSIIYHPSEDPNNDEMNSKIARDEFKRSLPFHTPESERSMEHTGRSTPLGHYTQPFVPDRQHPILSLTKPKGLPDTPILPPKESEPLMPKINVVNLGKLTQIPEYRAPAIPYKENDPAPIETYTDDAPVDLSTNDNSCDVLDLSKKKRDVDDEQPKVSPRAAFDSSSSTAASVAASAIEKTRFLLAQQRLFENSMPKLDTAYYASQLSQLYAGAVPGLPSLPMPPSFPLNPYFLQPSFFPHPSDTQELAEMKQHIQKVIFRGLSMSGGGLVTNESVPQPKQEQEEEDQKPIHIDTSSTPPPASESPRPLSNSMVTQNDSVKMVIKNGILMPKQKQRRYRTERPFSCSQCSARFTLRSNMERHVKQQHPQHWSIRRPTPRAPPPYPQDNITDRVKYALLAGQLERPLQNDRSPPRRDSDEVADNEEDEDDTLIIDEEPEDGKTEDHLAARQAAAEILLATSRLEMNKDFDLKITGNLINKPIPIPNEKVDGVPDSLNKEDTMPVVPTRSDEEEDEEGLVASTSEGNNSGSDENKSDLDTGNQPPKKKSAYSLAPNRVSCPYCHRKFPWSSSLRRHVLTHTGQKPFKCPHCPLLFTTKSNCDRHLLRKHGGSAKAILADPVSVASAPQGSESRSVPERPYKCASCPTSTFSSMETLKKHMSSRHGTGDSQPGSPNPDTEEADGSLVFKCHLCEASFGDRTGALEHLATSHATEYGQLVSKGALDAASDRSESADDDERGKFPDHANRKVVCAFCVRRFWSAEDLRRHMRTHSGERPFACDLCRRRFTLKHSMLRHRKKHREEATDDEEASSPIVQHDDGAMNGFCYHNEDGSGSELPNVNNNNSPPAAPYHKKLKLDMTSRKYSTENENDAETGGDLIGKLLGIPDKTIINKLLSSADEAAKFLGVNK*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00406201;
90% Identity: iTF_01178998;
80% Identity: -