Basic Information

Insect: Gerris buenoi
Gene Symbol: -
Assembly: GCA_001010745.2
Location: KZ653845.1:42516-50356[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.62 85 5.5 0.1 1 19 31 49 31 52 0.88

2 13 1.2 1.7e+02 4.5 1.0 2 14 60 72 59 78 0.88

3 13 0.079 11 8.3 0.2 3 21 539 557 538 558 0.94

4 13 0.0025 0.34 13.0 0.3 2 20 570 588 569 590 0.92

5 13 2.2 3e+02 3.7 3.7 1 20 594 613 594 615 0.90

6 13 0.5 68 5.7 0.1 1 19 622 640 622 643 0.88

7 13 1.2 1.7e+02 4.5 1.0 2 14 651 663 650 669 0.88

8 13 8.8 1.2e+03 1.8 0.4 2 12 1142 1152 1141 1154 0.89

9 13 0.079 11 8.3 0.2 3 21 1933 1951 1932 1952 0.94

10 13 0.0025 0.34 13.0 0.3 2 20 1964 1982 1963 1984 0.92

11 13 2.2 3e+02 3.7 3.7 1 20 1988 2007 1988 2009 0.90

12 13 0.5 68 5.7 0.1 1 19 2016 2034 2016 2037 0.88

13 13 1.2 1.7e+02 4.5 1.0 2 14 2045 2057 2044 2063 0.88

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.62	85	5.5	0.1	1	19	31	49	31	52	0.88
2	13	1.2	1.7e+02	4.5	1.0	2	14	60	72	59	78	0.88
3	13	0.079	11	8.3	0.2	3	21	539	557	538	558	0.94
4	13	0.0025	0.34	13.0	0.3	2	20	570	588	569	590	0.92
5	13	2.2	3e+02	3.7	3.7	1	20	594	613	594	615	0.90
6	13	0.5	68	5.7	0.1	1	19	622	640	622	643	0.88
7	13	1.2	1.7e+02	4.5	1.0	2	14	651	663	650	669	0.88
8	13	8.8	1.2e+03	1.8	0.4	2	12	1142	1152	1141	1154	0.89
9	13	0.079	11	8.3	0.2	3	21	1933	1951	1932	1952	0.94
10	13	0.0025	0.34	13.0	0.3	2	20	1964	1982	1963	1984	0.92
11	13	2.2	3e+02	3.7	3.7	1	20	1988	2007	1988	2009	0.90
12	13	0.5	68	5.7	0.1	1	19	2016	2034	2016	2037	0.88
13	13	1.2	1.7e+02	4.5	1.0	2	14	2045	2057	2044	2063	0.88

Sequence Information

Coding Sequence: ATGCACCCCATTTGTCTCAAGTGCAATAGACATTTTACCCTTGATAAGAACAGAAAAGGGCACGAAAAACTGTGTGGTGGAATTCAAACATTCGAGTGTGTGAATTGCGGAGAAAAGTTTATTGATTTGGAACATAAATTAGATCATGAAATTAGATGTAACACCCCATATAGTAAAAAGTGTAGTAAATGCAATCATGTCTTTACAAATAGACGTCTGCACTTGAGTCATGAGGAAGTATGTGGTGATGTTCCATCTACTTCAAGACTGGGTGAACCGTCAACTCGTGAGCTTATTTCGGTTAGACCAAATTCTGATCTAGTACAGGAGTATGAAAGTGCATATCAGGGGcgattaaaatcatattttattcgcTCTAACGATAATCAAAGCCTGAGTGCATTTTTTGACTCCGTTTTAGATCGAGTGGTGGGACTTTTAAAGAGAGCTCTGGTATTACTACGAGCTCTAAAAGTAAACTTTGTTGTGGATTGCAGCTTTTCTAATATCCATGGCGAAAGgatggattttaattttaaaacctcgAATACTCCGGTGGATATGGGTACAAACCTAGAAGAGTTTGCAAGGTTGCAATTTAGACACATGACAACTGAAATGGAGGAGGGTCAACTGCAAAAAAGTAGTTGGATGCTAAATGGTGTAGATGGCCtgagagtaaaaattaataaatacgatCCTTTACTCGGGTCATCCTACTTACCTCTCCCCAAATCcatttctaacaaaaaagccgtgataaattttcaaaatgatgaCCAAATGTGCTTTAAATATGCAGTCCTTACCAAGCTCTTAGGAAAGGAATATCCCCGGAGCAAAAATCAATTCGATTTAATCGAGCATAGCTATGATTTTAGTTTCATTGAATTCCCTCCCTCCGCCATGGATATTACTaggtttgaaaatataaataacatctctataaatatttttgggcttgaaaatgataaaatatgtcATCTAAGGCTCACGGAGAGGGAAAGGGAGGATCATAGAGATCTGCTTTTATTAACTGAGAAACTATGTGCAAACCCACTATCGGCTTCATGTACTTTCGAGGTTAAAAAACATTTCGCATATATTAATGATCTTTCCCGTCTCGTAAGCTCTCAAATTTCCAATCATAACGGGAAATTACAATTCTGCAAACGGTGTCTCACGCATTTTGGGGGTATGAACTCGAAAACGCCAACAGATCAGTTTAGGGACCATGCTAATCTGTGCAACCTAAACAAGCCGGTAAGAGCGGACTTACCACTCAAAAAACCTTATGTTGAATTTTCTAGCTATGGTAAACAGATTCGCATGCCCTATGTTGTATATGCCGACTTTGAGAGCATTCTTACTCCCATTAATGGGTGTACACCTTCGCCTTCATCATCATTTTCAACCCCATACCAGGTNtattttttattttttatttttatttttatttttacaggattATGTCAACATTGCGGGGTGTGGATGGGACACTCTCTCACTGAGCACGAAGAGGCTTGTAGGAGTCCATCAATCGTCCCATCTTATCAAGTAGGGGAGGGTTTAACCTCTGAGCCATCTTCACATCGGGGCAACTCGAGTAAGCTATGCAATCGCTGCGGAGTAACTTTCGAGTCTGTTAAGGACCTTATGAAGCATGAAAAATCATGTAGAGGGGTTTCTGCTATTAGACCTCTCCTTAAATGTTCTACATGCCCGAAGGTTTATAAAACACTGAAATATTTACGAGCTCATGAGTTACGATGCACCCCACACATTTGTACCAAGTGCAATAGACATTTCACCCTTGATAAGAACAGGAAAAGGCACGAAAAACTGTGTGGTGGAATTAAACAATTCGAATGTGCGAATTGTGGAGAAAAGTTTATTGACTTGGAACATAAATTAGATCATGAAATTAGATGTAACATTCCATATagtaaaaaatgtagtaaatgcAATCATGTCTTTACAAATAGACGTCTGCACTTGAGTCATGAGGAAGTATGTGGTGATGTTCCATCTACTTCAAGACTGGGTGAACCGTCAACTCGTGAGCTTATTTCGGTTAGACCAAATTCTGATCTAGTACAGGAGTATGAAAGTGCATATCAGGGGcgattaaaatcatattttattcgcTCTAACGATAATCAAAGCCTGAGTGCATTTTTTGACTCCGTTTTAGATCGAGTGGTGGGACTTTTAAAGAGAGCTCTGGTATTACTACGAGCTCTAAAAGTAAACTTTGTTGTGGATTGCAGCTTTTCTAATATCCATGGCGAAAGgatggattttaattttaaaacctcgAATACTCCGGTGGATATGGGTACAAACCTAGAAGAGTTTGCAAGGTTGCAATTTAGACACATGACAACTGAAATGGAGGAGGGTCAACTGCAAAAAAGTAGTTGGATGCTAAATGGTGTAGATGGCCtgagagtaaaaattaataaatacgatCCTTTACTCGGGTCATCCTACTTACCTCTCCCCAAATCcatttctaacaaaaaagccgtgataaattttcaaaatgatgaCCAAATGTGCTTTAAATATGCAGTCCTTACCAAGCTCTTAGGAAAGGAATATCCCCGGAGCAAAAATCAATTCGATTTAATCGAGCATAGCTATGATTTTAGTTTCATTGAATTCCCTCCCTCCGCCATGGATATTACTaggtttgaaaatataaataacatctctataaatatttttgggcttgaaaatgataaaatatgtcATCTAAGGCTCACGGAGAGGGAAAGGGAGGATCATAGAGATCTGCTTTTATTAACTGAGAAACTATGTGCAAACCCACTATCGGCTTCATGTACTTTCGAGGTTAAAAAACATTTCGCATATATTAATGATCTTTCCCGTCTCGTAAGCTCTCAAATTTCCAATCATAACGGGAAATTACAATTCTGCAAACGGTGTCTCACGCATTTTGGGGGTATGAACTCGAAAACGCCAACAGATCAGTTTAGGGACCATGCTAATCTGTGCAACCTAAACAAGCCGGTAAGAGCGGACTTACCACTCAAAAAACCTTATGTTGAATTTTCCAGCTATGGTAAACAGATTCGCATGCCCTATGTTGTATATGCCGACTTTGAGAGCATTCTTACTCCCATTAATGGGTGTACTCCTTCGCCTTCATCATCATTTTCAACCCCATACCAGGTGCATTCTCCAATGTCATTTTGTATTTATGTGAAACCGTCGATTGAGGTACAGCACCTACCGGTACCTTTTTCTTTGGATCCATATGTATATAGAGGCGAGGATGCTCCTACGAAATTTATGGAGTATTTAACTGAGGTGGCAAAGGGGTTGGATCCAATTTATGATAGTATAGTCCCTTTATTTATGACCGATAGAGATAATTTAGCGTTCCATACCGCAACTAAGTGTTGGTTATGCTCGAAACCTTTTTCTACCGATTCCCCTGCTGTACGTGATCATGACCATTTGACCGGATGTTTCAGAGGGGCAGCCCATAGTGAATGTAACATATTAGCCAAATCCCCAAAATTTCTCCCGGTTTTTATCCACAATTTAAGCGGTTACGATTCACATTTCTTGATTCGTGAACTCGGCGGTGACGAAAGCCGAGTAAATATTATCCCTCAAACttcagaaaaatatatttccttttcaaaacaaattaaaaatattactctcCGCTTTGTTGACTCCTTTAGATTCATGGGCTCTAGTCTTGAGCAGCTTGTAGATAATTTGCCCTCACCCGCCTTTAAAAACATGGCAAAGTATTATTCGGGTGAGAGGCTAGAGCTTATGATGAAAAAGGGGGTCTATCCATATGATTTCGTTGATTCGTGGGAGAAACTAGACGAAACATGTCTTCCATCAagggaaaatttttttaataaattatgccAGCTAGAATGTAGTGAAGGAGATTATAGTCATGCACAAAAAGTGTGGAAAGCATTCGAGTGTAAAACTCTTGGCGACTATGCGGATCAGTATGTGAAGTCAGATGTGCTTCTTTTAAGCGATGTTTTTGAAGCATTTAGAGAGGTAACTCTGGCCACTCATAAACTTGATCCTGCATGGTATTACACCGCCCCTGGTATGACGTGGGATGCAATGCTAAGATTCACTGGTGTCCGACTCGATCTCCTTACTGACTATgacatgatattattaattgagAGGGGTATTAGAGGAGGTATGTGTAGTGTTATGCATAGACGTGCTAGTGCTAACAATAAATATCTAGAATCGTACGATTCAAGCAAGCCTAGTACCTACATATCATACCTAGATGCCAACAATCTTTATGGTGATGCGATGTCTCGGCCGCTTCCAACTGGAGGGTTTGAATGGGTCGATTATCCGGAACAGATCGACATTCATTCGCTCCAGGAGGAAGATACATACGGCTACATCTTAGATGTTGACATCGAGTACCCCTCGAAATTACATCGTCTACATTCAGATTTTCCGTTTCTCCCCGAGTCCATTGTCCCTCCCTCTGAAACACTAAATTCAACCCCCAAATTAATCCCCCACTTAGGCCCCAGAAAAAATTATGTTGTACATTATATGGCTCTAAAACAAGCTTTATGTCacggtttaattttaaaaaaaatccatcgaGCTGTAAAATTCTTGCAGTCTCGGTGGTTAGAgccatatattaaatttaacacctcCCTCAGACAGAATGCCCGTAATTCCTTTGAAAAAGACCAATTTAAACTTTACAATAATAGCGTTTTCGGGAAAACAATGGAATCCGTACGTAAACGTCAGAGTATTAGACTAGTGACAACAGAAAAGCAAGCGGCTAggcttataaataaatttcattttagggATAGAATCATCATGTCGGAGAACGTGGTTCTATTCCGAATGGAGAAGACCAACATCCTTTTCGATAAGCCTAGCTACGTCGGTATGGCCATTTTAGATTTGTCGAAGACGGTTATGTATGGGTTCCATTACGATGTCATACAACCCCGCTACGGTATGGAACGTCTACAGTTGCTTTATACCGATACTGACTCGCTTATTTACCATGTAAAGACGGAGGATCTGTTCTGGGATATGTTCAATATGAGTAAACATTTTGACTTTTCAGACTATCCACCCGATCACCCTAATTTCTCCTTGACAAATAAAAAGGTCTTGGGGAAATTTAAGGATGAAGCTAACGGGAAAATAATCTCGGAATTCGTTGGCCTAAAACCGAAATTATATTCTTTGGTGGTTGACGGTCAAACAAAAAAACGAGCCAAAGGTGTGGTGAAATCTACCCTTAGGGAGATAACTTTTGACGACTACATCAATTGCTTAAATAAGCAAAAGGCAATGTTCTCTATAATGCGGAATATTCGATCGAAAGATCATATAGTTCGCAGTATAGAGAGCAATAAGGTGTCCTTATCTCCCTTTGACAACAAGAGGGTAATTTTACCCGATGGCATAACAACCCGGCCTTACGGCTTCATCAATGATCTTTCATCGATAATCGATGAACTTGAAGTGTTTACTCATATTGATCATATCAggttatgCGTCTTTTGCGGTGTGACGGATAGATCTCCTAGAAGCCATGAGTGTTCTGATCAAATTGAACACCCGATAATTAATAATGgattATGTCAACATTGCGGGGTGTGGATGGGACACTCTCTCACTGAGCACGAAGAGGCTTGTAGGAGTCCATCAATCGTCCCATCTTATCAAGTAGGGGAGGGTTTAACCTCTGAGCCATCTTCACATCGGGGCAACTCGAGTAAGCTATGCAATCGCTGCGGAGTAACTTTCGAGTCTGTTAAGGACCTTATGAAGCATGAAAAATCATGTAGAGGGGTTTCTGCTATTAGACCTCTCCTTAAATGTTCTACATGCCCGAAGGTTTATAAAACACTGAAATATTTACGAGCTCATGAGTTACGATGCACCCCACACATTTGTACCAAGTGCAATAGACATTTCACCCTTGATAAGAACAGGAAAAGGCACGAAAAACTGTGTGGTGGAATTAAACAATTCGAATGTGCGAATTGTGGAGAAAAGTTTATTGACTTGGAACATAAATTAGATCATGAAATTAGATGTAACATTCCATATagtaaaaaatgtagtaaatgcAATCATGTCTTTACAAATAGACGTCTGCACTTGAGTCATGAGGAAGTATGTGGTGATGTTCCATCTACTTCAAGACTGGGTGAACCGTCAACTCGTGAGCTTATTTCGGTTAGACCAAATTCTGATCTAGTACAGGAGTATGAAAGTGCATATCAGGGGcgattaaaatcatattttattcgcTCTAACGATAATCAAAGCCTGAGTGCATTTTTTGACTCCGTTTTAGATCGAGTGGTGGGACTTTTAAAGAGAGCTCTGGTATTACTACGAGCTCTAAAAGTAAACTTTGTTGTGGATTGCAGCTTTTCTAATATCCATGGCGAAAGgatggattttaattttaaaacctcgAATACTCCGGTGGATATGGGTACAAACCTAGAAGAGTTTGCAAGGTTGCAATTTAGACACATGACAACTGAAATGGAGGAGGGTCAACTGCAAAAAAGTAGTTAG
Protein Sequence: MHPICLKCNRHFTLDKNRKGHEKLCGGIQTFECVNCGEKFIDLEHKLDHEIRCNTPYSKKCSKCNHVFTNRRLHLSHEEVCGDVPSTSRLGEPSTRELISVRPNSDLVQEYESAYQGRLKSYFIRSNDNQSLSAFFDSVLDRVVGLLKRALVLLRALKVNFVVDCSFSNIHGERMDFNFKTSNTPVDMGTNLEEFARLQFRHMTTEMEEGQLQKSSWMLNGVDGLRVKINKYDPLLGSSYLPLPKSISNKKAVINFQNDDQMCFKYAVLTKLLGKEYPRSKNQFDLIEHSYDFSFIEFPPSAMDITRFENINNISINIFGLENDKICHLRLTEREREDHRDLLLLTEKLCANPLSASCTFEVKKHFAYINDLSRLVSSQISNHNGKLQFCKRCLTHFGGMNSKTPTDQFRDHANLCNLNKPVRADLPLKKPYVEFSSYGKQIRMPYVVYADFESILTPINGCTPSPSSSFSTPYQVYFLFFIFIFIFTGLCQHCGVWMGHSLTEHEEACRSPSIVPSYQVGEGLTSEPSSHRGNSSKLCNRCGVTFESVKDLMKHEKSCRGVSAIRPLLKCSTCPKVYKTLKYLRAHELRCTPHICTKCNRHFTLDKNRKRHEKLCGGIKQFECANCGEKFIDLEHKLDHEIRCNIPYSKKCSKCNHVFTNRRLHLSHEEVCGDVPSTSRLGEPSTRELISVRPNSDLVQEYESAYQGRLKSYFIRSNDNQSLSAFFDSVLDRVVGLLKRALVLLRALKVNFVVDCSFSNIHGERMDFNFKTSNTPVDMGTNLEEFARLQFRHMTTEMEEGQLQKSSWMLNGVDGLRVKINKYDPLLGSSYLPLPKSISNKKAVINFQNDDQMCFKYAVLTKLLGKEYPRSKNQFDLIEHSYDFSFIEFPPSAMDITRFENINNISINIFGLENDKICHLRLTEREREDHRDLLLLTEKLCANPLSASCTFEVKKHFAYINDLSRLVSSQISNHNGKLQFCKRCLTHFGGMNSKTPTDQFRDHANLCNLNKPVRADLPLKKPYVEFSSYGKQIRMPYVVYADFESILTPINGCTPSPSSSFSTPYQVHSPMSFCIYVKPSIEVQHLPVPFSLDPYVYRGEDAPTKFMEYLTEVAKGLDPIYDSIVPLFMTDRDNLAFHTATKCWLCSKPFSTDSPAVRDHDHLTGCFRGAAHSECNILAKSPKFLPVFIHNLSGYDSHFLIRELGGDESRVNIIPQTSEKYISFSKQIKNITLRFVDSFRFMGSSLEQLVDNLPSPAFKNMAKYYSGERLELMMKKGVYPYDFVDSWEKLDETCLPSRENFFNKLCQLECSEGDYSHAQKVWKAFECKTLGDYADQYVKSDVLLLSDVFEAFREVTLATHKLDPAWYYTAPGMTWDAMLRFTGVRLDLLTDYDMILLIERGIRGGMCSVMHRRASANNKYLESYDSSKPSTYISYLDANNLYGDAMSRPLPTGGFEWVDYPEQIDIHSLQEEDTYGYILDVDIEYPSKLHRLHSDFPFLPESIVPPSETLNSTPKLIPHLGPRKNYVVHYMALKQALCHGLILKKIHRAVKFLQSRWLEPYIKFNTSLRQNARNSFEKDQFKLYNNSVFGKTMESVRKRQSIRLVTTEKQAARLINKFHFRDRIIMSENVVLFRMEKTNILFDKPSYVGMAILDLSKTVMYGFHYDVIQPRYGMERLQLLYTDTDSLIYHVKTEDLFWDMFNMSKHFDFSDYPPDHPNFSLTNKKVLGKFKDEANGKIISEFVGLKPKLYSLVVDGQTKKRAKGVVKSTLREITFDDYINCLNKQKAMFSIMRNIRSKDHIVRSIESNKVSLSPFDNKRVILPDGITTRPYGFINDLSSIIDELEVFTHIDHIRLCVFCGVTDRSPRSHECSDQIEHPIINNGLCQHCGVWMGHSLTEHEEACRSPSIVPSYQVGEGLTSEPSSHRGNSSKLCNRCGVTFESVKDLMKHEKSCRGVSAIRPLLKCSTCPKVYKTLKYLRAHELRCTPHICTKCNRHFTLDKNRKRHEKLCGGIKQFECANCGEKFIDLEHKLDHEIRCNIPYSKKCSKCNHVFTNRRLHLSHEEVCGDVPSTSRLGEPSTRELISVRPNSDLVQEYESAYQGRLKSYFIRSNDNQSLSAFFDSVLDRVVGLLKRALVLLRALKVNFVVDCSFSNIHGERMDFNFKTSNTPVDMGTNLEEFARLQFRHMTTEMEEGQLQKSS*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -