Glac031107.1
Basic Information
- Insect
- Gerris lacustris
- Gene Symbol
- kn
- Assembly
- GCA_951217055.1
- Location
- OX578280.1:13877306-13897779[+]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.5e-97 2.4e-92 311.8 0.1 249 388 30 169 21 177 0.95 2 2 2.3e-06 0.065 13.2 16.1 421 519 178 279 165 298 0.60
Sequence Information
- Coding Sequence
- ATGTTACCAGCAAGTACTGAAGGTTTTATTAGTAGCGTTGTAAATCTTTGTTCAGACGTAGTTTCAGGTCTCTATCCACCATTGCCTGTGGCCACACCATGTATAAAGGCAATATCACCTAGTGAAGGATGGACAAGTGGCGGTTCAACAGTCATCATCATCGGTGATAATTTCTTCGATGGACTTCAAGTCGTATTTGGAACCATGCTCGTGTGGAGTGAGttgATAACATCTCATGCGATCAGGGTCCAGACCCCTCCACGACATATCCCCGGTGTTGTGGAGGTGACGCTGTCATACAAGAGCAAACAGTTCTGCAAGGGGGCACCGGGAAGGTACGTCTATGTCTCATTGAACGAGCCAACAATCGACTACGGATTCCAGaggttacaaaaattaataccaAGGCATCCAGGAGATCCTGAAAGGTTACCAAAGGAAATAATCCTAAAGAGAGCAGCAGACCTAGCTGAGGCGCTATATACCATGCCAAGCCGAAGTAATTCCCAGCTAACTGCGAGATCACCGCCACCAGGCAATACCTTCAACTCTTCATATTCAGGCCAGCTGGCAGTCACTGTCCATGAAAATAGTGGCCAGTGGAGCGAAGAGGACTATGGGCGAGGACAGGCTGGTAGCGTATCTCCGAGGGGGTACGGTTCGGCCACCTCGACACCTCATTCTACGGGAGGCTCGACTAGTGGACAACCTCAAAACTACTCGACAAATGCTTTCACCTCACAAACACCTTCTTCTGTAGCCTCCTCTACCCCGGCCATATTCAACTCATCTTCAAGAGTAAGTGGTCTTGTATCTTCACCATTTTCAACAATGAATCCATTCGCCCTTCCGACCTGTAATTCCCAATCATACAGTCCACTTGTGGGATCTACCAAATAG
- Protein Sequence
- MLPASTEGFISSVVNLCSDVVSGLYPPLPVATPCIKAISPSEGWTSGGSTVIIIGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRYVYVSLNEPTIDYGFQRLQKLIPRHPGDPERLPKEIILKRAADLAEALYTMPSRSNSQLTARSPPPGNTFNSSYSGQLAVTVHENSGQWSEEDYGRGQAGSVSPRGYGSATSTPHSTGGSTSGQPQNYSTNAFTSQTPSSVASSTPAIFNSSSRVSGLVSSPFSTMNPFALPTCNSQSYSPLVGSTK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01009346; iTF_00742568;
- 90% Identity
- iTF_01009346; iTF_00742568;
- 80% Identity
- -