Basic Information

Insect: Gerris buenoi
Gene Symbol: -
Assembly: GCA_001010745.2
Location: KZ651086.1:341661-345116[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.017 2.3 10.4 4.8 3 23 234 255 233 255 0.93

2 9 0.021 2.9 10.1 3.6 2 23 328 350 328 350 0.94

3 9 6.6e-05 0.0089 18.0 3.4 1 23 521 544 521 544 0.96

4 9 0.036 4.8 9.4 0.6 3 23 623 644 622 644 0.96

5 9 0.062 8.5 8.6 4.5 3 23 727 748 726 748 0.97

6 9 0.029 3.9 9.6 2.2 2 23 762 784 761 784 0.94

7 9 8e-05 0.011 17.7 0.4 2 23 829 851 829 851 0.94

8 9 0.29 40 6.5 0.6 1 23 936 958 936 958 0.97

9 9 0.19 26 7.1 2.4 2 23 1046 1068 1045 1068 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.017	2.3	10.4	4.8	3	23	234	255	233	255	0.93
2	9	0.021	2.9	10.1	3.6	2	23	328	350	328	350	0.94
3	9	6.6e-05	0.0089	18.0	3.4	1	23	521	544	521	544	0.96
4	9	0.036	4.8	9.4	0.6	3	23	623	644	622	644	0.96
5	9	0.062	8.5	8.6	4.5	3	23	727	748	726	748	0.97
6	9	0.029	3.9	9.6	2.2	2	23	762	784	761	784	0.94
7	9	8e-05	0.011	17.7	0.4	2	23	829	851	829	851	0.94
8	9	0.29	40	6.5	0.6	1	23	936	958	936	958	0.97
9	9	0.19	26	7.1	2.4	2	23	1046	1068	1045	1068	0.96

Sequence Information

Coding Sequence: atggcaTCCGCATTAATTCAGATGAGTTGTCCGGATATAAGAAATGCTCTTATTCACGGGATGGAATCAGTTGGCTACGAAGATTCGATGTCGGACTCTGACGGAAAAAGGCGCAATTCGGACCAAGACGACACCGACCGAGGTCAAAGTAAAAAGCGGAGAAAACAATCTAACCCGATAAGAATAACTAACGCCGAACCTACAGGCCAAGTAGacttgaaaatgaaaaataaatctgaaaacaattgtaataaaatcattgcCGACGTTGGTTTAGCGAGTAAAATGGCAGAGGAGAATGTGAGCTCAGGTTCGCCCACGAACGACGATACCGTGGATACTACTGCCAGTTACAGGACCTACATGCCGGGGAAAGAAAAAGTCTTGGACAATAGCTTCAAGAGTGCGACAAGCGACTTGATCTTCCCTCTGAACCTTTCCAGTTTAAAAGCTTCACCTAAGGAAACAACGGACTCCCTGATGGACGACAAACAGTGGTATAAAATGCGTGAAGGGAGAAGCCTGTTTTCTGTCCCGCCATTAGATCCTTTGAAGGTAAAAAGCCATTTCTTTCAAAACAACATCTTGCTTCCTCCGCAGTCTCCGACGCTGGCGTTACCTAGCCTTAAGAGAATCATGGTGGGTAACAATGAGATACCGGTTAATCCTTCGCACAGAATATTTAACCCCGAAGCGTTTTGTGATCTATGCAACAAAGAgttctgtaataaatattttctaaaaacacatCGGGCTAATAAGCACGGCATTTATTCTGAGAACACCGGTTCCAATCTAATGGATAATTTGTGTACTTTACCCATTACAAATTAtttgtctaataataataacaacaccaacaacaacaacaataatggGTCCTTGGCTTCTACTAGTCCTATTTGTCCTTTGATCGGCAAGAAACCAATGCAAACATTGGCAAACACTCAGGCGAAATCCAATAGCGGGAGTATGAGAGCTTACTGCAACATTTGCCAACGGGAATTTTGCAACAAATATTTTGTTAGAAGACATAAAGCTAAAATTCACGGGATAGTCGACCACCAGTCCGATGAAAGCCAAGATCAAAAATCCCACTTGTTTCAGGAAAAAAACGATTCCAGCGTTATAGATTTGAATCTGCCAGGACCTTCGTCATCTAAATCAGTAAGCCAGATCGTCAAAGACCCTTCAGTGGAAATATCGGATGAAAGGGTATGTATCAAAAGAGAACTGGACTTGGATATTGAAGACCCGTACAATTCTCAATCTTCTCTTAAGTATTTAGTGTCTTCGTGGAATAATGAAGATGTCGGAGACTCTTCCACTTCTCCTGATAGATTAAAGAAATCTGGCTCCTCTAGTAATTCTGCATTCTGTGACATTTGCTGTAaggaatattgtaataaatatttcttacgtATCCATAAACAAAAATGCCATAGTAGCTTAAGCCAAGAGAAAGAAGACAATCCCCTACCTTCAGAAACCCCGAACTCAGGGGATTCTCCTCTAAACTTAATTCTTCGAGAGATTCACAAAGAACCTGAAACTATAGACTTCTATTGTAAAGTGTGTCATAAAACCTTTGCTACTCAAATACTGTTAAATAAGCATTATGAAAAAATGCACGAAGATAAATGCTGCGACAACAGCTCCACACAGATAAACAGTCTTATCTCAGAACAGCAGCAGATTAATAGCAGAAGTAATCAGGGTAATCGTTCCATATCCGATGGTAGTTCGGACTCTATGTCTGAAACACAAATGGAAACTTATCACACTAGCACCATCCAATCTGACGTACAAAAAATACATTCCATGATAACGAAAATGAACCATTCCGAAGCAAAAGACTATTCGTTTTGCGAAATCTGTCTTAAAGATTTCCACCAAACTGGTCTCCTGGAAAATCATATCATCAGGGAGCATTCCTCTTTAGTAGAAGACATGGGAAGTAGTTTTGACGacgaaaatatatattcataccCCGAAGGCTCGAAATATGACATTGAAAAATCGCCCAGAAATTCAAACCTCTCTAACTTCACAGAAGAAGTGGTTAGCACTGATCAACGTCCCAACGACCCAAATTCCCAGTTGAAGAACGGTTTGGAAAATATCGAAAATTCAAGTAACGGTGACCGTCAAGCCTTAAGCACACCCACCAGTAGTTTTTGCGACATCTGTAAAAAAGaactttgtaataaatattttatgaaaacccACATGCAGAGGATGCATGGTATATCTATAGAAAACGGCGCTCAGCTCGGAGGCGTCATGTGTGAAATTTGCAACAAAGAATTATGTAGCAAGTACTTTCTGCGCGTCCATAAACAAAATTCCCATGGGATCGTGGATGAGAATTTTCTCCCTCAGATCGGAGGGAACGACATCAAACTGTCGGTAAGCACAGAGCTgccattaaaaacaaaagaaacggCCGAAATCAACAACCGTTATTTCACCCATTTTGCAGAAGTGTGCTCTATATGTGGAAGGAGATTCCGCAGCACTAAGTGGTTAAAGGCGCATTTGTTAAATGATCACGGCGACGAAGGCAAGAACAAGTGGAAAGAGGTTCAGGCTTTGACCGGTCACAAGGCGAGCGATAAAACACCGACTGAACCTTCCAAGAAAGCCGCATTTTCtcctttgtataatttaaacatgTCCTCAACCGAACCGGATGTAACCGATTTGCGAGTGAGTACTTCTGACTTGTTTAAATCAGATCGATGTAATATAGAAAAACAAAGCGATCtagttactaatattttaaacaaaaataataccaaATTGTATAAATGTTcgtattgttatttttctacGCCTATATTAGCTTTACTATTTATACATGAGAGAAACCACGTTCCCGGCACAAACGAAGCTTTAAGATGCCCCATTTGCTTCTTAGTTTGTGAAAGTAGTGAATTCCTAGACAAGCACGTCTGCTGCCATCGTCAGCAGTCTGAGGAGCCACCAGAAGAGGAGAGGAATACACCGATCAGATACCCCACTCCGATAGACTACAGCTCGCATGACAATATTCCTTCCAAACAACCCTTGACCGACCCCACTATTCCCGAGGACAAGTTCAGTGATAGATTCCCTCATTCGCAAGTATCTCTGAAATGTCACAAATGCTCTTACCTGACAAACGACGTGGATAGTTTTTCTCGACACATCAAATCCGACCATTCCACCGAAGTGACAGACGGTGAAAGTATAAGCCTGGTTAGCGAGATTCTTGTGAAGACTTCTAGCAATACCTCTATCCCGGCTTCTTTCGCCGTGCCGGGCGCATGTGGCAACGTCGTTATGCAGCCCTTTCTGATGGAGGAGAAAGCAGTCGGCTCATGCGGTAGTTTCATTTCCTCCGTAGTATTCCTTCCGGTCAGAGACAGAATAAAAAAACCCATCACCGCATCTTTCAAACTCACACCTACATAA
Protein Sequence: MASALIQMSCPDIRNALIHGMESVGYEDSMSDSDGKRRNSDQDDTDRGQSKKRRKQSNPIRITNAEPTGQVDLKMKNKSENNCNKIIADVGLASKMAEENVSSGSPTNDDTVDTTASYRTYMPGKEKVLDNSFKSATSDLIFPLNLSSLKASPKETTDSLMDDKQWYKMREGRSLFSVPPLDPLKVKSHFFQNNILLPPQSPTLALPSLKRIMVGNNEIPVNPSHRIFNPEAFCDLCNKEFCNKYFLKTHRANKHGIYSENTGSNLMDNLCTLPITNYLSNNNNNTNNNNNNGSLASTSPICPLIGKKPMQTLANTQAKSNSGSMRAYCNICQREFCNKYFVRRHKAKIHGIVDHQSDESQDQKSHLFQEKNDSSVIDLNLPGPSSSKSVSQIVKDPSVEISDERVCIKRELDLDIEDPYNSQSSLKYLVSSWNNEDVGDSSTSPDRLKKSGSSSNSAFCDICCKEYCNKYFLRIHKQKCHSSLSQEKEDNPLPSETPNSGDSPLNLILREIHKEPETIDFYCKVCHKTFATQILLNKHYEKMHEDKCCDNSSTQINSLISEQQQINSRSNQGNRSISDGSSDSMSETQMETYHTSTIQSDVQKIHSMITKMNHSEAKDYSFCEICLKDFHQTGLLENHIIREHSSLVEDMGSSFDDENIYSYPEGSKYDIEKSPRNSNLSNFTEEVVSTDQRPNDPNSQLKNGLENIENSSNGDRQALSTPTSSFCDICKKELCNKYFMKTHMQRMHGISIENGAQLGGVMCEICNKELCSKYFLRVHKQNSHGIVDENFLPQIGGNDIKLSVSTELPLKTKETAEINNRYFTHFAEVCSICGRRFRSTKWLKAHLLNDHGDEGKNKWKEVQALTGHKASDKTPTEPSKKAAFSPLYNLNMSSTEPDVTDLRVSTSDLFKSDRCNIEKQSDLVTNILNKNNTKLYKCSYCYFSTPILALLFIHERNHVPGTNEALRCPICFLVCESSEFLDKHVCCHRQQSEEPPEEERNTPIRYPTPIDYSSHDNIPSKQPLTDPTIPEDKFSDRFPHSQVSLKCHKCSYLTNDVDSFSRHIKSDHSTEVTDGESISLVSEILVKTSSNTSIPASFAVPGACGNVVMQPFLMEEKAVGSCGSFISSVVFLPVRDRIKKPITASFKLTPT*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00744175;
90% Identity: iTF_00744175;
80% Identity: -