Basic Information

Insect: Glaucopsyche alexis
Gene Symbol: -
Assembly: GCA_905404095.1
Location: FR990048.1:25421624-25427576[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.85 93 4.9 3.7 1 23 505 527 505 527 0.95

2 9 2.8e-06 0.00031 22.1 5.7 1 23 575 598 575 598 0.97

3 9 0.0066 0.72 11.5 0.1 2 23 604 625 604 625 0.97

4 9 1e-06 0.00011 23.5 2.7 1 23 631 653 631 653 0.99

5 9 0.00012 0.013 17.1 0.2 1 23 658 680 658 680 0.96

6 9 4.3e-06 0.00047 21.6 3.1 1 23 689 711 689 711 0.99

7 9 3.2e-06 0.00035 22.0 0.5 1 23 717 740 717 740 0.97

8 9 0.069 7.6 8.3 0.4 1 13 746 758 746 769 0.82

9 9 1.7 1.9e+02 3.9 3.8 1 23 777 800 777 800 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.85	93	4.9	3.7	1	23	505	527	505	527	0.95
2	9	2.8e-06	0.00031	22.1	5.7	1	23	575	598	575	598	0.97
3	9	0.0066	0.72	11.5	0.1	2	23	604	625	604	625	0.97
4	9	1e-06	0.00011	23.5	2.7	1	23	631	653	631	653	0.99
5	9	0.00012	0.013	17.1	0.2	1	23	658	680	658	680	0.96
6	9	4.3e-06	0.00047	21.6	3.1	1	23	689	711	689	711	0.99
7	9	3.2e-06	0.00035	22.0	0.5	1	23	717	740	717	740	0.97
8	9	0.069	7.6	8.3	0.4	1	13	746	758	746	769	0.82
9	9	1.7	1.9e+02	3.9	3.8	1	23	777	800	777	800	0.92

Sequence Information

Coding Sequence: atgttacaaaataatgGGCCCTTTGGCCCTAATGAAGTAAACAGCCAAGCGAATGTGAACGATATGAGTGGACAAATGAGTATCGGAAACAGTATTATAAATAATCTAAACAAAATATCTCAACCATTGCCTCATCCGGCGAATGTACCCTTTCACTTACCAGACTATGTCAATTACGGACTAAACGTGAACTCGACCTTAAATCCATTTCACAATTTCCACCAGGTCAGCTATCAACAGAATTTGATGTCGCAAAATACCTTACAGGAATCTTGGCAGCAGCATCAATTGCCTATGAACCTTAACACTCAAAATGATCCTTCTACTCACGGgtattatgataaaaaaattgaatCTCAAAGTGATTTTTCACATAGTTACAGTAGAAATATGCTAAACATTCCTCAAGTGTATCCAAAACAATATAAACAAATCGGAATGGAGAGTTACCCACATTACAACCATGGAATTAATAGTTTTAACCAATATTTTGATCATAATTTGGATTTGAGACTAAAGCCACCGAAAGAGCATCAAACAAGGCAGTATCCCAATGTTTCACAAGAGGTTCAAAGGTTTGAAAAGCCAACAGAAGACTTACAGCAAGTAGATTTGCGTACTAAAGTGCAAAGGCCATGCGAAGAATTGCCTAGAAAAGCTTATGCATCAAGGAATTGTATAACAACACAGCCCTTTAACCACGGTAACTTGGATTTAAGTTTCAAGCAGCACTGCAGTAACAGCATATCAGAAAAATCAGATAATGTTATAGAAAATTGTCACTTCAATAATGTGTCTAATACAAACACAGAGAAAAATATCTCCTACACAGATCAAAATTTGGACCTATCTACAAAATATCAGAAACCTGAACAAAATTCTATTGAAGGTACTGAAAAACTGCCATTGGATCAAGTGAGACGTAGGCATCTTGCAAATACTGTTAAAATGATAGAAGATATTTTAAATCAGACAACCATAGCTCGGCAGAAGGAAATAGAAGGGCAACAATCTGAAGCAAATTTGAACAATGATGATAATGAGAAAATAGCTCTAAACACAAGCATGAGTGTAGAGGATGATGataaaattgataataattCCAGGGCAAGTGATAAGAGCTATGATGATTCCAATTCAAAAATTGAACAAATATTTCGAAGTGATGAAGATGTAAGTAATGACAGTACATGTGAGAGTGTGGCAAGTCAGAAGAAAGACACAACAAACAGTGAGAGAAGTCACGAGAATGAATCATTGACCATAAAGCAGGAACTTCCAACGGAAAGTGATGGTTCGGAAGATTCTGATGATGAGTTGAAGGATAAAGATGTTATTGAAAACATGGAGATATATCCCGATTTAGACATACACTACATCAACCCATTCCATAGAGATATCTTCGGTATTCAAAAAGATGACATACAAGATTGTAAAGTACACGATTTAGAACAGTGTGTAAACAATGCTAAGGAAGCAATAAAAAATGGTAACTTTTCTAATCTGGAGTATTTTGAATGCatctattgtaatttatgttttaatcatCCAAAACGTTACCTAATCCATGTTAAATGGCATTCCTTTGGATTGACAAATGAAAAGAGAGAGGAGATGCAGAAAGCCAAAGAGATGAGAAAGCAGCTTCAGAGGGAGGCCCGAGTTTtagaaagaataaaaaaagatgAAGTAACTGACACAGAGAGTGCTGAgggaaataaatataattgcaAAGACTGTGataaagttttttgtaaaaAGTCCAGTTTGAAAAATCACCAACAGAGatATCATCCAAATAAGCATCGGGAATGTAAAATTTGTGGCCAGGTGTTAGTTGGATGGATTGCCCTCAGAGATCACCACCTCACACATGTGGGGGAGTCCGGTTACCAATGTCCTGACTGCCCAAAGAGATTTAAGTACTCACACTCGTTGGCTAAACATCGGGACACTCACCTGgaaaaaactCATGCCTGTCCCCAATGCCCGAAAATGTTTGGCTCTGCAGCTCTTTTAAATGTACACAGTAAGACACACGAGAGGATGCTGCGTGGAGCCACATTTAGGTGTACATATTGTGGCAAGGGTTTCTTTGAATCTTACCATTTACAGGCCCACGAGAGGACTCACCGTAACGAGAGACCTTTTGTATGTGAAATCTGCAAAACTTCATTTGGAACCAACTCCGGTCTCAAAAGACATTTGAAagttagTCACAGTACATCTAAACCATTTGAGTGTACAATATGTCATCGGTCATTTATTTCTGAAGCGATCAGGGACAGGCATGAAATGCGTAACCATGGCAACCCGGAAGACTTTAAGTTCCTCTGCAAGCAATGCCCCTGTAGGTATTTGAAGCAGAAAGACCTCAGAAAACATGTTTACAAAGTGCACCCAAAAGGGAAAAGAAAGAAGAAATCTCAGTCTGAAAGTGAGTAA
Protein Sequence: MLQNNGPFGPNEVNSQANVNDMSGQMSIGNSIINNLNKISQPLPHPANVPFHLPDYVNYGLNVNSTLNPFHNFHQVSYQQNLMSQNTLQESWQQHQLPMNLNTQNDPSTHGYYDKKIESQSDFSHSYSRNMLNIPQVYPKQYKQIGMESYPHYNHGINSFNQYFDHNLDLRLKPPKEHQTRQYPNVSQEVQRFEKPTEDLQQVDLRTKVQRPCEELPRKAYASRNCITTQPFNHGNLDLSFKQHCSNSISEKSDNVIENCHFNNVSNTNTEKNISYTDQNLDLSTKYQKPEQNSIEGTEKLPLDQVRRRHLANTVKMIEDILNQTTIARQKEIEGQQSEANLNNDDNEKIALNTSMSVEDDDKIDNNSRASDKSYDDSNSKIEQIFRSDEDVSNDSTCESVASQKKDTTNSERSHENESLTIKQELPTESDGSEDSDDELKDKDVIENMEIYPDLDIHYINPFHRDIFGIQKDDIQDCKVHDLEQCVNNAKEAIKNGNFSNLEYFECIYCNLCFNHPKRYLIHVKWHSFGLTNEKREEMQKAKEMRKQLQREARVLERIKKDEVTDTESAEGNKYNCKDCDKVFCKKSSLKNHQQRYHPNKHRECKICGQVLVGWIALRDHHLTHVGESGYQCPDCPKRFKYSHSLAKHRDTHLEKTHACPQCPKMFGSAALLNVHSKTHERMLRGATFRCTYCGKGFFESYHLQAHERTHRNERPFVCEICKTSFGTNSGLKRHLKVSHSTSKPFECTICHRSFISEAIRDRHEMRNHGNPEDFKFLCKQCPCRYLKQKDLRKHVYKVHPKGKRKKKSQSESE*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00289072;
90% Identity: iTF_01178940;
80% Identity: -