Basic Information

Insect: Gerris buenoi
Gene Symbol: -
Assembly: GCA_001010745.2
Location: KZ654576.1:90535-116065[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 2.2 2.9e+02 3.8 5.7 1 23 414 437 414 437 0.90

2 17 0.0016 0.22 13.6 2.9 1 23 443 466 443 466 0.98

3 17 0.3 41 6.4 0.2 2 23 713 735 712 735 0.93

4 17 1.8 2.4e+02 4.0 0.2 3 17 854 869 852 870 0.91

5 17 0.21 29 6.9 0.4 2 23 1092 1114 1091 1114 0.93

6 17 0.00012 0.017 17.1 1.1 1 23 1139 1162 1139 1162 0.97

7 17 0.0079 1.1 11.4 0.9 1 23 1172 1195 1172 1195 0.98

8 17 0.0022 0.3 13.2 1.4 1 23 1201 1224 1201 1224 0.97

9 17 0.11 15 7.8 0.1 1 23 1230 1253 1230 1253 0.97

10 17 0.58 79 5.6 1.8 1 23 1259 1282 1259 1282 0.95

11 17 0.01 1.4 11.1 3.5 1 23 1288 1311 1288 1311 0.94

12 17 0.00011 0.015 17.2 3.8 1 23 1317 1340 1317 1340 0.96

13 17 5.2 7e+02 2.6 1.0 1 23 1348 1371 1348 1371 0.84

14 17 0.048 6.5 9.0 3.7 1 23 1377 1400 1377 1400 0.97

15 17 0.0047 0.63 12.1 0.4 1 23 1406 1429 1406 1429 0.96

16 17 0.33 44 6.3 2.1 1 23 1435 1458 1435 1458 0.92

17 17 1.3e-05 0.0017 20.2 2.0 1 23 1464 1487 1464 1487 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	2.2	2.9e+02	3.8	5.7	1	23	414	437	414	437	0.90
2	17	0.0016	0.22	13.6	2.9	1	23	443	466	443	466	0.98
3	17	0.3	41	6.4	0.2	2	23	713	735	712	735	0.93
4	17	1.8	2.4e+02	4.0	0.2	3	17	854	869	852	870	0.91
5	17	0.21	29	6.9	0.4	2	23	1092	1114	1091	1114	0.93
6	17	0.00012	0.017	17.1	1.1	1	23	1139	1162	1139	1162	0.97
7	17	0.0079	1.1	11.4	0.9	1	23	1172	1195	1172	1195	0.98
8	17	0.0022	0.3	13.2	1.4	1	23	1201	1224	1201	1224	0.97
9	17	0.11	15	7.8	0.1	1	23	1230	1253	1230	1253	0.97
10	17	0.58	79	5.6	1.8	1	23	1259	1282	1259	1282	0.95
11	17	0.01	1.4	11.1	3.5	1	23	1288	1311	1288	1311	0.94
12	17	0.00011	0.015	17.2	3.8	1	23	1317	1340	1317	1340	0.96
13	17	5.2	7e+02	2.6	1.0	1	23	1348	1371	1348	1371	0.84
14	17	0.048	6.5	9.0	3.7	1	23	1377	1400	1377	1400	0.97
15	17	0.0047	0.63	12.1	0.4	1	23	1406	1429	1406	1429	0.96
16	17	0.33	44	6.3	2.1	1	23	1435	1458	1435	1458	0.92
17	17	1.3e-05	0.0017	20.2	2.0	1	23	1464	1487	1464	1487	0.98

Sequence Information

Coding Sequence: ATGTCTGAGACTGATAGAAATTTAGCAATTATATATAATCAAGATCCTGATATAGATCCTCTAGCATTGGATGTAGAATCTGAACTCTTTgccaATATGTCTGAGACTGATAGAAATTTAGCAATTATATATAATCAAGATCCTGATGTAGATCCTCTGGCATTGGATGTAGAATCTGAACTCATTGtgaaTGAAGCGATTAAAAAGGATATTAAGGATTCATCACTCAATTACATTATTGTATCATCCTCTGATGATGAAGTTAAACCGAATGGTTTTAATGAAACCGACGATGAATTTAAGAATTCTTTTAATATACAGTATTCATCTCTTTCAGGCAATACTTTTCAATTGTCTTCCAGATTTAatgttaatcaaaatattaaaatcgaaGTTGAAACTGTGAACTGTAAAGAAGAATGTGATCCATCTTCATCAAGTGATGATAATATAGAATCTCCTTCTAATGAGGCGATTTCTTCTTCAGATGAATTCGTTGAAACTAATGTGGAATTGAAGGAACCCAAAAAAGAATTGTATGAGGATGCGGCCCAATCATCTTCCGATGTTAGATGCACTTCTAGTGGTGAATGTGACAATTCTACTGAATCTGATGGAATTTTGAACTTGTCAACTTTAGACACACTTTTCAGTGAAATGATGGATTACATGAAAAGTTGTAAACTAGAAATCAAGCCAATAGATGTTAACTTCAGCGGTGAGGACATCAAAGAAAATTGGTCAATTTGCGATAAAAATAACGGTAACAGTTCATTACAAAGTGATATCCCCGAGGGTGTTCGTTGTAATTTTACAACGaaaagttgtaaaattataCTCAAGCCTGTAGATGTAAACTCCAGCAAAGATGTCAAGGAATATCGGTCAATTTGTGATAAAGATGATGATTGCAGTttgttgaaaagtgatttttctGAAGGTGAAATTGCTTACATGAAAAGTTGTAGAATTGTACTCAAACCCGTAGATGTTAACTTCAGCGATGAGTGTGATGAGGAAAACGGGTCAATTTGCGATGAAACTAACGACAACAGTTCGCAGCAAAGTGATATCTGCGAAGGTGAACTCACCGACACTAAACGTTGttttgtaaaagttaaaaaattaaatgaatcgaAAGAACCAAAGAATATTGTTCGTCCCCATTGCAAATTCAGTAAACATTCTATCGATACCCTTCGTCCGCATGCTGCCAAAATGAATGCTGAATTTAGAGGTTTCTTCTGTCGGCATTGCAACCTTAAATTCAGCCATAAACTTTTCCTGCTCGAACATTATGCTGAGAAACATGAGGATGTGAGGCCTTATAAATGTTTTCATTGCAAAGTGAGTTGTATATCTAAAGTCGATCTGAAAGTTCACATCAATGTTGAACATATGAAGAAAAAACGATTTAAATGTCATATTTtgaaTGAAGCGATTAAAAAGGATATTAAGGATTCACCACTCAATTACATCATTCCATCATCCTCTAATGATTTAACTTCATCATCAGAGGAAGATGAAGTTAAACcgattggttttaataaaaccgACGATGAATTTAAGAATTCTTTTAATATACAGTATTCATCTCTTTCAGGCGGTACTTTTCAATTATCTTCCAGTTTGAACGttaaccaaaatattaaaatcgaaGTTGAAACTGTGAACTGTAAAGAAGAATGTGACCCATCTTCATCAAGTAGTGATAATATAGAATCACCTTCTAATGATGCAATTTCTTCCTCGATCAAATTTGATGAAACTAAAGTGGAATTGAAGGAACCCAAAAAAGAATGGTATGAGGATGCGGCCCAATCATCTTCCGATGTTAGATGCACTTCTAATGGTAATTGTGATGATTCTACTGAATCTGATGGAGTCTTGAACTTGTCAACTTTGGACACACTTTTCAGTGAAACGATGGATTACATGAAAAGTTGTAAACTAGAAATCAAGCCTCTAGATGTTAACTTCAGCGATGAGGGCACGGAGGAAAATTGGTCAAATTGCAATGAAAATAACGATAACTATTCAATGCAAAGAGATATCTCCGAAGGCGAACTCCTTTATATGAAAAGTTGTTTtgtaaaactcaaaaaattaaatgaatctaAAGAGCCAAAGGATTTAGTATGTTCCTATTGTGAATTTAGTACGAATTCAGTTGATACCCTTCGTTTGCATGCTGCCAAAATGCATCCTCAATTTAAAGatttaaaagGGAATATTTCTCAGAATGTGGATGCCGCTGTGATAAGTGATATTTGTACTTCACGGAGTCAAACTAGAGAACAAAGACTGAATGTAACAATTAAAATGGATATTAAGGATTCATCACGCAATTACATCATTCCATCATCCTCTGATGATAAAATGATAACTACATCATCATCAGAAGATGATGAAGTTGAACCGACTGGTTTTGAAGGAACcaacaatgaatttaaaaattattttaataaacggTATTCATCTGTTCCAGGCGGTAGTTTGCGATTATCATCCAGATTTAACCTTAACCAAAGTATTAAAGTCAAAGTTGAAACTGTGAATTGTAAAGAAGAATGTGATACATCTTCATCAAGTAGTGATAATTTAGAATCACCTTCTAATGAGGCGATTTCTTCTTCTGATGAATTTGATGAAACTAATGTGGAATTAAAGGAACCCAAAAAAGAATGCTATGAGGATGCGGCCCAATCATCTTCCGATGTTAGATGCACTTCTAATGATGAATGTGATAATTCTACTGCATCTGATGGAATCTTGAACTTGTCAACTTTGGACACACTTTTCAGTGAAATGATGGATTACATGAAAAGTTGTAAATTAGAACTCAAGCCTATAGATGTTAACTTCGGTGATGAGGACAATAACGATGAAAATAACAGCAACAGTTTGTTGCAAAGTGATTTCTCTGAAGGTGAAATTGCTTACATGAAAAGTTGTAAAATTGTACTCAAGCCTGTAGATGTTTCCTCTAGCAAAGAAGATGCCAAGGAATATGAAAATGATAATTACAGTTTCTTGCaaagtgatttttctgaaagtgAAATTGCTTACATGAAAAGTTGTAGAATTGTACTCAAGCCCGTAGATGTAAATTTCTGCGATGAGGTCACTAAGGAAAATTGGCCAATTTGTGATGGAAATATTGATAACAGTTCATTGCAAAGAGATATCTCTGAAGGTGAATTCCCTTACATGAAACGTTGTTTTGTAAAAGTCAAAAAAGTAAATGAACTGAAAGAGCCAGTATATTGTTTAGTATGCTCCTATTGTAAATTCAGTACGAATTCAGTCGATACCCTTCGTCTGCATGCTGCCAAAATGCATGCTGAATTTAAAGGTACTTACAAAGGTGCAGTGGATAGGCATTGGAAAAAGGtacatttacaaattaaaaaattcaaatgttcTCTTTGTAAAAAGGCATTTTTCGATACGACTGGATTGCAAAAGCATATTAATTCTGTACATTTTAAAACGAATGTGAAAATAAAACCTTATAAATGTGAGATTTGCGGTTTTCGCTCTGCTAATTCTTGTGACATTGATAGACATGTGAGGACAGTTCATCGCAAAGAACGACCGTACCAATGTCACTACTGTGGTCTTCGAGTGGGTGAAAAGGGACAGCTTTCTCACCACATTAAGGAGGTTCATATGAAGATCAAGCCCTTTAAATGTTCACTTTGCAGCTATCGTGCAGCTCGTAATGATGCTATTAGAGTCCATATTATCTCAGTCCATGAAAAAGAACGTCCACATAAATGTCCGCACTGTAATTATAGAGCAGCTATAAAGAGTAGAGTCGACACTCACATCAGAATGGTCCAtaatcaagaaaagaaacacGTGTGTGATCACTGCGGACGTTGTGGCACTTCAAAGTACGCTATTAGGAAGCACATTAGTGAAGTTCATTTGCTTCGTAAACCCTATAAATGCACTCATTGCAGTCGTAGATTCGCTAGGAAAGACACTCTTAAAGGCCATATTAAGTTTATTCATTGTTGCGGTCAAGAACGACCGTATCAATGTCACTACTGTGTTTATCGAGCAGGTGCAAAGGGAGATATTTCTCACCATATTAAGGCTGTTCATATGAAGATCAAGCCCTTTAAATGTCCACTTTGCAGCTATCGTGCATCTCATAAAGGACATACAAAACAGCACATCAATTCTGTCCATAAGAAAGACCGTCGGTATAAATGTCCGTACTGTGATTATAGAACGGCTATAAAGAGTAGTCTCAGACCTCACATCAAAAATGTCCATAATCGAGAAAAGAATCACTCTTGTGATCACTGTGGATATCGTGGGTTCTCAAAGACCCTTGTTAAGAATCACATTAGTGCAGTTCACCTGCGACGTAAACCTTATAAATGCACTCAATGCAGTCGTAGATTCGGTAGGAAAGACTCTCTTAAAGTCCATATTAAGAAAGTGCATCCAGATAAATGA
Protein Sequence: MSETDRNLAIIYNQDPDIDPLALDVESELFANMSETDRNLAIIYNQDPDVDPLALDVESELIVNEAIKKDIKDSSLNYIIVSSSDDEVKPNGFNETDDEFKNSFNIQYSSLSGNTFQLSSRFNVNQNIKIEVETVNCKEECDPSSSSDDNIESPSNEAISSSDEFVETNVELKEPKKELYEDAAQSSSDVRCTSSGECDNSTESDGILNLSTLDTLFSEMMDYMKSCKLEIKPIDVNFSGEDIKENWSICDKNNGNSSLQSDIPEGVRCNFTTKSCKIILKPVDVNSSKDVKEYRSICDKDDDCSLLKSDFSEGEIAYMKSCRIVLKPVDVNFSDECDEENGSICDETNDNSSQQSDICEGELTDTKRCFVKVKKLNESKEPKNIVRPHCKFSKHSIDTLRPHAAKMNAEFRGFFCRHCNLKFSHKLFLLEHYAEKHEDVRPYKCFHCKVSCISKVDLKVHINVEHMKKKRFKCHILNEAIKKDIKDSPLNYIIPSSSNDLTSSSEEDEVKPIGFNKTDDEFKNSFNIQYSSLSGGTFQLSSSLNVNQNIKIEVETVNCKEECDPSSSSSDNIESPSNDAISSSIKFDETKVELKEPKKEWYEDAAQSSSDVRCTSNGNCDDSTESDGVLNLSTLDTLFSETMDYMKSCKLEIKPLDVNFSDEGTEENWSNCNENNDNYSMQRDISEGELLYMKSCFVKLKKLNESKEPKDLVCSYCEFSTNSVDTLRLHAAKMHPQFKDLKGNISQNVDAAVISDICTSRSQTREQRLNVTIKMDIKDSSRNYIIPSSSDDKMITTSSSEDDEVEPTGFEGTNNEFKNYFNKRYSSVPGGSLRLSSRFNLNQSIKVKVETVNCKEECDTSSSSSDNLESPSNEAISSSDEFDETNVELKEPKKECYEDAAQSSSDVRCTSNDECDNSTASDGILNLSTLDTLFSEMMDYMKSCKLELKPIDVNFGDEDNNDENNSNSLLQSDFSEGEIAYMKSCKIVLKPVDVSSSKEDAKEYENDNYSFLQSDFSESEIAYMKSCRIVLKPVDVNFCDEVTKENWPICDGNIDNSSLQRDISEGEFPYMKRCFVKVKKVNELKEPVYCLVCSYCKFSTNSVDTLRLHAAKMHAEFKGTYKGAVDRHWKKVHLQIKKFKCSLCKKAFFDTTGLQKHINSVHFKTNVKIKPYKCEICGFRSANSCDIDRHVRTVHRKERPYQCHYCGLRVGEKGQLSHHIKEVHMKIKPFKCSLCSYRAARNDAIRVHIISVHEKERPHKCPHCNYRAAIKSRVDTHIRMVHNQEKKHVCDHCGRCGTSKYAIRKHISEVHLLRKPYKCTHCSRRFARKDTLKGHIKFIHCCGQERPYQCHYCVYRAGAKGDISHHIKAVHMKIKPFKCPLCSYRASHKGHTKQHINSVHKKDRRYKCPYCDYRTAIKSSLRPHIKNVHNREKNHSCDHCGYRGFSKTLVKNHISAVHLRRKPYKCTQCSRRFGRKDSLKVHIKKVHPDK*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -