Basic Information

Insect: Germaria angustata
Gene Symbol: -
Assembly: GCA_963681545.1
Location: OY813002.1:21402083-21413547[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.14 17 7.4 3.3 2 20 474 492 474 494 0.94

2 10 0.15 19 7.2 3.9 2 21 932 951 932 952 0.94

3 10 2 2.5e+02 3.7 2.8 1 16 962 977 962 985 0.85

4 10 0.21 27 6.8 1.3 1 23 990 1013 990 1013 0.91

5 10 0.0066 0.84 11.5 2.7 1 23 1023 1045 1023 1045 0.98

6 10 0.00041 0.051 15.3 2.9 1 23 1050 1072 1050 1072 0.99

7 10 2.8e-05 0.0035 19.0 0.1 1 23 1078 1100 1078 1100 0.98

8 10 0.0034 0.43 12.4 0.9 2 23 1106 1127 1105 1127 0.95

9 10 0.1 13 7.7 1.9 1 23 1165 1188 1165 1188 0.92

10 10 0.00011 0.013 17.1 4.9 2 23 1195 1217 1194 1217 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.14	17	7.4	3.3	2	20	474	492	474	494	0.94
2	10	0.15	19	7.2	3.9	2	21	932	951	932	952	0.94
3	10	2	2.5e+02	3.7	2.8	1	16	962	977	962	985	0.85
4	10	0.21	27	6.8	1.3	1	23	990	1013	990	1013	0.91
5	10	0.0066	0.84	11.5	2.7	1	23	1023	1045	1023	1045	0.98
6	10	0.00041	0.051	15.3	2.9	1	23	1050	1072	1050	1072	0.99
7	10	2.8e-05	0.0035	19.0	0.1	1	23	1078	1100	1078	1100	0.98
8	10	0.0034	0.43	12.4	0.9	2	23	1106	1127	1105	1127	0.95
9	10	0.1	13	7.7	1.9	1	23	1165	1188	1165	1188	0.92
10	10	0.00011	0.013	17.1	4.9	2	23	1195	1217	1194	1217	0.96

Sequence Information

Coding Sequence: atgcgTTGGTGTGCTGTGTGCAAGAAGAGTTTTGAGAAGGGAACTGGCAATTTGTTTACTGTGCCAAGTGATGAAGCCAATAGAAGAAAGTGGGGTGAAATTGTTGGAAAAAATCTTAAACCAAGCTCGAGAATATGTAGTGTTCACTTTTTGCCATCGAGCCTTGTACGAGTTGGAAGAAGAATATCCCTTATGCCAAATGCCGAGCCTCTCCGTAAGCAAATGCAGAAGGTTGAATGTGTGCCTTGGGATGAAATTTCAGCAAATGATATATGTAAATCATCAGATTCAAAaaaaaatattgatgcTGCATCAAAGAAATCGGAGATTgatgtttttgaaaatcaaaaggAGGAATTTTCGCAACATTTAGTAAATCTACAAAAAAATGTGCCTGCTGcacaaataaaagataaaccTATAATTGAAATACCAGTACTAACTCAGCAACTTCAAGAAGAACCGATAATAGAGATTCCTATTGCCAAATCGATTTCTTGTGCAGGCTTTACTCAAACTAACACAAGGTTTTGTGGCTTAGTGGAAGCCGTAGAATTATCTGACGAATTCCGTTTAAATTGCTTCTATTGTTCTGAAGTATTTCCAttggaaaaatggaaatttttcacaaatcatCTAAGAGACAACCATTTTGAAATAGAAGAAGGATTCAAAACTTGCGAATATGTTTCCAAAGACCATGATTACACTTTCAAGGGCTTAACTCCATCGACTGCAGAAGAGACTCCTATCGAAACGGTTGTTATTAATTCCAAAGACCCACTGGAATCTACATATGGCCCATTTGAATCTGTGGTTTTAAATTCTTCTATTTATTATAgcaattatgaaaacaaaactgTTTCCAACGAAATTTCAACCCCCTTGATTGATACTGAAAGTACAAACACAATTACTGAAAAGACAGGAGAACTGAGCAGCTATAAGAAAATTGAAAGTAATTCAAAGaacacatttaaaaaaacagcTTTAAGTCGCTTTCTTAGAAGAACAAATGAGGTAGAAGAAATTGAGATAGAAGAAAAGCTAGAATATGAAACAAATTCTATTGATATTGTTCGACAAAATCCCACAGAGATTTCTTTCGAATATACATCATGTGACatagtgaattttttattggatAATATGAAACATTATCCAATATTGTGGCAGTTCGACGGTGTACCGTTCAATGAACACTTTTATGAAGCTGTCGAAGATCTATGTAAATCAGTTAATGAGAAATGGTCAATGAATATTGACAATTTAAGAATGCGACGTAGCATAAATCGTATACTAAGATTTTACTGTTACTTATTTCCAAATGAAAGCGTTGAAAACATTGACCAATATACTAGTTATTATGACAAATGTGCTACTTTTCTGCCTCCTTCTGTTAATGAAATTGCATATGCTCGTTGTTCACACTGTTTTATATGTTACAAAAATGACTTCGACTTGAAACGTCACCTATTAGAAGAATATAAGTGTTTGCAATGGCCCTACAAaaaaactgTTAATGTTGCTGTAGCTAAAAGTGGGagtaaaaaaatatcgaaaaacaaaaaaggcCTATCgacagaaaataaattgatttcaaataacAATGTGTTGTCCCCTCCACAAACACAAGAGAATCTTTTAATGGAAATACCGGTAAGAAAATCGGTTTTTTGCACAGGGTCAACACAAACCAACATTCGTCTTTGTGGATTAGTACAAGCTTCAGAATTCGCAGATGAATTTCGCCTTAATTGCTTCTATTGTTCTGAAGTATTTCCATTGGAAAAAtgtaaagattttataaatcatttaaagaaaaaacattttgaaaaagaaaaagcatTTGAAGTTTCCGAATATGTTTCTGATGAACACGATTATGCTCCTATTAACTTGCCGTCCTCCACAAAAGCAGTGCCGGATTTTGAAACTATTGGTATTAATGTTGAATCAGTGTTGCCCTATATAGTGGATGCAGATGAACCAATACATAACCCAATTGATTCTGTAGTTGTAAATCCAAATTTCTGTTATACCACGGATGGTAATGGGATGCTTCCCAATAACATAGATATATTAAATTACTTGATTGATTGTGGTAGCCCCTTAGTTGTGTTGGACTCAGAGGAACAAAACCCATTGGTATCTATGGATTTGAAACCCACTTTTTATTGCACACaagataacaattttaataaaactaaaaaatcatCAATTACAAAGCCGTCATGTGGAGTAATGACCAAATTTACCAGTTCTAAAAAAGACTCACAAATTAACTTCCTACCACATTATGTTAAGAACGAAAAAAATAAGTCCACTAAAGAGAGgaatttaaacataaacacTAGGAGAAACAAATTGATGGCATCCAGAAATACCGCTTTAAGTCGTTGTCTTAAAAGGACATATAAAGAGAAGGAAGAATCTAGTACTACTAAAATTGACCAACAGAAGCCTACAGAAATTTCGTTTGAATATACACCACGGGTTATAGTAGATTTGTTGTTGGATAGTATGAAAATTTATCCAGTTCTGTGGCAATTTAATAACGAGCCATTTAGTGAAGAGTTTTGTAAAGCAATCGaagatttatgtaaaataataaacgaCAAATGGTCGCTGAATATTGATAACTTAAAAATGCGACGTAGCATTAATCGTATACTAAGATTTTATTGCTACTTATTTccaaatgaaaatgttgaaaatattcatcAGTATACTTGCTATTATGACAAATGTGCTGCTTTTCTGCCTTCTTCTGTAAATGAAATTGCTTATGCACGCTGTTCTCATTGTTATATATGTtacaaaaatgattttgatttgAAGCGTCACCtgttaaaagaacaaaaatacaatttacagTGGCCGTACAAGTGCGTGCAATGCAAGGAATGTTTCAGAGAAAGTGATGAATATGACTTTCACAAACTTCTGTCACATTACGATGAAATCTTTAGGTGTGAACCgtgtaataagaaatttattcgcCGTAATATATACAACAGACATATGGTAGAATACCACTCAAGCGTTCGTAAGGAGCCAGGAAAATATAAATGTGATCTATGCGACAAAGAATTTGGTACTATTCATCGTTTAAGGTATCATAAAATCACTCACGGCGAAAGAAAATACAAGTGTCATCTATGTCCGAAGTCTTACTTTGCGAATTCAAAACTGAGGCTTCATTTAAAGATTCATCGAAGAGAATATGATTTTATGTGTGAAGTGTGTGGAAAGGCATTTCCCCTTCAAGCACCTCTAAAGatacatatgaaaaaacatactggagaaaaaattacatgtagTATATGTAACTTGAAATTAAGAAAGTCGAGCCTAAGCCGGCATATGCGATTACTTCATGGTTCAAATGAAGGCAAAGTCAGAAAGAGAGTATCAGGAAGACATGTTAACTATAAGAGTTTGATAAGACCAACGCCATATAGACGAAGGAAGGAATGTGAAGGAAGAAATTACCATTGCAAAATCTGTGAAATGAGATTTGACAAATATAAACTACTTGCCGAACACAACAAAGAGTTACATTCCGATATCCCGAAATTGTCATGTAAAATGTGCAGTACCGCATTTAGACATAAAGTGAATCTCAAGCGTCACTATCGCAGAAAGCATAATTTACATGTAATTCAAGCTTACAAATTGGTAGAAGAGAATGAAGACTTAAATGAAGTGTTAGCTATTGAAATggaacatttaaataatttggcgGGATATCCTTCAAAGAAAACCACAATAATAAAATCGGAATTTTTGCCAGATGAAATTTCGTTTGAAGAGGAAAAACTTCAAAGTTTTACGATAGAAGATGAAATCATAAAAACTGCCGATAATATCGctaaagaagaaattaaaattgactATATAAGTGAGTTTTTCGATATATCTTAA
Protein Sequence: MRWCAVCKKSFEKGTGNLFTVPSDEANRRKWGEIVGKNLKPSSRICSVHFLPSSLVRVGRRISLMPNAEPLRKQMQKVECVPWDEISANDICKSSDSKKNIDAASKKSEIDVFENQKEEFSQHLVNLQKNVPAAQIKDKPIIEIPVLTQQLQEEPIIEIPIAKSISCAGFTQTNTRFCGLVEAVELSDEFRLNCFYCSEVFPLEKWKFFTNHLRDNHFEIEEGFKTCEYVSKDHDYTFKGLTPSTAEETPIETVVINSKDPLESTYGPFESVVLNSSIYYSNYENKTVSNEISTPLIDTESTNTITEKTGELSSYKKIESNSKNTFKKTALSRFLRRTNEVEEIEIEEKLEYETNSIDIVRQNPTEISFEYTSCDIVNFLLDNMKHYPILWQFDGVPFNEHFYEAVEDLCKSVNEKWSMNIDNLRMRRSINRILRFYCYLFPNESVENIDQYTSYYDKCATFLPPSVNEIAYARCSHCFICYKNDFDLKRHLLEEYKCLQWPYKKTVNVAVAKSGSKKISKNKKGLSTENKLISNNNVLSPPQTQENLLMEIPVRKSVFCTGSTQTNIRLCGLVQASEFADEFRLNCFYCSEVFPLEKCKDFINHLKKKHFEKEKAFEVSEYVSDEHDYAPINLPSSTKAVPDFETIGINVESVLPYIVDADEPIHNPIDSVVVNPNFCYTTDGNGMLPNNIDILNYLIDCGSPLVVLDSEEQNPLVSMDLKPTFYCTQDNNFNKTKKSSITKPSCGVMTKFTSSKKDSQINFLPHYVKNEKNKSTKERNLNINTRRNKLMASRNTALSRCLKRTYKEKEESSTTKIDQQKPTEISFEYTPRVIVDLLLDSMKIYPVLWQFNNEPFSEEFCKAIEDLCKIINDKWSLNIDNLKMRRSINRILRFYCYLFPNENVENIHQYTCYYDKCAAFLPSSVNEIAYARCSHCYICYKNDFDLKRHLLKEQKYNLQWPYKCVQCKECFRESDEYDFHKLLSHYDEIFRCEPCNKKFIRRNIYNRHMVEYHSSVRKEPGKYKCDLCDKEFGTIHRLRYHKITHGERKYKCHLCPKSYFANSKLRLHLKIHRREYDFMCEVCGKAFPLQAPLKIHMKKHTGEKITCSICNLKLRKSSLSRHMRLLHGSNEGKVRKRVSGRHVNYKSLIRPTPYRRRKECEGRNYHCKICEMRFDKYKLLAEHNKELHSDIPKLSCKMCSTAFRHKVNLKRHYRRKHNLHVIQAYKLVEENEDLNEVLAIEMEHLNNLAGYPSKKTTIIKSEFLPDEISFEEEKLQSFTIEDEIIKTADNIAKEEIKIDYISEFFDIS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00741933;
90% Identity: iTF_00741933;
80% Identity: iTF_00741933;