Glac044227.1
Basic Information
- Insect
- Gerris lacustris
- Gene Symbol
- Mblk-1
- Assembly
- GCA_951217055.1
- Location
- OX578284.1:11220872-11231412[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.3e-17 4.5e-14 53.5 0.0 1 39 115 154 115 158 0.95 2 2 3.3e-18 2.4e-15 57.6 0.0 1 43 303 346 303 348 0.95
Sequence Information
- Coding Sequence
- ATGTCAGGTGAAAATCAAATTCCTGTGAAGATGCTTCTGGAATTTGGTAGCGAAACTTCAGTGgtGGGAAGTGGTGGAGGAGGTTTAGGAGGTATTTGGGAAGGCGACTGCAGTAGTTCGGGCTCATCGTCTCCAGGTACCATACCAGCATGGTTCATTAGACCACCGGAGTCACCTCCTGATCAACCTTTAGATCTCTCGGCAAAGTCCCGTCAAGATTCCAACAGTCCTGGACCGAGTTCTCAACCTTCGCCTTCTCCTTCGCTTAAATTACCAGCACTACCAAGGCATATATTCAAGGCCAAGCCGAGATTGTCAGCCGTACCTGGAAGAAGGACTTATACCGAGGACGAACTGCAGGCTGCACTGAGAGACATCCAAAGTGGAAAACTGGGCACGAGAAGGGCGGCCGTCATCTACGGCATCCCTAGATCGACGCTCAGGAACAAAGTGTACAAGCTGAGCCAGGAGAGACGGGACAAGGAGGaggaagaagaggaagaagaagaagacgaTGAGGAGAAAGAAGTGTTGGGCGAACTGAGGAAACCTTTGCTGTCCGTCGAAGATGTAGTGAGGTTAGCTGGAGATAACGCATTACCTTATCTGAATAGGATTGTAAGAGACAGAGACAGTATGCCCGAAGCGGTCAGGAGCATGATAGCCGAAGAAAAAAGGTTGGAGGCCGAGAGACGACCGGAAGATCTGCTGAGGGTGCCGTCTTTAAGAGGGTCGCCTCCCTCTTCGCCTGCCCTACCCCGTCCCCAGCCGGCCCCCACCCTCAACAATAACCACGACGAGAAGAAACCTTCCACCAGCAAGATGACAGCCAACCAAGCCGCAGCGGCGGCGGCGGCCGCTGGAGGTAAGGGCACCAGGCCGAAAAGAGGCAAATACCGCAACTACGACCGAGACAGTCTGGTGGAGGCGGTGAGAGCCGTTCAGAGAGGGGAGATGTCCGTACATCGGGCAGGTTCTTACTACGGCGTACCGCATTCCACATTAGAGTATAAGGTAAAAGAAAGGCATCTCATGCGACCGAGGAAACGAGAACCTAAACTGCAGAATTCTCTGCAGGAGGAGATAAAGAGGAAAGAAGAGGCAGATAAGAGAGCCGCTGCACAAATGGCGGCGAGAAGGTCGAGATTCCCACCACCCACTAACGGCCTCAAATTAGGTATACTTGATCCAACTATGTACCCGAGTTGGCCTGTGTGGCCTCCACATTGGACCGCATTAGAAACAGCTTACACTAGACCGGACCTATTTGGACAGCAAGCTCTTTACAGGCTTGCGGAGGAGCAAGCCGCGGCGTCCACATCCGCGGCGGCGGCAGCTGCTGCAGATGTGGCTGGACTGACCAAGGCTGCTCGGCGGGTAGCCGAACAACTGTACGACGGTACGGGAGAGAACGGTTCTTTCCTCGACGGAATCATCAGGTCGTCTCTTGAAGAGACACCGTCCGAAACCAACAAGCAGGCTTTGCTGGAGCACCTTGTCAAAGCGCAGCCCGTCGCGTCCCCCGCCGCCTCTTCGCAGCCCCCGTCCCCCGCATCAAGTGCCTGTGATAACAACAACAAACCTTCGTAA
- Protein Sequence
- MSGENQIPVKMLLEFGSETSVVGSGGGGLGGIWEGDCSSSGSSSPGTIPAWFIRPPESPPDQPLDLSAKSRQDSNSPGPSSQPSPSPSLKLPALPRHIFKAKPRLSAVPGRRTYTEDELQAALRDIQSGKLGTRRAAVIYGIPRSTLRNKVYKLSQERRDKEEEEEEEEEDDEEKEVLGELRKPLLSVEDVVRLAGDNALPYLNRIVRDRDSMPEAVRSMIAEEKRLEAERRPEDLLRVPSLRGSPPSSPALPRPQPAPTLNNNHDEKKPSTSKMTANQAAAAAAAAGGKGTRPKRGKYRNYDRDSLVEAVRAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKLQNSLQEEIKRKEEADKRAAAQMAARRSRFPPPTNGLKLGILDPTMYPSWPVWPPHWTALETAYTRPDLFGQQALYRLAEEQAAASTSAAAAAAADVAGLTKAARRVAEQLYDGTGENGSFLDGIIRSSLEETPSETNKQALLEHLVKAQPVASPAASSQPPSPASSACDNNNKPS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00742700;
- 90% Identity
- iTF_00742700;
- 80% Identity
- -