Gbue013834.1
Basic Information
- Insect
- Gerris buenoi
- Gene Symbol
- bab2
- Assembly
- GCA_001010745.2
- Location
- KZ651284.1:223333-234869[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.7e-18 4.4e-15 56.7 0.0 2 43 277 319 276 321 0.96
Sequence Information
- Coding Sequence
- ATGGCAGTCCAGCAGTTTTGCCTGAGATGGAATAACCATCAGCCTAACTTTATTTCTGTGTTTACGGATCTGCTGAACAATGAAACGTTGGTAGACGTTACATTAGCAGCTGAAGGAAAACAGTTACAAGCTCACAAAGTGGTTTTATCTGCATGTAGCACTTATTTCCAGGCTCTGTTCACAAGCACACCTTGTCAACATccaatagttattttaaaggaTATAAAATATTCTGATTTAAAAACTATGGTGGATTTTATGTATTATGGCGAAGTCAATGTATCTCAGGACCAGTTACCTGCAATCCTCAAGACGGCTGAAACCTTGAAGGTTAAAGGACTGGCTGAGATGCCTGAAGGAGTTTCCCTCTCTAAATCTGACTCCCAAGGTAGTGAATCACCTTGGTCATTAAGACGAAAGCGTCTACGGAAGTCTTCTACTGGATCAAGTGAGCAGACTTCAACTGAAGATGGTGCAGCTGGATCGGTGGGATCTGGCGGTACCCTGGCCACACCTTCACCCCTTGTTAAACAGGAAATTGAATCTGAACATCATCCTCCTCCCCCTACCAGAGACCCTTCTACTGAATCCGATACTGCCAGGTCTCACTCTTTTGACACTGATGACCAAACACCTGCTACACCATCGcGAAACCTTTCTGAAGAACAGTCTGATACCAGCAATATAAAATGGAGTTCATCTGAGGAACAGAAGCCAAGTCTAATTCAACAACTTCCTGGGTGGGACGGTCCTTTGGAGTGGGAACAGTCGAGTTGGGATCAGGACACTGTGAGTGCCAAGAGGAAGAGATCTGTGAACCCTCAGGGAGAAGAAAATTTCATTGCAGCTCTGGAAGCCGTTCGTTCTGGCAGATTGGGATTTTGTAAAGCGGCTAAAGTCTATGGTGTTAATAACAGGACCCTTTGGTTAGAGTATAAACGGAGGGGATATCCACTAATACGACCTTCTACCAAGGCAAAATCTCAACAATTGGCTGCATCTCAGGGCTTAAAACCTTGTATTCAGAATGATCACTTAATATCATCACCTGATCTTAACGGTTCCCTTACTCCCTCTCCCTCACCTAAACAACAAATTGAACCTGTTCCTACGCCCACTTCCCTACAGCCCTCTTGTTTCACCCAGTCACCATTCTTGAATAGGTTCCCTCCTAAATATGAGCAACCCATTGATCCAAAATATGATCCATCTAATCCTCCTCCTTATTATTTGTACAGTACCCTGTAA
- Protein Sequence
- MAVQQFCLRWNNHQPNFISVFTDLLNNETLVDVTLAAEGKQLQAHKVVLSACSTYFQALFTSTPCQHPIVILKDIKYSDLKTMVDFMYYGEVNVSQDQLPAILKTAETLKVKGLAEMPEGVSLSKSDSQGSESPWSLRRKRLRKSSTGSSEQTSTEDGAAGSVGSGGTLATPSPLVKQEIESEHHPPPPTRDPSTESDTARSHSFDTDDQTPATPSRNLSEEQSDTSNIKWSSSEEQKPSLIQQLPGWDGPLEWEQSSWDQDTVSAKRKRSVNPQGEENFIAALEAVRSGRLGFCKAAKVYGVNNRTLWLEYKRRGYPLIRPSTKAKSQQLAASQGLKPCIQNDHLISSPDLNGSLTPSPSPKQQIEPVPTPTSLQPSCFTQSPFLNRFPPKYEQPIDPKYDPSNPPPYYLYSTL*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00743878; iTF_00742926; iTF_00743600;
- 90% Identity
- iTF_00743878; iTF_00742926; iTF_00743600;
- 80% Identity
- iTF_00742926;