Basic Information

Gene Symbol
ZNF131
Assembly
GCA_905404095.1
Location
FR990042.1:8882925-8894657[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 12 0.015 1.6 10.4 2.8 2 23 83 104 82 104 0.97
2 12 6.5 7.1e+02 2.1 3.1 3 21 112 130 110 134 0.88
3 12 0.00076 0.084 14.5 0.2 2 23 176 198 175 198 0.95
4 12 0.0056 0.62 11.8 0.2 2 21 204 223 204 224 0.91
5 12 8.9e-05 0.0098 17.4 0.5 1 23 232 255 232 255 0.95
6 12 1.7e-05 0.0019 19.7 0.1 2 23 273 294 272 294 0.95
7 12 1.2e-07 1.3e-05 26.4 2.2 1 23 300 323 300 323 0.98
8 12 8e-08 8.8e-06 27.0 0.8 3 23 335 355 334 355 0.98
9 12 1.7e-07 1.9e-05 26.0 1.1 1 23 361 383 361 383 0.99
10 12 3.2e-06 0.00035 22.0 1.6 2 23 390 411 389 411 0.96
11 12 1.5e-08 1.6e-06 29.3 0.6 1 23 417 439 417 439 0.99
12 12 0.01 1.1 10.9 0.3 1 23 445 467 445 467 0.97

Sequence Information

Coding Sequence
ATGGTGTGGGGAGGAATTTCTCTATTAGGTAGAACTGAGCTGGTAATCCTCAAAGAAGGCACGGTAACTGCTCAACGATATATCGAACAGGTCATAAGACACCATGTGGTGCAATATGCACAGAGAATTGGTGCAAGTTTCAAGTTGATGCACGACAATGCCCGTGCTCATACAGAGCCACTAGACAAGCTCTACAAGAAGCTGGCAATCCTTAAGAAGCTATCAGAAAATGGTATGTCATTATCGACATGTGAATTCTGTAAGATGGATTACAAAACCAAAGAGAAGTTAGACTCACATATGCATGTACATAAAGACACTCTAGTTACAAACTGCTTAGTGTGTAAGAAGGTGTATCTATCCAAAGCATATTACCAACAACACAAATGTCAGAGGAATCATAtagataaattacaaaatgCAGAACCTCCAGATCCTAATGTTACGCCAGATAGATCTGCACAAGTTTTGCTCGCTGAAATCGTTAAGTCAAGTGATGCGGAGGAGTCCATAGAGTCGGTGAAGGTGTGCGAGGCGTGCGGCCGGGTGTGCGCCACGCCGGCcgagctgcagcagcaccgcgACACAGACCACCCCGAGCTGTCCGCCAGCTGCCAGATATGCGACAAGACTTTCGCTTCAGTGAAGACCGCTGAGCGCCATCGTATAACCTGTCAGCGAGTAGAACGCAAATTCATCTGCAATACTTGCGGACGACGATTCGCCTTCGAGATATCTCTCAACaagCACATACTGCAAAGCCACGCGGGGCAGCGAGTGTCGGTGGACTTCATGAGCCGGCAGAAGCGACAGGTGACCTGTGATTTGTGTGGCAAGGCCTTCCCCAGTAAAGAACAACTTGTTCGCCACAGCATCGTTCACAAAACACCGAAGAAATACGAGTGTGACAAATGCAAGAAGAAGTTCACTAGGAAAGGGaatttaaaAACCCATATAATGCGTGTACACGAATCAGGTCGCAGCAGCAAAGGCAGTGGACTATGTCTGTACTGTGGCCGAAGTTTCAACAACTCCTCCAATCTCATAGTGCATATGCGCAGACATACGGGCGAAAAACCTTACCAGTGCGATTTCTGTGGGAAAGGATTTCCTCGATCTTCAGATCTGCAGTATCACAGACGTTCACATACGGGAGAGAAACCATGTAAATGCGGCGTGTGTGGAAAAGGTTTCACGGGCAGCAACAAACTGTCGCGGCACATGCGCGTGCACACGGGCGCGCGGCCTTACAAGTGTCCGTACTGCGACAAGGCGTTCTCGCAGAGCAACGACCTCACCGTGCACGTGCGCCGCCACACCGGCGACAAGCCCTACGCCTGCGAGGTCTGCGGCGACCGGTTCATCCAGGGTACAGCGCTCCACAATCATCGTCGAGCGCACGGCCACTACCCGGCGACGCAGCCCGTCACATACACGGTACAGAGTATAACGCAGACACACTGA
Protein Sequence
MVWGGISLLGRTELVILKEGTVTAQRYIEQVIRHHVVQYAQRIGASFKLMHDNARAHTEPLDKLYKKLAILKKLSENGMSLSTCEFCKMDYKTKEKLDSHMHVHKDTLVTNCLVCKKVYLSKAYYQQHKCQRNHIDKLQNAEPPDPNVTPDRSAQVLLAEIVKSSDAEESIESVKVCEACGRVCATPAELQQHRDTDHPELSASCQICDKTFASVKTAERHRITCQRVERKFICNTCGRRFAFEISLNKHILQSHAGQRVSVDFMSRQKRQVTCDLCGKAFPSKEQLVRHSIVHKTPKKYECDKCKKKFTRKGNLKTHIMRVHESGRSSKGSGLCLYCGRSFNNSSNLIVHMRRHTGEKPYQCDFCGKGFPRSSDLQYHRRSHTGEKPCKCGVCGKGFTGSNKLSRHMRVHTGARPYKCPYCDKAFSQSNDLTVHVRRHTGDKPYACEVCGDRFIQGTALHNHRRAHGHYPATQPVTYTVQSITQTH*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
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