Basic Information

Gene Symbol
-
Assembly
GCA_905404095.1
Location
FR990061.1:15519344-15523789[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 6 2.5 4e+03 -0.8 0.1 22 31 235 251 222 258 0.72
2 6 1.8 3e+03 -0.4 0.0 23 41 354 371 349 375 0.89
3 6 0.075 1.2e+02 4.0 0.2 27 44 457 473 451 475 0.83
4 6 0.044 72 4.8 0.1 23 46 589 611 566 611 0.84
5 6 0.21 3.3e+02 2.6 0.1 4 45 663 713 661 714 0.65
6 6 3.8e-05 0.062 14.6 0.4 17 40 834 859 815 865 0.76

Sequence Information

Coding Sequence
ATGGAACAAATAGTGGTTCAAACCGAAGTGCAGCCCGATggaaatattttgttattttacgtTGATGAAAACCAAGAGATTGATCCAAGCTTACTAGAACAGGTTGAAGATGAAAGCATTGAAGCGCAACCTGGAACAAAATACATAATAGAAGATACTGGAGGAGATTCAGAGGATGAACTGAATATTGCACAAGCTACTGAACAAGTTCTACAAGAACAGTGGCCAGATAATGAAATAGCACGTCTCATTGTATTCTATACCGACAACAAAAAAACATTTCTGAATGGAACAACTAAAAGTAAACACTTGTGGTCTGTTGCTTGCAAAACGATGCTCACACACAGAAATCCAGTCTCCTGTGAGATTAAATTCAGAATGTTAAAAAGTAAATACATCCAAGTATATTTAGAAAAACAAAAGGATAGCAATTACCATTGGTCATTCTATGATCTTTGCCATCAAGCTTTTTACGATGACCCAGATGTGGTGTCTTATTTGAATGAGAGTTTACAAGTAGATGAGAGTTTACAAGTTGGTGAGAGTTCACAGGAGCAAGAAGAACCGGAGACCAAGGTTCCTGCAACTCAAATTGTAAATGAGGATGGAGTAATTATTGTAAAGAAAGTTAGCAACCATCCATGCGATGAGAAGGTGAAAGCAATGTTGAGATTGTACATACAACATAAGGGTAAGCTGAATAATGCAAATCTCCctaaaaatatatgggatacaATTGCATTAGAAATGGGTGAGGAAGATGGAAATTATTGGCACCGACGTTTCTATAATTTCAAAAAGCATTACATTACTATGCTTCTTAAGAAAAAAGAGACCAACGAAGAAATTAACTGGCCCTACATGAGTCTTTTTGATGAAATATTTGGTAACGACAAAGACTTTCAGCGTAAATTCCAAATAAATGATAATGAAATTGAAGTGGATGTAGATAATTCAGTACGAAATATATGGTATgatacacaaaaaatatttttagtgaaGTATCGTTTTGACTGTTTTCATGAATTCCAAGACCCAACGATACCGGATGCCTTTCTATGGCATGAGGTTGGAAGACTTCTAGATAAAGAGCCCGAAAGCTGCAAAAAGAAACTTGAAGACTTACAAGAGGAGCATCTAAAGTACTTATTAACTGAGAGCTATGATTTGTCAAATCGCAGGCCTTTACAAATATTGTTGGATAATGTTATAGCGTTGGAAATTGAACCTACTCTTACAAAAGGTAATATAACATCCGTAAACGACACATGGAAAACGGAAGAAATAGATGAGATGGTCCAATATTTGTATGATAATATGGAAATGTTTAAAGACTCTGTCTGTTATTACGTATGTTGGGTAGTTGCTGCCAAGAAGTTGGACAAAACGGTTTTATCGTGCAAGAAAAAATGGAACGAACTAACAAAACTATACAGATCAATTTTAAGTGACAAAAAAGAAAATCCTGACATGCAGATCGATTGGAgatatatttatgtttttgatataaTCTTTGACTACGGAATGGATTTAAAGTTGCTTGATGGGTACGAAACAAGTGGTGATTCAAACAAAGCACCCAAACCTGatgTGAATAAAATTACTTTCAATAATAATTCTGAAGATGAGGAAACTTATGATGAAAGAGGTTTTATGAAAAGCAAAAAGGAGCAAGCAGGAGATGAGAAGGCTTTCAAACTACTGGAATATTATCTCAagaataaagaaaaattttcatcGTCACAACAGAAGAAACTAGCGTTATGGGAAGTTATAGGAAAACAAATTGGTGTATCAGCCGCAGAATGTGCGCATCGATTTAGAAACTTGAAACAAGTGTACACAGCTTACGTTCAAAGGGAAGTAAACAAACCAGAGATGCCTATTCTATGGCCATACTATACTCTATGTAAAAAAGTTTTTGGGTACAGAGCAATAAAGTCAAAACTAAAAAGTGGTAAAACAGACGCCGATGAGATCGAAGACTGGGCACCGAAGGAAATCAAACAAGTCATTAATCATTTCTCTACTTTCTATAATGAAATTACAGAAAATTCACATAATGAATCCCTCTGGTTGAGTCTAGCCGAACAAATGGGTAGGTCAGCCATAAGCCTTAGAGACAAGTTTTTGGAGTTAAGAAAGTCTTACAGAAAATTGAAGACAATGAAAACTCGTAACCCTGATGTGAAATTGACATGGAAATACTTTACTATGATggacaatatttataatgaagCTGACCAGATTAGGAGTAGGGAAAAAGTGGAAATTGATATTCCTCAAAGTTTCGATGTTATTGGGAAAACAGAATTACCTGATGATGATGACTATCATTGCATTATTGTGATGCCAGAAGACGAAGAAATAGTCTATAATGAAACTGTTATAGAAGACAACCCTCAAATAATACCTAAATTAGAAATACAGCCTAGAATGTTTAAATGGAATAAAAGCAGTAAGAAGCAACTTTTGCGCCTATATTTAGAGTGCCTAAAAAGAAATGTGGGATCGAAAGAAATATGGAATGAAATAGCGTCTAAAATGGACGACAAAACTCCCAAAGCTTGTAGAAATATGCTTACGAAACTAAAGAGGAATCACAAAAATCAAGGAAATACTGTGTCATACGGTAAATTGTTAGACAAAATATTGGCAATGAAAAAGGTAAAACTTAAAGTTGTTTGA
Protein Sequence
MEQIVVQTEVQPDGNILLFYVDENQEIDPSLLEQVEDESIEAQPGTKYIIEDTGGDSEDELNIAQATEQVLQEQWPDNEIARLIVFYTDNKKTFLNGTTKSKHLWSVACKTMLTHRNPVSCEIKFRMLKSKYIQVYLEKQKDSNYHWSFYDLCHQAFYDDPDVVSYLNESLQVDESLQVGESSQEQEEPETKVPATQIVNEDGVIIVKKVSNHPCDEKVKAMLRLYIQHKGKLNNANLPKNIWDTIALEMGEEDGNYWHRRFYNFKKHYITMLLKKKETNEEINWPYMSLFDEIFGNDKDFQRKFQINDNEIEVDVDNSVRNIWYDTQKIFLVKYRFDCFHEFQDPTIPDAFLWHEVGRLLDKEPESCKKKLEDLQEEHLKYLLTESYDLSNRRPLQILLDNVIALEIEPTLTKGNITSVNDTWKTEEIDEMVQYLYDNMEMFKDSVCYYVCWVVAAKKLDKTVLSCKKKWNELTKLYRSILSDKKENPDMQIDWRYIYVFDIIFDYGMDLKLLDGYETSGDSNKAPKPDVNKITFNNNSEDEETYDERGFMKSKKEQAGDEKAFKLLEYYLKNKEKFSSSQQKKLALWEVIGKQIGVSAAECAHRFRNLKQVYTAYVQREVNKPEMPILWPYYTLCKKVFGYRAIKSKLKSGKTDADEIEDWAPKEIKQVINHFSTFYNEITENSHNESLWLSLAEQMGRSAISLRDKFLELRKSYRKLKTMKTRNPDVKLTWKYFTMMDNIYNEADQIRSREKVEIDIPQSFDVIGKTELPDDDDYHCIIVMPEDEEIVYNETVIEDNPQIIPKLEIQPRMFKWNKSSKKQLLRLYLECLKRNVGSKEIWNEIASKMDDKTPKACRNMLTKLKRNHKNQGNTVSYGKLLDKILAMKKVKLKVV*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01178520;
90% Identity
iTF_01178520;
80% Identity
-