Basic Information

Gene Symbol
arid5b
Assembly
GCA_905404095.1
Location
FR990044.1:31622626-31641067[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 4e-13 1.8e-09 39.0 0.0 2 89 255 329 254 329 0.90

Sequence Information

Coding Sequence
ATGCGGCCGCCGCGCGTGTGGTCGGGGCCTAACGCGGCCGTTGCACCGAATAGATCGGACGCGCTATCAATTCTGCGGCGCGCATGTCACGAGGTGCTGGCCATCAACGACAAGGTGGTGCTCCGCGCGGAGGACCTGCTGAGCTGGGTGTGCGTGGGGCGCGAGTGGCGCTGGGGGCTGCGGGCCGTGTGGCGCGGGGACTGCGCCCCACCCgcgcccgcccccgccgccgcgccgcacaCCACGCCGCTGCACCACACGCGTCTGGACTTCAGCGACGTGGAGAAGGAGAAGAGCGCCATCACAATAGACGAGGAGGCGCCGGGCGTGGTGGTGTTCTCGTACCCGCGCTACTGCCGCTACCGCGCGCTGGCGGCGCGGCTGGAGGGCATCCAGGCGCGCTGGCTGCGGGACTCGCTGGTCGCCGCGCTGGGCGGGTACGCCGCGCCCACGCGCAACACCCGCATACTGTACTGCAAGGACACATTCGAGTACCCGGAGCTGGAGGGGCACGAGTTCGTGTGCAACCACCTGTCGCCCAAGCTGAAGGGCCGGCCGCGCGGGCGCCGGCGCCGAGCCCTCGACCGCTCGCCCGGCCGATCGCCCGCCAGGTCTGACTCGCACTCCAGCGAATCCGATGGACGACACACGCCCGATATCAAGACGCACAGACGACTGTCCCTCCGCAACGGGCCGGGCAAGGAGGGTGCGGGGGAGAACGGGGAGGTGCGGGAGGTGCGGGAGGTTCGGGCGAGCGCCGAGGACGAGGCCTTCATGTCGCAGCTCATCCACTTCTACCGCGACCGCAGCGACACGCTCAAGATCGCGCACACGCTCAAACACATGTCGCTGCGGCTGATCTACATGGGCGTGGTGTCGCGCGGCGGGTACGAGGCGGTGTGCCGCGACAAGCTGTGGCGACACCTCTACTCCGACCTCGGCCCGCGCGTGCGCCGCCTGTACGAGAGATGCCTCCTCCCATTCGAGAACCACGAGAGGAGGTTGCGCAAGAAATACATGAAGGGGCTCAACGGCAAAGTGGAGCAGAAGGTGGACACCATCGAGGTGGGGGACTCCCCCCTGCGCGAGGACAAGCGCCTGCGCACCCCCTCCCCCGCCCCCCAGCTTGACAACGAGACGGGGGAAGTTCTCAAGGACGACATGACGGTCACCTCGAAACCGGCGGAGGAGCTCAACCGCGAGTTCCTGGACTCGCTGCCCGAGCCCGAGAAGCCGGCCAAGATATCCGTGAAGCCGGTGGAGAAGTTGATCGAGCCGAGTGTGAAGGATGTGAGCGTGGCCGACGGCGCTCAAGACCTTAAAGATAAACTGTCAGATGATCAGAAACGGGACGGGCTCTACAACGACGCGCCAAAATATATGGGCAACTCGGAGGGGGGCGCTGCGGGCGCGGCGTGGCGCGGGCCGCCGGCGCGTGCGCCGCTCGCCGACCTGGGCCCGCTCGCCGCGCTCACGGACAACCACAACGGACACGCGCAGAAGAGCCGGCCGGCGGGGCGCAGCTCCCTGCGCGCGGTGCGGGTGAAGCCGGCGCGCCCCCCGCAGCCCGCGCCCGCCACCACGCAGGCCGCGCCGACGTCGTCGGGGCGCACGGGGCCCTCCCCGCCCAACAACTTCGGCATCCACCACCCGCCGCCCGCCCCCGCCCcacccgcgccgcccgcccagCCGCTCGCGCCACCGCACAGCGATGACGATATCGTCGAGGTCCCCTACAAACCAAAAAGCCCCGAGATTATCGACCTCGACGAGTACCCGGAGAGCCCGCAGGCGGTCAAGCGGAAGAAGCTGGACATCCTGAAGGAGCGCGGGCTGGAGGTGACGGCCGTGCCGCCCGCGTGGGGGGTGCCGCTCCCGGGGGCCGTGCCGCTGCCGGGGGCGGTGCCGCTGCTGCCCGGGCCGCTACTGCACCCGCTGCTGGCGCCGGCGCAGCTCTACCAAATGTACAACATCCTGCCGCCCGCCTACCCCAACGGCGCGCAGGCACCCAAGGTCATCCAGGCCGTGAGCGCGTTCGGCACGGCCGGGCCCGAGAAGACCGTGTACGGCAACCCCAAGGACCCGTTCATGCCGCCGCCGCACGTGCTGGGGTGCGCGCCCGTGCGCCCGCGCCCGCTGTCGCCGCTCGCACGCGACGTGCTCGACCTCACGTGTCCGGCGCCCGAGCCGCGCGCGCCCGCCGTCGAGATCGTCCGCGTGCCGCCCGCACCCTCCCCCGCGCGctcgcccgccgccgccgcgcagaACCTCGCCAAGAACTACACGCTGCTGGACGGCAAGGCCGTGGTCGGCTCCAACCTGGAGATCACGCTGGTGGACCCCAAGGCCCAGACCCCGCCGAAGCGGCCGCCGCAGAAGCGCAACTCGAACGGCAAGTTCGCGGCGAAGACGCCCACGCCGCCCAAGGACTACCGGTACCCGCCGGCGTCGCCGTCCGCCAATCGCGCGGCGCCGGTGGCGTACCCGGCGCGGGACGAGTCGCCCACGAGCTCGACGGGCTCGCGGGACTCGGCGTCGTCGGGCTTCCTCAACGCGTTCAAGGCGCCGGGCGCGGCGCTGCCCTTCGACCCGCTGTACGTCAGCTCGCTGTACGGCGGGCTGGGCCAGATGGACCAGCGGCAGCTCGCCATGTACCGCGACTTCATGGCGTCGCAGTTCCGCGGCTACTCGGGCCTGCTCAACATCGGCCCGCCCACCACCAAGAATTAG
Protein Sequence
MRPPRVWSGPNAAVAPNRSDALSILRRACHEVLAINDKVVLRAEDLLSWVCVGREWRWGLRAVWRGDCAPPAPAPAAAPHTTPLHHTRLDFSDVEKEKSAITIDEEAPGVVVFSYPRYCRYRALAARLEGIQARWLRDSLVAALGGYAAPTRNTRILYCKDTFEYPELEGHEFVCNHLSPKLKGRPRGRRRRALDRSPGRSPARSDSHSSESDGRHTPDIKTHRRLSLRNGPGKEGAGENGEVREVREVRASAEDEAFMSQLIHFYRDRSDTLKIAHTLKHMSLRLIYMGVVSRGGYEAVCRDKLWRHLYSDLGPRVRRLYERCLLPFENHERRLRKKYMKGLNGKVEQKVDTIEVGDSPLREDKRLRTPSPAPQLDNETGEVLKDDMTVTSKPAEELNREFLDSLPEPEKPAKISVKPVEKLIEPSVKDVSVADGAQDLKDKLSDDQKRDGLYNDAPKYMGNSEGGAAGAAWRGPPARAPLADLGPLAALTDNHNGHAQKSRPAGRSSLRAVRVKPARPPQPAPATTQAAPTSSGRTGPSPPNNFGIHHPPPAPAPPAPPAQPLAPPHSDDDIVEVPYKPKSPEIIDLDEYPESPQAVKRKKLDILKERGLEVTAVPPAWGVPLPGAVPLPGAVPLLPGPLLHPLLAPAQLYQMYNILPPAYPNGAQAPKVIQAVSAFGTAGPEKTVYGNPKDPFMPPPHVLGCAPVRPRPLSPLARDVLDLTCPAPEPRAPAVEIVRVPPAPSPARSPAAAAQNLAKNYTLLDGKAVVGSNLEITLVDPKAQTPPKRPPQKRNSNGKFAAKTPTPPKDYRYPPASPSANRAAPVAYPARDESPTSSTGSRDSASSGFLNAFKAPGAALPFDPLYVSSLYGGLGQMDQRQLAMYRDFMASQFRGYSGLLNIGPPTTKN*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00403554;
90% Identity
-
80% Identity
-