Gale010646.2
Basic Information
- Insect
- Glaucopsyche alexis
- Gene Symbol
- ct
- Assembly
- GCA_905404095.1
- Location
- FR990046.1:15136582-15165561[+]
Transcription Factor Domain
- TF Family
- CUT
- Domain
- Homeobox|CUT
- PFAM
- PF02376
- TF Group
- Helix-turn-helix
- Description
- The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 5.4e-27 7.3e-23 81.5 0.0 3 70 222 290 220 296 0.94 2 3 4.3e-32 5.8e-28 97.9 0.0 4 77 623 697 621 699 0.96 3 3 7.8e-31 1.1e-26 93.8 0.0 3 75 826 899 824 903 0.95
Sequence Information
- Coding Sequence
- ATGTCAACTTTGACTATTTCTACTGTTCAATGTAAATCGCTGAAGCCTGTAACTTGGACCGCGACAGAGTCGGTCACCATAGCTCAATTAGTAGAAGACGTGCGGAGACTACAAGCCTCACTATCGGCGCTGCAGGAGGCCCATGCTCAGCAGCTGCAGCGGCTAGAGGAGAGGTTGGACGAGAAGAAACAGCACATAGCACGCTTAGAAGCCCGCCTCGACACACAGAGGGACTACGACGAAATCAAGCGAGAAATTAGTTTACTAAGGTCTATGGACTTGGGGCCGAACGACAGGGATCGTAAACCAGAACCCATTCGGTCACCTTCCGCGCCCTcccttcgagaagagagagacTCCGCCGAACGCGAGCGAAGCACAGAGAGGCGAGACCCAGGTGGCGAGGAATGGGCGAGCACGCCGCCTCCCCTTAACAACAACACGACGCACCACAATAACAACGGCCCGCTGCCCTTGCCGCTTCCGCCGCCGAGTCCCTACCGCTTTGAGGAGCACAGGCCCTACAGATTCGCCGAAGACATGGGACCCCTCCCGCCCGGCGCTCTCGTCGGACGACTAGGGGATTCCCTCATCCCCAAAGGAGATCCCATGGAAGCACGCTTGCAGGAGATGCTCAGATACAATATGGACAAATATGCCAATTCAAACCTGGATACGTTGCACATAAGCCGACGGGTTCGCGAGCTGCTCTCGGTGCATAACATTGGACAGAGGCTGTTCGCTAAATATGTGCTCGGTTTATCCCAAGGAACGGTATCAGAATTACTGTCTAAACCCAAGCCTTGGGACAAGTTAACAGAGAAGGGTCGGGATTCGTATCGCAAGATGCACGCGTGGGCATGCGACGAGGCCGCCATCATGCTACTGAAGTCACTAATTCCAAAGAAAGTTGGGACAAAAGATGGTACTGCCGGCGCCGGTTTCGGAAGATCAGAAAGTGATGGAGACGAGCGTTTGGCTCACATGCTGAATGAAGCCTCTCATATCATGAAAACCCCAACTTTACAAAGCAACAACGACGACTCCAGGAGTAATGATGACTCGAGTTCACCTCGAACCCAATGTCCGTCGCCGTTCTCCAATAAGGACTCAAGTCAAAACAGAAGGCTGAAGAAGTATGAAAACGATGACATTCCACAAGAAAAAGTTGTCCGCATTTATCAAGAGGAGCTCGCCAAAATCATGACGAGGAGAGTAGAAGATATGCGACACAGCCGAGACGGTTTCCCAGGCATGTTTCCTCCTTTTTTCAGTGGCGGCATGCCCCCTCACATGGAAAGGCCTCCTGAGGATATTCGGATGGCATTAGAAGCATATCATCGAGAACTAGCGAAAATTCAACCCGGCGGCAACATTCCAAATCTACATAACTTGCCCGGAATGCCACCGTTTCCTAATCTCCTTGCACTGCAGCAGCAAGCCATGCAAGCACAAAACCAACATATGAACGGATCAGGAGCTGTACAAGATCTTTCTCTTCCCAAAGAAAAGAGTAGTAAAGTAAATGGAATAACTGACAATGATAAGGAGAGGCAAATGGACGCTGAAGAAGCTATCAGACATGCTGGAAGTGCATTTTCATTGGTGAGGCCGAAACTCGAGCCAGGACAGCAATCCACAGGCTCGTCAGCATCCAGCCCCTTGGGAAATGCTATTTTACCTCCAGCTATAACACCGAATGATGAATTCACTAGTTCGGCTGTAGCTAGCCCATTACAAAGAATGGCTTCCATCACAAATAGTTTAATATCTCAACCACCCAATCCTCCACATCATGCACCACCACAGCggtctatgaaagctgttcttCCACCAATAACCCAGCAACAATTTGATCTCTTTAATAATCTTAATACGGAAGATATCGTTAAGAGAGTCAAGGAAGCTCTGAGCCAGTATTCAATAAGCCAAAGGCTATTCGGAGAATCTGTTCTTGGTCTGTCGCAAGGGTCTGTCAGTGACTTACTGGCCAGACCTAAACCGTGGCATATGCTGACCCAAAAGGGAAGAGAACCATTTattagaatgaaaatgtttttagaagATGACAATGCTGTACATAAATTGGTTGCATCACAATATAAAATTGCACCCGAAAAACTAATGAGAACTGGAAACTACAGTGGAGCACCTGTTTGTCCACCGAACATGAGCAAACCGATGCCACCTACACCGAAGATGTTATCGGACGCCACATCGCTTTTGAGCAAGATGCAACAGGAACAATTACTCAGTTCTGGGCATTTAGGTCATTTGGGACAGCCTACACCTCTTCTATTAACTCCGCCGGGCTTCCCTCCTCATCACGCAGTAACTTTGCCACCACAACATCACGACAATAATAACAAAGAACGAAAACCGCAGCCGCCACCTCAATCGCATCACCAGCCCTCTATTATGCGAAGTCTTCATCAACATATGTCGCCTAGTGTATATGAAATGGCTGCATTGACACAGGACTTAGATACACAAACCATCACAACTAAAATCAAAGAAGCACTATTAGCAAATAATATTGGACAAAAAATCTTTGGCGAGGCCGTGCTGGGATTATCGCAAGGATCAGTTAGTGAATTATTATCGAAGCCGAAACCTTGGCACATGCTCAGCATAAAAGGCAGGGAACCATTTATCCGAATGCAGCTTTGGCTCAGTGATGCTCATAACATCGATCGTCTTCAAGCATTAAAAAATGAACGACGGGAAGCAAACAAAAGAAGACGCTCAAGCGGCCCCGGCCAAGACAACTCGTCAGACACGTCGTCTAACGACACGTCAGAGTTTTATCACTCGAGCTCACCGGGTCCAACGTCTGGTGTCCCTTCTGCTAAAAAGCAACGAGTTTTATTCTCCGAGGAACAGAAGGAAGCATTGAAGCTAGCATTCGCACTCGACCCGTATCCAAATATGCCAACAATTGAATTCCTGGCGTCCGAATTAGGATTATCGACAAGAACGATAACCAACTGGTTTCACAACCACCGTATGCGCTTAAAACAACAGGCGCCCCACGGTCTTCCGGCGGAGCCTCCGGCGCGTGATCAGTCTTCGGCACCCTTCGACCCCGTTCAATTTAGACTTCTGCTAAATCAGAGGCTACTAGAATTACAAAAGGAAAGAATGGGCCTAGCGGGAGTTCCACTGCCGTATCCGCCCTACTTCGCCGCAAATTCTAATTTCGCCGCTCTAATGAGTCGGGGACTTCTCCAGCCCGACGTCCAGGGGAAAGACGTGGCGAGCGGCCTCGACCTGTCCATGCCTCTGAAGCGAGAGCCGGACGCGGACGATTTCGAGGACGACGACGTCGAGAGCAACCTCGGATCGGAGGACTCGCTGGACGAGGAATCGAAGACTGAGCCGAAAGCGGCGTCGACGCCCGCCAGTCGATCGAGCCGGAGAAAACCGGTCGCGCCGCAGTGGGTCAACCCCGACTGGCAGGACGAGAAGCCGCGCAATCCCGACGAGGTGATCATCAACGGCGTGTGCGTGATGCGAAGCGACGACTTCCGCCGCGACCCCGAGCAGACCGTGCGCGTGGAGCCCTCGCCCGTACCGCGAGACTCCTCCCCCGGCCCGCGCACGCCGCACACCCCGCACACCCCCCACACGCCGGCGCCGCACACGCCGCGCCCGCCGCTCACGCCGCTCGCGCCCGACGTGCTGCCCGACGACAAAATCAAGACTGAGGCGGACGACGACCGGTGGGAGTACTAG
- Protein Sequence
- MSTLTISTVQCKSLKPVTWTATESVTIAQLVEDVRRLQASLSALQEAHAQQLQRLEERLDEKKQHIARLEARLDTQRDYDEIKREISLLRSMDLGPNDRDRKPEPIRSPSAPSLREERDSAERERSTERRDPGGEEWASTPPPLNNNTTHHNNNGPLPLPLPPPSPYRFEEHRPYRFAEDMGPLPPGALVGRLGDSLIPKGDPMEARLQEMLRYNMDKYANSNLDTLHISRRVRELLSVHNIGQRLFAKYVLGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDEAAIMLLKSLIPKKVGTKDGTAGAGFGRSESDGDERLAHMLNEASHIMKTPTLQSNNDDSRSNDDSSSPRTQCPSPFSNKDSSQNRRLKKYENDDIPQEKVVRIYQEELAKIMTRRVEDMRHSRDGFPGMFPPFFSGGMPPHMERPPEDIRMALEAYHRELAKIQPGGNIPNLHNLPGMPPFPNLLALQQQAMQAQNQHMNGSGAVQDLSLPKEKSSKVNGITDNDKERQMDAEEAIRHAGSAFSLVRPKLEPGQQSTGSSASSPLGNAILPPAITPNDEFTSSAVASPLQRMASITNSLISQPPNPPHHAPPQRSMKAVLPPITQQQFDLFNNLNTEDIVKRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGNYSGAPVCPPNMSKPMPPTPKMLSDATSLLSKMQQEQLLSSGHLGHLGQPTPLLLTPPGFPPHHAVTLPPQHHDNNNKERKPQPPPQSHHQPSIMRSLHQHMSPSVYEMAALTQDLDTQTITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDAHNIDRLQALKNERREANKRRRSSGPGQDNSSDTSSNDTSEFYHSSSPGPTSGVPSAKKQRVLFSEEQKEALKLAFALDPYPNMPTIEFLASELGLSTRTITNWFHNHRMRLKQQAPHGLPAEPPARDQSSAPFDPVQFRLLLNQRLLELQKERMGLAGVPLPYPPYFAANSNFAALMSRGLLQPDVQGKDVASGLDLSMPLKREPDADDFEDDDVESNLGSEDSLDEESKTEPKAASTPASRSSRRKPVAPQWVNPDWQDEKPRNPDEVIINGVCVMRSDDFRRDPEQTVRVEPSPVPRDSSPGPRTPHTPHTPHTPAPHTPRPPLTPLAPDVLPDDKIKTEADDDRWEY*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00887212;
- 90% Identity
- iTF_01034322;
- 80% Identity
- iTF_00744496;