Basic Information

Gene Symbol
XBP1
Assembly
GCA_905404095.1
Location
FR990053.1:18850632-18852833[+]

Transcription Factor Domain

TF Family
TF_bZIP
Domain
bZIP domain
PFAM
AnimalTFDB
TF Group
Basic Domians group
Description
bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 3.8e-16 6e-13 49.7 7.8 2 52 43 93 43 96 0.96
2 2 0.00017 0.27 12.4 1.5 30 55 85 110 84 113 0.89

Sequence Information

Coding Sequence
ATGAGCGCACCGATCATCATAACTGTACCTAATAATTACCTGACGGTGGACGAAATGGAGTCGAAGGTTGTCGTCGACGTATCTCCTCCACCGTCCAGGAAACGAAGATTGGACCATTTATCGTGGGAGGAAAAGATGCAACGAAAGAAGTTGAAGAACAGAGTTGCAGCCCAGACATCGAGGGACAGGAAGAAGGCGAAAATGGATGAAATGGAGGCCAAAATCCAAAAATTCATGGACATGAATGAAAGATTGATGGGAGAAGTCGAAAACCTGAAGGCAATGAACGAGAGGTTACTGAACGAGAATGCAACGCTACGCAGCGAAGCCGCGGCACGGGACGTCGCGGGAGCCCCGAGACCAGCAGAGTCTCTACCTCAGCAGAAGGTGGGGCCCCCGACGGCGCTCCGTGCGGCGCGCGTGCTGCTGGCGATGTGTCTCCTCTCACAGACCTCCTCGCCCAGCTCGACTCCGACCACTTTGACCTCGATGCCCTCCATCAACTTGCAGACTCCCTCCTCCAGGAGATTGATGCAGGTGCTACAGGAGAGGCTGAAAATGTCCAAGTCCGGGAACTTGGAAGGTGCCCTGAAGGAGATCAAGTGGATACTGGCGCAACATTCATACGCACATCCCCACCCCGACACGCAAGTACAAACCAAGGAGGAGAACGGGGACAAAGGTGACATATTCTACGCGAGCTACGAAGCCAACGACTGCATCACAGTGGAAGTTCCATCGGATGACGACATAGTTGAACAAGTACCCGCAGTTGAGGACACACAATTCACGTGTTTAACAACGGACTTTCCGGACATAACCCTAGAATGTGACATGAAATTATTGTCCCCCATGAGCCTCTCGCCTAAATCGGCTGATGAAAACTTACTTGGTGTGTCTCCGACGCACACCAACTTCAGCTCGGATCTAGGTTATGAGTCCCTAGCTTCGCCGCTTAGTGAATCAGAATCTATGGACTTATCAGATTTTTGGTGTGAATCTTTTTCAGAATTATTTCCTGGTTTAGCTTGA
Protein Sequence
MSAPIIITVPNNYLTVDEMESKVVVDVSPPPSRKRRLDHLSWEEKMQRKKLKNRVAAQTSRDRKKAKMDEMEAKIQKFMDMNERLMGEVENLKAMNERLLNENATLRSEAAARDVAGAPRPAESLPQQKVGPPTALRAARVLLAMCLLSQTSSPSSTPTTLTSMPSINLQTPSSRRLMQVLQERLKMSKSGNLEGALKEIKWILAQHSYAHPHPDTQVQTKEENGDKGDIFYASYEANDCITVEVPSDDDIVEQVPAVEDTQFTCLTTDFPDITLECDMKLLSPMSLSPKSADENLLGVSPTHTNFSSDLGYESLASPLSESESMDLSDFWCESFSELFPGLA*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00687646;
90% Identity
-
80% Identity
-