Glac031616.1
Basic Information
- Insect
- Gerris lacustris
- Gene Symbol
- ARID5B
- Assembly
- GCA_951217055.1
- Location
- OX578280.1:27818013-27831665[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.1e-26 1.3e-22 81.6 0.0 2 89 278 363 277 363 0.95
Sequence Information
- Coding Sequence
- ATGGCAAATGTATTGGAGgatgAGGTATTGGCTATCAGCGAAAAGGTAGTGCTTCGAGTAGACGATCTTCTAACATGGATTCATGTAGCCCCAGATTGGCACTGGGGTCAGAAAGCTGTTTGGTCAGGAGACGCCCTTCCTTCATTAGAGGTCAAAGAGGAAGTGAAGGAAGAAGTGGATCTTGACCAACCGAAAATTAACGAAGAACCATCTGAAGAGCAGAGAGTACAGCCTGCCATATGCACAGATCCTCCACTTTATCCGAAACATAAGTCTGTTGATATGGATGATGTACTTGCTGAAAAACAAAAACTCGgattAAGTCACTGGGAGAGTACACCTGGAGTGGTAGTTCTTTCTTTTGGTAGATATTGTAGATATAGGGGTTTGTTAAAGCGCTTAGAAGGAGTATATAACAAATGGTTAAGACACTCACTCGTACAGGCTCTCGGTGGATTTACTTCTCCCTTCAAGAATACCAGGATACTCTTCTGCAAGGATACATTCGACTACCCAGAACTTGAGGGACATGAACTCCTCTGCAACCACCTTGCTCCGAAATTGAAAGGAAAGAATGccaataaaagaaagaagaaggaaatatcAGCTAGTGAAGAAGATGAGGATTCAGAGTCGGATTCATGTGAGAGTTCTGCTTCTAGTGCATCTTCATCTAGTAATAAACCTGCATTACAGATTAAAGCAGTAGGTGTGAAGCCAAGATTGCGCTGTACTCTGGAGGTTGGCAATCGTATTTATACTCCAGGTCCTACCACAATACTAAATCTCAGCTCCGGTCTGGATGGAATTAAGAACACCACTCTTATGGACGAGAAGAAATTCCTTCAGGGTTTGCATGCGTATATGAGAGCGAGAAATACTCCTATAGGAAGGATACCTGTAGTAGGCTTTAAAGAAGTGAACCTTTACAAGCTTTATAGAAAAGTAATTGAATTTGGAGGATATGATGTGGTTACAAATAATAAGATGTGGAAACAAGTCTACCAGGTTACCGGCGGAGATATGTCTTGCACTAGTGCTGCCACCCTTTCAAGAAGACATTACGaaaaGTTGCTATTGCCATACGAGAGGTTCTTGAAGAATAAGGCGTCAACTCTTGTCATTCCATCTTCATATTCGCTATCACACCATGCTAGAATAGCACAGTTAAGTGGAGCGGTAAAGATATCACCTCTTAGAACAGGAATGGTTCAAGGCAAGACGTTGCTACAAGTTAAGACTGAGAAGCCTCGTGAGAAGGAGAACATACCAGAGAGAATGAAGAGGCCTCCTGAAGCTATGCTTAACTCCAGTGTTACCATCATTAAGAAAGAAATGAAAGAAGAGGTTGACTTAGTCTCACCTGACACATCACCTGTCAAGccCATAGTCACAATCAAACCAGCTCCAGTTAAGAAGCAGAAGTTAGACATGCTGAAACAGGGAGGACTTGAAGTGACTGCAGTCGCTCTCGGTGGGGGTCCTGGGTTCCCTTCCAAGAGCGAAACCACATCAAATGATGATAAAGCCCTGATAAAGAAGGAGCAGAGAACCACTCCGCCTCCTAACACaaagaataacaataaagtatctATAACTGTTACTCCTGATATTTGTCATCTTGGTGGAGGCAATAGCAGTGCTAGTAATGGAGCAGGTGGTAGTAATGGTAATAAGGTTTCTATAACTGTTACACCGGATATGTCTCATCTGATGTACCCGTGGGGTGTTATGAACGTCAATGGCCCTGGTACTAGTAAACAGAAATCATCTAGTACCAGTACTGTGGTTTATGGAGCGGGTAGCGCTGTCGGTCTTCCTGTAGAAGCAGTTTTAGGTGGACAACCTGCACCCTCAACATCAGCACCTATTGACTTAAGAACGACCAAAGCTAAAAAACCTAACATCGGATCCAACTTAGAAATAAGTCTGATACCTTCGGGCGTTAAAAAGTCAGCAATTCAAAACCCGAATGTCCGTACAAATCAGAGAGCACCTCAGAGATACAACAATCCTCGCTTTAACTCTCCGATTTACACCTTAAAAACTTCACCTAACGCTGCACCTTATGTACCTCTAATAGATCCGGCATACCTCTGCGGGAACATCGTCACTCAGAAACTGCCTCAGTTTACTGCACCGAACCCCGCCACATCTTCACCTGCTTCCATCAACAGCTTCTACAAGGATCTACTTCGCTCTCAgggtatttttaatcttttacctGATGGGTCTACTTCCATTTCACTAGTTGGGGGTCAGTCGACCCCTACTTCCAAatga
- Protein Sequence
- MANVLEDEVLAISEKVVLRVDDLLTWIHVAPDWHWGQKAVWSGDALPSLEVKEEVKEEVDLDQPKINEEPSEEQRVQPAICTDPPLYPKHKSVDMDDVLAEKQKLGLSHWESTPGVVVLSFGRYCRYRGLLKRLEGVYNKWLRHSLVQALGGFTSPFKNTRILFCKDTFDYPELEGHELLCNHLAPKLKGKNANKRKKKEISASEEDEDSESDSCESSASSASSSSNKPALQIKAVGVKPRLRCTLEVGNRIYTPGPTTILNLSSGLDGIKNTTLMDEKKFLQGLHAYMRARNTPIGRIPVVGFKEVNLYKLYRKVIEFGGYDVVTNNKMWKQVYQVTGGDMSCTSAATLSRRHYEKLLLPYERFLKNKASTLVIPSSYSLSHHARIAQLSGAVKISPLRTGMVQGKTLLQVKTEKPREKENIPERMKRPPEAMLNSSVTIIKKEMKEEVDLVSPDTSPVKPIVTIKPAPVKKQKLDMLKQGGLEVTAVALGGGPGFPSKSETTSNDDKALIKKEQRTTPPPNTKNNNKVSITVTPDICHLGGGNSSASNGAGGSNGNKVSITVTPDMSHLMYPWGVMNVNGPGTSKQKSSSTSTVVYGAGSAVGLPVEAVLGGQPAPSTSAPIDLRTTKAKKPNIGSNLEISLIPSGVKKSAIQNPNVRTNQRAPQRYNNPRFNSPIYTLKTSPNAAPYVPLIDPAYLCGNIVTQKLPQFTAPNPATSSPASINSFYKDLLRSQGIFNLLPDGSTSISLVGGQSTPTSK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00742559;
- 90% Identity
- iTF_00742559;
- 80% Identity
- -