Basic Information

Gene Symbol
Arid4b
Assembly
GCA_905404095.1
Location
FR990045.1:24273117-24298677[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 3.1e-30 1.4e-26 93.8 0.1 1 89 295 381 295 381 0.96

Sequence Information

Coding Sequence
ATGATGTATGATGTGATCGTAGCGTGCGCGCGATTACAAGAATTTAATGCGCAGGGCGATGACCCCCCATTTCTTCCGGTGGGCACTGAAGTCAGTGCTAAATATAAAGGTGCTTTTTGTGAGGCAAAGATAAAAAAAGTTGTTCGCAATATAAAATGCAAGGTCACCTTGAAAGCTGGTGGTATTACAACCGTTAACGATGATGTCATTAAGGGAACATTACGAGTTGGTAATACGGTTGAGGTCAGGCAGGATCCAAAAAAGGATGCTATGGAGGCAGTGATTACAAAAATACAAGACTGCAGCCAGTATACTGTTGTATTTGATGATGGTGATATAACTACACTGAGAAGATCAGCTCTGTGTCTGAAGAGCGGGAGACATTTCAATGAAAGTGAGACATTAGATCAGCTGCCACTTACACATCCTGAGCACTTCTCAACACCTGTTATAGCAGGACGACGAGGACGGAGGGGCAGAGCTCAGTCATCGGAGAGCGAAAGCGAGAGCAGCGGGTCGCGGCGCGCGGCGGACAGCGAGCCGCACGTGGGCCGAGTGGTGCTGGTGGaggcggcgggcgcgggcgagCGGCGCCGCCCCCACCAGCCCGCCTTCCCCGCGCTCGTCGTCGCGCCCACGCCCATCATCAAGGTCAAGGAGGACTACCTGGTGCGCTCGTTCAAGGACGGACGATATTACACGGTACCGAAGAAGGAGGCGCGCGAGTTCCGGCGCGGGTCGGCGCCGCTGGAGTGGTGCGGCGTGGACGCGGCGCTACAGTACCTCAACAACGGCGTGCTGCCGCCGCACTGGGACCGCGACTCCATATTCAACGAGCCCAGGAACACCTCCGATGATAGTTCAGATGACGAGCCTCGTGAGGAGAAGGACCATTTCGTGGCGCAGCTGTACAAGTTCATGGACGACCGCGGTACGCCGCTCAACCGGAACCCCACCATCGCCAACAAAGACATCGACTTGTACAGATTGTTCCGAGTTGTTCAGAAAAACGGTGGTTATAATCGTGTCACGAACCAAAATCAATGGAAGACAATAGCAGACAAAATGGGCTTCCATCCTGTCACTACCAGTATTACCAACCTATGCAAACAAGCATACAAAAAGTTCCTGCACAGTTTCGAGGACTTCTACCGCAAGCTGGGCGTGACGCTGGTGGCGCACCCGCGCGGCGCACGCACGCCGCCCGCCGGCCGCTCGCTCATCCGCGACCGGGACCGCCAGCCGCCCGCCGCCTCGCCGCAGCCGACCATGCCGCAGCCCGCGCCGCATCCCGCGCCGCAGCCCGCGCAACCCGCACAGCGAACAAAAGACAAGGAGTCCGATAAGAGTGAGACGGACAAAAGTGAGAAAGAAGAGAAGATAGAGAAGGCGAAGGAGAAGCCCCGCGTCAGCGACGAGGACGACAGCGCCGACAACCAGCCGCTGCTCGCCACCACCGCACCCAAGGTTGAGAAGGAGAAAGAAAAAGAGAAGGACAAACCAATCGCCGAAGAGAAGGCTCCGAGTAAACCTCGCTCCCAATCCAAAACCCGCAGCCTGCCGCCCATCAAAACTGAACCTTTCGAGAAAAGAACTCCCAAGAGAAAAGTGCTTTCGTCGAAATTGAGCGACACCGCGAGTGTAGGCAGCGCGCGCGCATCCCGCAGGCCTCACGTCTCTACCGACAGCGACAGCTCGGGAAGGGCTTCGAGATGTGGCGTGATAAAAAAGATGCAAAGCCGGCGCAGTCAAAGCGCCAATTCGGCCAGCAGCGGCAACACCATCGCCTCCAACAGCAGCAAGAGACCGCGCAAGCGGAAATCCACTGAGCCGTCTACGAGCGAGCCCACGCGGTCGGGCGGCGCGGCGGTGAAGGCGCAGGTCGGCGACAAGCTCAAGGTGTACTACGGTCCCACGCAGTCAGAGTCCAAGGTGACGTACGAGGCGAAGGTGATCGAGGTGTCGGCGGCGGGCGCGCTGCGCGTGCACTACACGGGCTGGAACACGCGCTACGACGAGTGGATCAAGCCGCAGCGCATCGCGCTCAACGTCACGCAGCACGAGGCGAGAAACAAGAAGGGCACGAATCTCAACCGGCGAGCTAGATCTAAGAGGACTGAAAGAACTgaagaATCATCAGCACGATCGGATTCCGACAGCTCCGACTCTGACGTAAATGAAAAGATACCTGCCAAGAAGTTGGATGATAAAAGTATTGTAAAAAcacCATCAAGACCAAAAGAAAGTAAACCGAACGATGGAAACAACTCTAGTAAGGCGCGAAAAAGGCCAATCCGAACTATATCGACACCACCCACGACATCCAGTCTACCTAAGAAACCTCGTGTTGCCGACACTACCCACAAAGGCCGCGACTATGATCTCAACgagattagatcagaattaaaggGTCTTCAAACAGTTAAACAAGAAGCAGAAGAAAATGTAAAGACGGAAACTCCTCAGAAAGATCCTGTGCTTAGTCCGATACAAACTGCCACCGCGCCCGAACCGCAGCCCTCTGTCTCTGTGGAGAAACAGGCCGAGGATGTCTACGAATTTAAGGAGCCCGAGCCTTTCGAGCTAGAACTACACGACGAGAAAAAGAAGAGGTCTCATCGTATATTCGATGACATCTCTCCTAGTAAATATACATCAACATTGTCCAAGTCTTTGAGCGAAGAAATTTCAGATGATGCTATAAAACGACCTACATCGTTTAGGTCACCGTCCTTATCGCCCTTCCGAGATTTCGGAACATCACGAGATGCGCCCGAGAGGCAAAGCCCTGAAGATAATTCTAAAGATGGATTGTTTTCATTGGACGATGATTCGATGCCCGGGGAAAGTAGTTTGGGACCTATATTTGAAGGTTTCACCCCTGCTAAGAATCAGGAAACTTACTCTAAAAAGAACAAAGTCAGTAAACTGAGAGAACTTATTGATGATTCTCCGGACAGTCCAGCCGATGATGAACAATCGTCAGAAGACGATTCAGACGAAGCACTAAAAGTAGCACCACGAGAGCCAACCCCGGAACTGCCACCAAAAGAGACTATTAAAACACCTGAACCTATCAAGGAAGAAGAGAATGATGCCGACGACGATgacgacgacgacgatgatgatgatgatgatgacgacgaTGACGACGACGATAAGGAGAATGACACGTCGAAGGCTGTCAACGACGCTATTTTGTCTCTTAAAGATATTCCTGCTATTGAAACTGTCCCCGAACCTCCTAAAACTCCTCCTCCTCCTACCAAAGAGACGTCTTCCACAAATGTACAACCCGCTGTAGAAATCAAAACAGAAAGTAAAGAAATCAAAGTTGAAGCAAAAGGGAACGATATACCGCTTCCGACTGCTGAACCAAAACCAAAAATAGAGAAATTAGACCACGACCCTGCAATATCAAAATTAGAACCTCCTTCGAGTCCTTTGATAGATACAGAAGAAGATAAATCTGAACCCGATAGCCCTGCGAGAATCGACGTTCTACCAGTGCCACCGCCAGGGTTCCTTTTGCAATCTGAAGGTCCAAAAATTgctgaaaaattattaaaagctattaacAGTGCAAAAATATTATCCATGTCTCCTACTCCTATTGAAGAGAAACCAGAGAGTCCTAAGGAGGAAAGTAAGAAAGTTGAAGAGGCGTCGCCAGCGAAGACTGAACCGCCAGCACCTCCAAAACCCGACCTTCTTAAGCCCGTTACCAAACTCGATGCCGTCAAAAGGTTAAGTCCGGCGGAAGTTCGAGAATCCATATTCGGCGAGCCTTCGAAGATGAGCGACATGAAACACGAGCTGGCCGATATCAAAAAGGTCAAACCAAAGGAGCCGTCTCCACCTCGATTGCAAAGCCCACTCAGTATATTAGAAAGAAGAAAAAGCGTTGCAGAACTGCAACTGCCCGCACCCGGAAAGAATAAAGTGCTCAGTGACACCATACAAAAACTGTCCAGTCAAATAAACCAGTCCGTGGCCGCAGCGAGTATTCCGAGTATTCCAATACCTCCATTCCCCGCCGCCGACAGGAGCGACTCCAGCGACTCCGATGATTCAGATCAAAGGCTAATAATCGACAAGCTGTCGGAGGAGTGGAGCGGTGGTAGCGGCGGCAGCGGGCGGCTGGCGGCGCGCGCTCTGCACGCCAGCAAGTCGCCCGGCGAGTGGAGCGCGGGCGAGTCGCTGCTCATGCTCGAGGACGCCTGCAAGAACGAGCGCAAGCACAGTGCGAACGTGGTGGTGGCGGGCGGGACGCGCGCGGGGGAGGAGGACAGCAACCTGTCGCTGCTGCTGTGCGAGGAGACCATTCCCGGCTCGCCCGCGCCCGACGACCCGCCGCCGCGGCACCACCTGCCCTTCGCCTGCGCGCCGCCGCACCACGTCGCCAAGGGCGAGGAGCGTCATGTCGCAGGCGGCGGGGCGACGCGGGAGCGCGAGACGGGCCCGGCGGAGGGGGCGAGGAGCGAGGGCTGGCGACGCCGCCCCGACCGCACGCCGCCCACGACCTCCACCACGCCCGACAGCAGCCTCGACCTGTCGCCGCACAGGGAAAGGCGTATATCGGAACGAGATAGCCCATCAGAGCGGAAAGAGGATGAAGATGATAGTAACATACAAGATCCTGTTGGACATGGGGGCGGTCGGTCGCGTAAGGCGTCGGAGTCAGGTGCGGGTCGCACGCGCGGCCGGCGACGCCGCGACACCGACGAGCCGTCGCCCGCGACGCCGCACTCGCCCGCCGCCGCGCCTGCGCCGCTCAAGTACAACTTCTACGTGGAACTGGATCCAGCGTGGGATAGTCTGACTCGAATAAAGATTTTAACGAACCAAATGGCGGCGCTGCGCAAGACGTACAGCTCCGTACGGGCAGAACTTGTCGCGATCGACCGCCGCCGCAAGAAACTACGGCGCAAAGAAAGAGAAGCTATCAAAGCAGCCAAGGCGTCATGTGCGTGA
Protein Sequence
MMYDVIVACARLQEFNAQGDDPPFLPVGTEVSAKYKGAFCEAKIKKVVRNIKCKVTLKAGGITTVNDDVIKGTLRVGNTVEVRQDPKKDAMEAVITKIQDCSQYTVVFDDGDITTLRRSALCLKSGRHFNESETLDQLPLTHPEHFSTPVIAGRRGRRGRAQSSESESESSGSRRAADSEPHVGRVVLVEAAGAGERRRPHQPAFPALVVAPTPIIKVKEDYLVRSFKDGRYYTVPKKEAREFRRGSAPLEWCGVDAALQYLNNGVLPPHWDRDSIFNEPRNTSDDSSDDEPREEKDHFVAQLYKFMDDRGTPLNRNPTIANKDIDLYRLFRVVQKNGGYNRVTNQNQWKTIADKMGFHPVTTSITNLCKQAYKKFLHSFEDFYRKLGVTLVAHPRGARTPPAGRSLIRDRDRQPPAASPQPTMPQPAPHPAPQPAQPAQRTKDKESDKSETDKSEKEEKIEKAKEKPRVSDEDDSADNQPLLATTAPKVEKEKEKEKDKPIAEEKAPSKPRSQSKTRSLPPIKTEPFEKRTPKRKVLSSKLSDTASVGSARASRRPHVSTDSDSSGRASRCGVIKKMQSRRSQSANSASSGNTIASNSSKRPRKRKSTEPSTSEPTRSGGAAVKAQVGDKLKVYYGPTQSESKVTYEAKVIEVSAAGALRVHYTGWNTRYDEWIKPQRIALNVTQHEARNKKGTNLNRRARSKRTERTEESSARSDSDSSDSDVNEKIPAKKLDDKSIVKTPSRPKESKPNDGNNSSKARKRPIRTISTPPTTSSLPKKPRVADTTHKGRDYDLNEIRSELKGLQTVKQEAEENVKTETPQKDPVLSPIQTATAPEPQPSVSVEKQAEDVYEFKEPEPFELELHDEKKKRSHRIFDDISPSKYTSTLSKSLSEEISDDAIKRPTSFRSPSLSPFRDFGTSRDAPERQSPEDNSKDGLFSLDDDSMPGESSLGPIFEGFTPAKNQETYSKKNKVSKLRELIDDSPDSPADDEQSSEDDSDEALKVAPREPTPELPPKETIKTPEPIKEEENDADDDDDDDDDDDDDDDDDDDDKENDTSKAVNDAILSLKDIPAIETVPEPPKTPPPPTKETSSTNVQPAVEIKTESKEIKVEAKGNDIPLPTAEPKPKIEKLDHDPAISKLEPPSSPLIDTEEDKSEPDSPARIDVLPVPPPGFLLQSEGPKIAEKLLKAINSAKILSMSPTPIEEKPESPKEESKKVEEASPAKTEPPAPPKPDLLKPVTKLDAVKRLSPAEVRESIFGEPSKMSDMKHELADIKKVKPKEPSPPRLQSPLSILERRKSVAELQLPAPGKNKVLSDTIQKLSSQINQSVAAASIPSIPIPPFPAADRSDSSDSDDSDQRLIIDKLSEEWSGGSGGSGRLAARALHASKSPGEWSAGESLLMLEDACKNERKHSANVVVAGGTRAGEEDSNLSLLLCEETIPGSPAPDDPPPRHHLPFACAPPHHVAKGEERHVAGGGATRERETGPAEGARSEGWRRRPDRTPPTTSTTPDSSLDLSPHRERRISERDSPSERKEDEDDSNIQDPVGHGGGRSRKASESGAGRTRGRRRRDTDEPSPATPHSPAAAPAPLKYNFYVELDPAWDSLTRIKILTNQMAALRKTYSSVRAELVAIDRRRKKLRRKEREAIKAAKASCA*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01247860;
90% Identity
-
80% Identity
-