Glac030124.2
Basic Information
- Insect
- Gerris lacustris
- Gene Symbol
- JARID2_1
- Assembly
- GCA_951217055.1
- Location
- OX578279.1:80447900-80465265[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.7e-16 7.1e-13 50.4 0.0 30 89 2 59 1 59 0.93
Sequence Information
- Coding Sequence
- ATGGAAATAGACTTACCGCGGCTTTATCAGACTGTACAAGACTGCGGTGGGCTTAAAGAGGTGATGGAAAAGAAACGGTGGAATAAGGTCGCTGACTGCATGAAAATACCCAAACTATCTCAAGATAGAGCGACCAAACTCGATGACATCTACTGCAAATACCTCTTACCTTACGACACCCTGGCTCCTAATGTGAGAGACGGATTGTTGGAACAAGCTGAAAAGGACTGGCAAGAGAAGGAGAAGAAAATGCTTGCTGAAGCTGAGGAAGGATCTGAGAGTGAAGATGACTTCATGCTTGAATGCATCACCAAGGGGAGAAACATGCCTCTGAGTCAGTTCTACCGGATTGCTAGAAACACCATGTGCATGTGTTTCGGTAACGAAGGCCCGCCTGAGAATGAGAAAGTAGAAGCTGAATACTGGAACCATGTTACCGAGAGAACTAATCACCTGTGTGTCAACTCAGGTTCTATTGACTGCGGTACCTGGGGCTACGGGTTCCCTACAGCTAAGAACAGCACTACTGCTAAACACCCATGGAACCTTAAAGTTCTTACCAATCATCCTCAATCTGTCCTCAGATCTCTTCCTCCTCTCATGGGTGTAACAGTTCCAACACTGCATGTTGGCATGTTATTTTCTACCTTTTGCTGGTACCGGGATCCTCATGGCCTTCCATGGATTGAATACCTCCACACTGGAGCCAATAAAATTTGGTATGGTGTGCCTGATGAGTGGACCAATCAGCTTAGAGGCGCTATAAAATCAGTGTTACCAACTATCGTGCGGGAGAGTCCAGTATGGCTTCCCTCGGACACAGCTATGCTTTCACCTAAACTTCTCCTAGACAAGGGGGTCTCTCTTTGCAGGACGGTTCAAGAACCTGGACAGTTCATAGTCATATTCCCTAAAGCGTACACTTCAGCGTTCTGTACTGGGTACTTGGTATCTGAGAGTGTATACTACGCTCCTTCTAGCTGGCTTGCTACAGCAGAAGTCATGTTCAAGgaaGTGAAAGAGAGCTGTGAGCCGACAATGTTTTCTTTGGAGAAACTCTTGTTTTTCATTGCAAATGACGCAAGAACTTCTCTTAATATTCTACTACAGATTTGTCCTATGGTTGAAGCTGTGAGGAATAGAGAGGTGAAGGAGAGAAAGGATTTGCAGAAGCTTGGACTCGTGTCTTCAGAAAGACTTCCCAAGCCTGCTAAGAAAAGTAGCTACTCCCAGATGGAATACGAGTGCAACACATGCAGATCTAGTCTCTTCATATCCCTGGTAAGTGATTCTAACGAGGATGTAAACTACTGTTTATCTGATGCAGCTGACATGTTAACTAAAGAACCTGCTCAGCTTCCACACTGCAAGCTTCTCTACATGTATGACGAggaaGAGATGGAGGAACTTGttgataaagttaaaaataggaTTGATCAAAAGTCACAGAAGAAGAACTGCAAGGGCGGCTCCAATCCTGGGACTTCCAAAACTAAAACTTGA
- Protein Sequence
- MEIDLPRLYQTVQDCGGLKEVMEKKRWNKVADCMKIPKLSQDRATKLDDIYCKYLLPYDTLAPNVRDGLLEQAEKDWQEKEKKMLAEAEEGSESEDDFMLECITKGRNMPLSQFYRIARNTMCMCFGNEGPPENEKVEAEYWNHVTERTNHLCVNSGSIDCGTWGYGFPTAKNSTTAKHPWNLKVLTNHPQSVLRSLPPLMGVTVPTLHVGMLFSTFCWYRDPHGLPWIEYLHTGANKIWYGVPDEWTNQLRGAIKSVLPTIVRESPVWLPSDTAMLSPKLLLDKGVSLCRTVQEPGQFIVIFPKAYTSAFCTGYLVSESVYYAPSSWLATAEVMFKEVKESCEPTMFSLEKLLFFIANDARTSLNILLQICPMVEAVRNREVKERKDLQKLGLVSSERLPKPAKKSSYSQMEYECNTCRSSLFISLVSDSNEDVNYCLSDAADMLTKEPAQLPHCKLLYMYDEEEMEELVDKVKNRIDQKSQKKNCKGGSNPGTSKTKT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -