Glac029740.1
Basic Information
- Insect
- Gerris lacustris
- Gene Symbol
- pnr
- Assembly
- GCA_951217055.1
- Location
- OX578279.1:70253610-70264189[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.83 7.9e+03 -1.8 0.0 15 26 50 61 46 64 0.76 2 2 2.7e-18 2.6e-14 54.1 5.7 1 35 338 371 338 372 0.97
Sequence Information
- Coding Sequence
- atgtCTTCTTTCCCGGCTAAGTTTTACGAACTTTGTCGACTTTGTTTATCCAGCGACGGCGCGAAGCTTCCTATATTCGACGATGTGGACCCTCAAGGAGGCTTTTCCAAGAAAATCGCGGCGTGTCTCCATTTACAAGTAAATGAAGAAGAAGACTTGCCTTCAATGGTGTGCTTGCCCTGTGTTGAAAAACTGGAACTGCTTTCAAGGTTTAGAGAAGAAGCTAATAGGACTGACGAGGCTCTTAGGCAGTATCTGGCAAATCCCGATAGTTTACCTGACAATCCATCAGAGGAGCTAAGAGTAATCCACACAGCATGCAGACAAGGTTATCGAAACGGAAGGTCCGGTGGAGCAGTGGTTGTAGTTAACGGAGAACTCGGTGGTTCAGGTGTCAGAAAATACGATGAGGCAGACGACGATGAATATGGCATGGGCTCACCTGCGCTTAGAAGTGATGAGGAATCATCATTACTCGAACCCCACACAGAAGTAACCGTATCGGATTCACCTCCTGACCACCATGCACAAATACTCTCCGACATTAATGTTAATAGAATGGGAGAAGCAAACAGCCTTCTTAGGACCTTGATGACAGCTCCCGAACATGCTGGTAAATCTGTAATTCTTATGAGAGAAGAAGTTCGGTGGCCTACCTCCAAAATCAAAGCAGAGGTGGTAGAAGCACGGAGTAGCAGTGGAAGGAGGAAGCAAAGTTGTCCTGTACGTTCATCGGATCCCTCGTGCTATGTAGACGAAGAAGTAGTTATAGACGGTAGGACCATAGTAAGCCCGGAGAGTTCTCCCCCGCGGCTAGGTAGCCCCGGCCCACGTGGTGGATATCTCCGTCCTGCTGAAGCCATATCTCGCCTTTTAGAAGCCGCCAACTATACAGATACCAATTCGTCTGCAGACGATTCACCCTCTTCTTGGAACTACGATTATCCAGCACCTGCAACACCCAGAAACAATCATCAAACCACAAGGGTACCCAAAAGGGTCGACTTGTGCTGTTCGAATTGCGGTACTCGTACGACGACAATATGGCGGCGAAACCCTAACGGGGACATGGTTTGCAACGCTTGCGGGTTGTACTACAAGCTACACAATGTGAACCGACCTGCTACCATGAGAAGGGATACGATACACACGAGACGCCGGAGACCCAAACAAGAGAAAGCGAGTAACCACGGTACGCCCACGCACCGAGTGTACACCCCTTCACAGCACCATACCACCATCAGTCAGTACTACATCATTACTGAACAATCTGACTAA
- Protein Sequence
- MSSFPAKFYELCRLCLSSDGAKLPIFDDVDPQGGFSKKIAACLHLQVNEEEDLPSMVCLPCVEKLELLSRFREEANRTDEALRQYLANPDSLPDNPSEELRVIHTACRQGYRNGRSGGAVVVVNGELGGSGVRKYDEADDDEYGMGSPALRSDEESSLLEPHTEVTVSDSPPDHHAQILSDINVNRMGEANSLLRTLMTAPEHAGKSVILMREEVRWPTSKIKAEVVEARSSSGRRKQSCPVRSSDPSCYVDEEVVIDGRTIVSPESSPPRLGSPGPRGGYLRPAEAISRLLEAANYTDTNSSADDSPSSWNYDYPAPATPRNNHQTTRVPKRVDLCCSNCGTRTTTIWRRNPNGDMVCNACGLYYKLHNVNRPATMRRDTIHTRRRRPKQEKASNHGTPTHRVYTPSQHHTTISQYYIITEQSD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00743365;
- 90% Identity
- iTF_00743365;
- 80% Identity
- -