Basic Information

Insect: Glaucopsyche alexis
Gene Symbol: -
Assembly: GCA_905404095.1
Location: FR990063.1:2262296-2305917[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.038 4.1 9.2 0.5 1 23 466 488 466 488 0.93

2 11 1.7e-05 0.0018 19.7 1.6 1 23 502 524 502 524 0.99

3 11 0.00017 0.019 16.5 2.8 1 23 530 552 530 552 0.97

4 11 2.3e-05 0.0026 19.3 3.5 1 23 668 690 668 690 0.99

5 11 2.6e-05 0.0028 19.1 0.2 1 23 696 718 696 718 0.93

6 11 3.7e-07 4.1e-05 24.9 0.1 1 23 724 746 724 746 0.98

7 11 2.7e-05 0.0029 19.1 2.4 1 23 752 775 752 775 0.96

8 11 0.00097 0.11 14.2 1.3 1 23 781 804 781 804 0.93

9 11 7.6e-05 0.0083 17.6 0.4 2 23 811 832 810 832 0.96

10 11 3.8e-05 0.0042 18.6 1.8 1 23 838 860 838 860 0.97

11 11 0.00047 0.052 15.1 0.3 1 22 866 887 866 890 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.038	4.1	9.2	0.5	1	23	466	488	466	488	0.93
2	11	1.7e-05	0.0018	19.7	1.6	1	23	502	524	502	524	0.99
3	11	0.00017	0.019	16.5	2.8	1	23	530	552	530	552	0.97
4	11	2.3e-05	0.0026	19.3	3.5	1	23	668	690	668	690	0.99
5	11	2.6e-05	0.0028	19.1	0.2	1	23	696	718	696	718	0.93
6	11	3.7e-07	4.1e-05	24.9	0.1	1	23	724	746	724	746	0.98
7	11	2.7e-05	0.0029	19.1	2.4	1	23	752	775	752	775	0.96
8	11	0.00097	0.11	14.2	1.3	1	23	781	804	781	804	0.93
9	11	7.6e-05	0.0083	17.6	0.4	2	23	811	832	810	832	0.96
10	11	3.8e-05	0.0042	18.6	1.8	1	23	838	860	838	860	0.97
11	11	0.00047	0.052	15.1	0.3	1	22	866	887	866	890	0.92

Sequence Information

Coding Sequence: ATGAATTGGACAGGACAATGTTTCGTATGCAACCAAACTGCGTATGTTATGAAGGGGGGAGCAGAAATATTTAACAATAAGaaaGCCCTAAAATCTGGCAAAGAGCTATCTGCAATAATCAGTGACCTCGTACAGAAGCCGGTTACAAAGGGTTTGACACATTCCAACGTGCTGTGCAGCAAATGCAGCAAGATGGTGGTGGAATATGATATGCTTGTTGTCAGATGTCAAAAAATCGAACGCGACGTGATGGAGTTGTTCAAACATACACTCGAAAAGTGGGAATTGGATTACGACGATTACGCCAGCACGGATGTGGTGAACGCGGAGAACGTGCAGGTGGTGGAACAACCCGTTATCATTACTCGTGCCAAACAGGCCAACAACAGAGACGTGTTGAAGgtgAAACAGGTTGATCCGAAGAAGGTCGTCTTGTCAGCGTCCAAGTTGCAGCCGCTGCCAGCGAATTTTGTACTCAAACCTAATATTGTGCCTGATGTAAGGAAGAAGATAAATTTTCCGATCGTTACCAAGTTGAAGCCTATATCCATAGACAGCACAAAACAAGCACAAAGCAAATTTGCCATAGAAAAcgataatatcaataaaattgGCACCAGAACCGATAGTGACTCAGAAGAAACACCAGACGGTCAGGAGAAAAGTGAGCTGTCTTCACTATTGAAATTCAACGATTCAACGAATATGCATAATTATTCGTTAAGCGCTTACAGTAAAGAGAGGAATGTTAAGTCGGAGAATCCGCTGAGTGATAGCGAGAACGCTGATGCTGATGAGAATCCTATGGAGATTGATGAAGACTGTACACTAACAGAAACCAATTTAGAGACCAACATACTCGGTATGGAGCAAACGGACGGGTTCGTGCGTCTCGTCTCGTCCGAAGACATCGTGAAGTTCCGATTGGAGGACAGGAGTGATGATGACGGGGAGGGGCAGACAATAGTGATGGACGAAAATGGATCCATACTCCGGGTGGTGTCCGGCCAACGGTTCATGATTGGTGACCAGGAGATATCGCTGGTGATTCCCGATGCTGCGGAGGTGGGAGACAGCCAGGATTCAAACGACGAGTCGCACATCGAGCTACAGGTGTCCGGGGACGAGGAGACGGCGAACGCCATCATAGCAGCCGCGCAGGAGAAAGgGGGTGCGTTCATCAAGGTGGAATCGGGTGAAATGTTTCGCGTCGAGTCGGTCGAGAGTAAAGAAGATAGCGACGACGGCGCAGACACACAGTTCCAGGTGGAGAAGAAAGCCGATGGAGTGTTTAGGTGCAAGTTCTGCGAGCGTTACATGAGCGcagACAAGGTGTTCGAAGGTGACGCGTCATCTATGATGTCCCATCTTAAGAGTATGCACGACGCGCGCCTGTACATATGTATCGTGTGCGGGAAGTTCATACGACGCAAGTCCGAGTATGGGAAGCATTTGAGCAGCCACAGCTCGGGCGAGACCGCGATCCTCGACAAGGGCAAATCTTACGAGTGCAACGAATGCCACAAAAAATACTCGTCGCGAGTTCTACTAGCGGAACATCTAAACACGCACGTCGGGGCGCGGCCGTATGTCTGCAGCGAGTGCGGCAAGGACTTCGCCAACAAGTACACGTACCAGGCGCACTGCAAGACGCACACGatAGAGCTACCGATCTCGGTgccgaagaaaaagaaatacaaATGTTATTTCGGGTGCAAGGTAGAAGGACCGCTCCATCAATTTCCGAAAGTGGATACTGTAAGATTTGCGGCGTGGAAAGCTGTTTTGGATGTGGAAGCTCGAAAAAAGAGCGACGCATACATATTCAAGAAGTACAAACTTTGTAACAGACATTTTGACAAATATTACGTCAATCCGCCCGGAAAGATACTGACAAGAAATGCGATTCCAACATTGTTCTTGGGAGatAATAATGAAGCAAAGGATCCACTTTCCACGTCCAGAGAAGATGGTCGTACAGAAGATAACCGCCCTCGTCCGTTCAAGTGTAATCAGTGCGAGAAATCGTTCTTCACGCAACAGAACCTGTCGCAGCATGAGAAAACACATTCGGGGATCAAAGATTTTATATGCAAGATTTGTGACAAGGCGTTCGGCACCCAGCACAATCTCGAGGTACACGGCGTCGTCCACTCGCGCCGCAAGCCATTCTCGTGCGACGACTGCGGCAAGGCGTTCGCGCGCCGTGCTGAGCTGCGCGACCACGTGCGCATACACACGGGCGAACGACCGTTCGAGTGTGAGATCTGCCACGCCCGCTTTACGCAGCGCTCGAACCTGTACTCCCACCGGCGCGCCACGCACACGGACGACAAGCGGCACGCGTGCGACCGCTGCCCCAAGCGGTTCAAGCGCAAGCGTCTCCTCGACTACCACATCCAAGCGGCCCACACGGGCGAGCGGCCGCTCACGTGCTCGGTCTGCGGCGCCAAGTTCGTCTACCCGGAGCATTACAAGAAGCACATTCTGATACACAGCGGCACCAAGCCCTACAAGTGCGAGatatgCGACAAGTCGTTTAACTCGCGCGACAACCGCAACATGCACCGGTTCGTGCACAGCGACCGCAAGGCGTACGAGTGTCTCGTCTGCGGCGCCAGCTTCATGCGCAAGAACCTGCTCTACAACCACATGAACCAGCGGGGTCACATGGCAGAATCCATCGTCATCAATCAGCCCCGGATCGCCGTCAAAACTGAAtatCAAAATTCGAAGGACGACAATAACATGGAAGCAACAGAAAGCATTTACGAGCAAACTGAGGAAGCGGCCGAACGTACACCCGAGAATGTGATAGATAAAACTATTAATATAAGGCAGGACGGCGGGACCACTCTGTTGGCAATACaTAACGCGGAGGTTGAATTAAAATCGGACGATGGTCTGCTGCAGACTTTTGCCGTGGAGCCACTCGATCAGTCCATGCTGTCTGATAACGTGTTGGTGTCTGCGGAGGGCGAGCAGCGTCCGATGATGCGGCTAGTGCAGTTGCAGCTGCGCAACGGGAACAGCAAGTGGGTGGCCGTCGACGGGTAA
Protein Sequence: MNWTGQCFVCNQTAYVMKGGAEIFNNKKALKSGKELSAIISDLVQKPVTKGLTHSNVLCSKCSKMVVEYDMLVVRCQKIERDVMELFKHTLEKWELDYDDYASTDVVNAENVQVVEQPVIITRAKQANNRDVLKVKQVDPKKVVLSASKLQPLPANFVLKPNIVPDVRKKINFPIVTKLKPISIDSTKQAQSKFAIENDNINKIGTRTDSDSEETPDGQEKSELSSLLKFNDSTNMHNYSLSAYSKERNVKSENPLSDSENADADENPMEIDEDCTLTETNLETNILGMEQTDGFVRLVSSEDIVKFRLEDRSDDDGEGQTIVMDENGSILRVVSGQRFMIGDQEISLVIPDAAEVGDSQDSNDESHIELQVSGDEETANAIIAAAQEKGGAFIKVESGEMFRVESVESKEDSDDGADTQFQVEKKADGVFRCKFCERYMSADKVFEGDASSMMSHLKSMHDARLYICIVCGKFIRRKSEYGKHLSSHSSGETAILDKGKSYECNECHKKYSSRVLLAEHLNTHVGARPYVCSECGKDFANKYTYQAHCKTHTIELPISVPKKKKYKCYFGCKVEGPLHQFPKVDTVRFAAWKAVLDVEARKKSDAYIFKKYKLCNRHFDKYYVNPPGKILTRNAIPTLFLGDNNEAKDPLSTSREDGRTEDNRPRPFKCNQCEKSFFTQQNLSQHEKTHSGIKDFICKICDKAFGTQHNLEVHGVVHSRRKPFSCDDCGKAFARRAELRDHVRIHTGERPFECEICHARFTQRSNLYSHRRATHTDDKRHACDRCPKRFKRKRLLDYHIQAAHTGERPLTCSVCGAKFVYPEHYKKHILIHSGTKPYKCEICDKSFNSRDNRNMHRFVHSDRKAYECLVCGASFMRKNLLYNHMNQRGHMAESIVINQPRIAVKTEYQNSKDDNNMEATESIYEQTEEAAERTPENVIDKTINIRQDGGTTLLAIHNAEVELKSDDGLLQTFAVEPLDQSMLSDNVLVSAEGEQRPMMRLVQLQLRNGNSKWVAVDG*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -