Glac028446.1
Basic Information
- Insect
- Gerris lacustris
- Gene Symbol
- nfxl1_1
- Assembly
- GCA_951217055.1
- Location
- OX578279.1:40824915-40831913[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 20 0.54 1.5e+04 -2.3 0.6 15 18 123 126 122 127 0.81 2 20 2 5.7e+04 -5.0 1.9 15 19 165 169 165 169 0.85 3 20 0.69 2e+04 -2.6 0.9 4 10 200 206 200 206 0.91 4 20 1.8e-08 0.00051 21.6 16.9 1 19 214 231 214 231 0.99 5 20 1.7 4.7e+04 -3.9 0.8 6 18 256 260 255 261 0.49 6 20 1.7e-07 0.0049 18.5 16.1 3 18 268 283 266 284 0.91 7 20 1.3 3.8e+04 -3.6 1.0 6 10 309 313 308 313 0.88 8 20 7.2e-05 2.1 10.1 15.8 1 19 319 338 319 338 0.91 9 20 4.4e-06 0.13 14.0 13.3 1 18 373 390 373 391 0.97 10 20 1.8e-05 0.5 12.0 15.8 1 18 425 442 425 443 0.94 11 20 8.2e-10 2.3e-05 25.9 12.0 1 19 452 470 452 470 0.98 12 20 0.59 1.7e+04 -2.4 1.0 5 10 497 502 497 502 0.94 13 20 0.0011 33 6.2 4.7 10 19 518 527 516 527 0.92 14 20 0.0024 69 5.2 7.6 1 12 536 546 536 546 0.95 15 20 2 5.7e+04 -6.3 3.1 14 18 575 579 575 579 0.79 16 20 2 5.7e+04 -4.2 0.4 9 11 597 599 597 600 0.73 17 20 9.7e-05 2.8 9.7 6.5 1 12 616 627 606 627 0.91 18 20 0.02 5.8e+02 2.3 12.5 4 18 652 666 650 667 0.92 19 20 2.6e-05 0.73 11.5 14.5 1 17 712 727 712 732 0.90 20 20 0.35 1e+04 -1.7 0.7 5 10 761 766 761 766 0.95
Sequence Information
- Coding Sequence
- ATGGAGAGGAATAGAAATAATCCGTGGAACAGGAACCCTCCGAAGGGTAACAGATTGTCCGGAGCGAATGGAAACTTGGCTGTAAGGAACCCTTCTGGCGGAGAAGCAAAGTTTAGAGAAGCCCAGGAACGAATGCACCAATCTGTTAAAAAACATTTGGAAAATGAGTATGAGTCTTCTGAAGAAGAGGAAGAACTTGAAACTCAGCCTATTCttgAGTCCGTATTGAAATCATATTCACAGCTTGGTGGGCACATTGGAGATTTAGAAAGAACTCAGTCTCATTTGGAAAATACTTTTCAATCTGGATCAGCAGTTTGTCTCATTTGTATTGCAACTGTAAGGAGAGCTGACAAGATTTGGAGTTGTCAATCATGTTATGGATTCTTTCACCTCAACTGCATTCAAAGATGGGCAAAAGATAGCTTAGCACAACAGAAATTAATTGCTGAAGACCGGCCTAATTTGAAatcattagtttttaaatgGTTATGccCCAAATGTAGACAAGAGTACCAACCAGATGGTattcctaaaaaatatatttgtttctgtGGTCAAACAGAAGATCCAGAATATCAGCAGTGGCTAGTGCCACATTCATGTGGAGAGAGATGTAATCGAGCATTGCAGCCACTTTGTGGTCACACATGTCTTCTACTTTGTCATCCAGGTCCTTGCCCTCCGTGTCCAAAAGTTATCCAGGCAAAATGTTTCTGTAAACGTCAAACAAAGCAAGCAAGATGTAGTCATAAGTCATGGTCTTGCGGCAAGCCTTGTTCAACTCTGCTAGCTTGTAAAAAGCACAAGTGTCAGTCTCAATGTCATGATGGACCCTGTCCTCCTTGTGATAAAACAGAAGCATTCACCTGCCTTTGTGGGAATAAGACTAAGCGTATTCCATGTGCTCAGCTATCATGGCAATGTGACAAGGTTTGTGGCAAGCCATTCTCCTGTGGTTTGCATAAGTGTGATATCATTTGTCATCCAGGTGGTGGGTGTGGCCCATGCCCCAGGACTCAGCCTAGATCTTGTCCTTGTGGAAAATCTGTCCAAATACTACCTTGTGAACAAGATATACCAACTTGCGGTGGAACATGTGATAAAATACTTGACTGTGGTTTGCACAGGTGTCCTCAACGATGTCATAACTCTCCTTGCGGATCGTGTTTGGAAATAATTGAGAAAAGATGTCGTTGTGGTTTCAATTCAAAGGAAGTATCTTGTCGCAAGGATTATTTGTGTGAAATAAAGTGTAAAAGAACTAGAGACTGCAATATACACCCATGCAATAGAAAGTGCTGTGATGGTAACTGTCCACCTTGTGAGAAACCCTGTGGAAAGACTTTAAGCTGTGGTCAGCACAAATGTAATTCTGTATGCCACAGAGGTTTGTGCTACCCCTGTCAACAAACCAAGCCTCTATCTTGCAGATGTGGCATGACATCTGTCATTGTACCttgtgttaaaagaaaattacgtCCACCTAAATGTAACAAATTGTGCAGaataccaCCTGATTGCGATCATCCTAGTCGAGAGAGGCATAGATGTCACTTTGGTTCATGTCCAACTTGTCGACAGGTCTGTGGTAAAACTCTGTCATGTGGCCATACCTGTCCATCAAACTGTCATACTGCTGTACTTGCCTATTCAGAGCCCAATGCAAAACCAGCTACACCTTGTGATTTGgtaaatatgTCAGTGGAAATGAAAAAATTGCCTTGTCCTTTGTGCATCGTTCCTGTAGAAGTTACATGTCTTGGTAAGCATGAAACTATTCATGTTCCATGTCACAGAGCTACACCCACAAGCTGTGGCAGGCCATGTGGAAGACGGCTTGACTGCACTAATCACACTTGTCAGCTTCCATGCCATAAAGTACATGAGGAGAATGGGAAGAAGAAATGTGAAGAGTGTGATAAGAGCTGCCAACTTAAGAGGActtgtgatcatcagtgtaaacGATGGTGCCATCCACCTCCCTGTGCTGATTGTAACATAAGCATCAAGATGCCTTGCCACTGTAACGTCACATTTGTCTTTGCAAAGTGCCATGAATGGCAAGCTGCAAACAATGAACAGAAAAATCTTCTTCTTTCTTGTAGCAATAATTGCCCCAAACTtctGAGCTGTGGACACAGATGTGGTAAAAAATGCCACGAAGGAGAATGCACCCCTCAATCATCTTGTAAACGGAAAACTAAACTAACTTGCCCATGTAAACGTCTTAAGAAAGAATTTCAATGTTCTCTTGTCACTTCAGGATCTACCATTTTGACTTGTGATGAACTTTGCAATgaaatcaaacaaaacaaaattaagGAGGCAGAGAGAAGCCAGGAGCAAGCTCGCATAGCAGAAGAGAAAAGGAACAAAGAAGAATTAGAGAAATACGAGAAGAAGATGCAAGGAAGAAAAAGGTCAAGGAAGAGAGTAGACAGCCAGCAGAATACTGATGATAATTtcttaatgaaatataaatatttaattttagccacTAGTTCCATTGTCACTGCCGTAAttgcatttatatatttcaaataa
- Protein Sequence
- MERNRNNPWNRNPPKGNRLSGANGNLAVRNPSGGEAKFREAQERMHQSVKKHLENEYESSEEEEELETQPILESVLKSYSQLGGHIGDLERTQSHLENTFQSGSAVCLICIATVRRADKIWSCQSCYGFFHLNCIQRWAKDSLAQQKLIAEDRPNLKSLVFKWLCPKCRQEYQPDGIPKKYICFCGQTEDPEYQQWLVPHSCGERCNRALQPLCGHTCLLLCHPGPCPPCPKVIQAKCFCKRQTKQARCSHKSWSCGKPCSTLLACKKHKCQSQCHDGPCPPCDKTEAFTCLCGNKTKRIPCAQLSWQCDKVCGKPFSCGLHKCDIICHPGGGCGPCPRTQPRSCPCGKSVQILPCEQDIPTCGGTCDKILDCGLHRCPQRCHNSPCGSCLEIIEKRCRCGFNSKEVSCRKDYLCEIKCKRTRDCNIHPCNRKCCDGNCPPCEKPCGKTLSCGQHKCNSVCHRGLCYPCQQTKPLSCRCGMTSVIVPCVKRKLRPPKCNKLCRIPPDCDHPSRERHRCHFGSCPTCRQVCGKTLSCGHTCPSNCHTAVLAYSEPNAKPATPCDLVNMSVEMKKLPCPLCIVPVEVTCLGKHETIHVPCHRATPTSCGRPCGRRLDCTNHTCQLPCHKVHEENGKKKCEECDKSCQLKRTCDHQCKRWCHPPPCADCNISIKMPCHCNVTFVFAKCHEWQAANNEQKNLLLSCSNNCPKLLSCGHRCGKKCHEGECTPQSSCKRKTKLTCPCKRLKKEFQCSLVTSGSTILTCDELCNEIKQNKIKEAERSQEQARIAEEKRNKEELEKYEKKMQGRKRSRKRVDSQQNTDDNFLMKYKYLILATSSIVTAVIAFIYFK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00743371;
- 90% Identity
- iTF_00743371;
- 80% Identity
- -