Gale020600.1
Basic Information
- Insect
- Glaucopsyche alexis
- Gene Symbol
- JARID2
- Assembly
- GCA_905404095.1
- Location
- FR990052.1:7573792-7603033[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.2e-20 3.2e-16 60.6 0.3 6 89 556 636 553 636 0.93 2 2 4.2 1.9e+04 -2.8 0.0 57 85 732 758 720 759 0.59
Sequence Information
- Coding Sequence
- ATGAAAAAGCCATTAGCAATAGGGGCATTAAATAGAAGAAAAAGTGTTAGAAGGAAATCTGAAGATACAGAACCGTTGCCTACACCAGAACCGCCAAGACAATCTATGAAGGAGCAAAATGATACAGTCACTGCAGGAAAGAAAAAGCCATTAGCCATAGTGGCATTAAATAGAAGAAAAAGCGTTAGAAGGAAATCTGATGACACAGAACCGCTGCCTACACCAGAACCGCCAAGACAATCTATGAAGGAGCAAAATAATACAGTCACTGCAGacTCTAACAACAGTGGGTTATATTATGGAACTAACGGAATAGAAAGATGGATTTCAGAAAGTACAAAAGACATAACTAAGAGTAAGAACTTTAAAGTTCCTGTATTAccacaaaagaaaaagaaaattgataAAAGTCCAATCACTGAAAAAAAGAAATCAAAAACTGCTTTGCCACTAAAGAATATTTGTTCCTCTGTTAAATTTGTGTATCTAAAAGATGTAATGAATGCTTCTCAAGATGATATTGATGGTAATTGCAATAATTGCACACGCTGCGAAATTATCAAGAAGGTTGTGGAATTATCGAAACTAGTCCGCGATACGCGTAAAACCACTAGAAGCAATAGTCTTGATATAGACCCAAGCACGGAAATGACTGTCTCTGCCTACACTAACATACCGAGCCCGCGAGTTCACGGCACTGCCATCACCCGTCTAGACAAGTCTAGAACTTCGAAAGGCGAAGACAGACAAGCTTTCTATATGGACCTTTTACCCGGATCAGATAAAATTGTAGAAGTTTCATGGTGTAAAATACCGAATCGTAAGGACTCCCTAATGAGCGCGCGTCTTATTTCAAAAACAAATTTAACAAACTCTGGTGATGTCACACTCGGCAATAATGAGACTTTGTTAGATAAATTGCTCCAActatataaagaaaaaacaCATACTGAAAAAACAGCCAATAAACCAACAGACACAAAGGCACAAACTAGCAAGGAAAACAATACAGAGAAAACCGAAAATAATACGAACAGCGAAAAgcttaaacaaacaaatattgatACAACTAAAAACACACAGGAAAACGTGAAAACTTCTAGTAAACAATccaatgtggaaaaaacgacAAATAGAGATAAAGTAATTAACAATGTAGAAAAATCTACTAAACAAACAATTTCAGACACTTTAGTAAACAAAGAAAAACCCAAACAGACAAATGCAGAGAAATTTTCatgtaaacaaataaataagccAAAGAAAAATGAAAATGACATACCTCTTTCAAAAATTGCTGAAACAAAGAATGACAATAAACCAGCCAGTTTAAGCAAGCGCCGTTTTTCTGAAAAAAGAAATGTTTCTCAGGATGCTTCAACATCTGATAACAAAAAGAAGAAAACCGAGGGTAATTTTCCGAAGAGCTTAGATCGGGCTAAATTGGTGGACGCTCCAGTATTCTATCCCAGTGAAGCTGAATTCACAGATCCAATAAGTTACTTCGAAAAAGTGATGCCGATTGCGTCACAGTTCGGCATCTGTAAAGTGGTACCGCCCGCCGACTTCAAGCCGCCGTGTACACTGAGCGACACGAATCGCTTCACGGTCACCAACCAGTACATACCGCGCCTGTACACGCGCTGGGGCCCTGCCTTCAGAGAGATGTGCGCCATACGCTCGTATCTCGCCTCCCAGAAAGTACATTTCACTAGAGCGCCATTGttggAGGGTCTCGAAGTTAATTTACCGAAGATGTATCACACGGTCCAGCGACTAGGTGGACTGAAAAATGTATTCGACAAGAAAAAATGGAATCGAGTCGCGGAAGAAATGCATTTCTATCAGCTAACGAACCCCAGCAAAAAGCTGGAACAAATATACGTAAAATACCTTCTGCCGTACGATACGCTCACTAACAgAGAAAGGCAAATGAAAATCGCCGAAGTAGAACAGATGTGGCAAAAGAAGAATAAAAAAATGCTGGCTAGGGCTATTAATCCTTTGCACCGTCAGAAACGTTTGCTCGGCGATTCGAGTTCGGATTCAGATACAGATTCGGAACAGGAGGTGGGTTCGGATTCGGACGAGGAGGTCACTTCGAGTAGCCACAACAGCGACCCGCTTGCGGAGGCAGAGGAGTGTATAGTCACGGGCAGGACTATGAACTTAAACAACTTTGAGAAGGTGGCCCAAAACGCGTTCAAAATGTACATCCCTCCCAATGAGGAATCTAATACAAAGACCATAGAGAATTTGTACTGGAAGCTGGTCTTATTCGGCGCGGACCACGTGTGCGTGAACAGCGCGAGTGTTGATACCGGGGAGGAGGGTTACGGCTTTACCAAAAACAAGGGTAACCCGTATGGAAAACATCCTTGGAACTTGAAGGTGATAAGCCAGAATAATGGCAATTTACTCCGTCCACTCGGCCCAGTGCTGGGCCTAACCGTGCCCACGCTGCACCTGGGCATGATCTTCTCCACGAGCTGCTGGCACCGCGACCCGCACGCGCTGCCCTGGATAGAGTACATGCACCAGGGTCCGGAGAAGATATGGTACGGCATACCAGACGAACAAAGTGACAACTTCCGCAAGGCGGTGGAGGTGCTGTGTCCGACGGTCTGCCAGAACAAGGGCATATGGCTGTCGTCCGACATCACCATGATCCCGCCCAACATGCTGCTCGAGCATGACGTGTCGCTGTCGAAGATCACGCAGAAACCGCACGAGTTTGTTATAGTGTTCCCGAAGGCGTACTCGAGCTCCATATGCACCGGCTACACGATCTCCGAGAGCGTGTACTTCGCCACTCAGTCCTGGCTCACCACCATGCCCAGCGTGTTTCAAGAGCTGCGCGAAAGCTGCGAGCCGACGACGTTCGCGCTGGAGCAGTTACTAATCAGCGTGGCGCGGGACGGGCGCGCACCGCTGCGCGTGCTGCAGACCGCGCACGCCACGCTCTCCACCGTCGTCACAGCCGAGCTCGCCGCTCGTAGCGCACTGCGCGCCGCCGGACTAAAGACGAATAGTGTTTTTCGCAATAGGTACAAGGCTCCTATCGTGCACTATGGTGGTTGCAAGTTGATGTATAAGGGCCTTCGCTGCGTGCGACTGGTGCCCGTCGCGGGTGCCCGCTCGGCGTGCTTGTTTCATGTTATCCCATAG
- Protein Sequence
- MKKPLAIGALNRRKSVRRKSEDTEPLPTPEPPRQSMKEQNDTVTAGKKKPLAIVALNRRKSVRRKSDDTEPLPTPEPPRQSMKEQNNTVTADSNNSGLYYGTNGIERWISESTKDITKSKNFKVPVLPQKKKKIDKSPITEKKKSKTALPLKNICSSVKFVYLKDVMNASQDDIDGNCNNCTRCEIIKKVVELSKLVRDTRKTTRSNSLDIDPSTEMTVSAYTNIPSPRVHGTAITRLDKSRTSKGEDRQAFYMDLLPGSDKIVEVSWCKIPNRKDSLMSARLISKTNLTNSGDVTLGNNETLLDKLLQLYKEKTHTEKTANKPTDTKAQTSKENNTEKTENNTNSEKLKQTNIDTTKNTQENVKTSSKQSNVEKTTNRDKVINNVEKSTKQTISDTLVNKEKPKQTNAEKFSCKQINKPKKNENDIPLSKIAETKNDNKPASLSKRRFSEKRNVSQDASTSDNKKKKTEGNFPKSLDRAKLVDAPVFYPSEAEFTDPISYFEKVMPIASQFGICKVVPPADFKPPCTLSDTNRFTVTNQYIPRLYTRWGPAFREMCAIRSYLASQKVHFTRAPLLEGLEVNLPKMYHTVQRLGGLKNVFDKKKWNRVAEEMHFYQLTNPSKKLEQIYVKYLLPYDTLTNRERQMKIAEVEQMWQKKNKKMLARAINPLHRQKRLLGDSSSDSDTDSEQEVGSDSDEEVTSSSHNSDPLAEAEECIVTGRTMNLNNFEKVAQNAFKMYIPPNEESNTKTIENLYWKLVLFGADHVCVNSASVDTGEEGYGFTKNKGNPYGKHPWNLKVISQNNGNLLRPLGPVLGLTVPTLHLGMIFSTSCWHRDPHALPWIEYMHQGPEKIWYGIPDEQSDNFRKAVEVLCPTVCQNKGIWLSSDITMIPPNMLLEHDVSLSKITQKPHEFVIVFPKAYSSSICTGYTISESVYFATQSWLTTMPSVFQELRESCEPTTFALEQLLISVARDGRAPLRVLQTAHATLSTVVTAELAARSALRAAGLKTNSVFRNRYKAPIVHYGGCKLMYKGLRCVRLVPVAGARSACLFHVIP*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00288645;
- 90% Identity
- -
- 80% Identity
- -